RNA–Protein interactions for RNA: YDR115W

YDR115W, Transcript of Putative mitochondrial ribosomal protein of the large subunit, yeast

Gene YDR115W, Length 318 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR115W	YDR115W	YLR460C	P54007	376 aa		0.99	□□□□□ -2.25
YDR115W	YDR115W	ARO80	Q04052	950 aa		0.99	□□□□□ -2.25
YDR115W	YDR115W	YDR391C	Q04170	232 aa		0.99	□□□□□ -2.25
YDR115W	YDR115W	ADF1	Q2V2Q1	113 aa		0.99	□□□□□ -2.25
YDR115W	YDR115W	YLR412C-A	Q3E742	68 aa		0.99	□□□□□ -2.25
YDR115W	YDR115W	MRPL15	P36523	253 aa		0.98	□□□□□ -2.25
YDR115W	YDR115W	NSG1	P38837	291 aa		0.98	□□□□□ -2.25
YDR115W	YDR115W	YFL019C	P43576	117 aa		0.98	□□□□□ -2.25
YDR115W	YDR115W	LCL2	Q08045	131 aa		0.98	□□□□□ -2.25
YDR115W	YDR115W	YPR014C	Q6B0W2	109 aa		0.98	□□□□□ -2.25
YDR115W	YDR115W	YCR023C	P25351	611 aa		0.97	□□□□□ -2.25
YDR115W	YDR115W	NRK1	P53915	240 aa		0.97	□□□□□ -2.25
YDR115W	YDR115W	RRP17	Q04031	235 aa	Predicted RBP	0.97	□□□□□ -2.25
YDR115W	YDR115W	SMD2	Q06217	110 aa	Known RBP	0.97	□□□□□ -2.25
YDR115W	YDR115W	YOR015W	Q12169	119 aa		0.97	□□□□□ -2.25
YDR115W	YDR115W	SLH1	P53327	1967 aa	Known RBP	0.97	□□□□□ -2.25
YDR115W	YDR115W	URA2	P07259	2214 aa	Known RBP	0.96	□□□□□ -2.26
YDR115W	YDR115W	YBR242W	P38331	238 aa		0.96	□□□□□ -2.26
YDR115W	YDR115W	PGA1	P53896	198 aa		0.96	□□□□□ -2.26
YDR115W	YDR115W	GRX5	Q02784	150 aa		0.96	□□□□□ -2.26
YDR115W	YDR115W	STF2	P16965	84 aa		0.95	□□□□□ -2.26
YDR115W	YDR115W	CAF4	P36130	643 aa		0.95	□□□□□ -2.26
YDR115W	YDR115W	MAK5	P38112	773 aa	Predicted RBP	0.95	□□□□□ -2.26
YDR115W	YDR115W	NSA2	P40078	261 aa	Known RBP	0.95	□□□□□ -2.26
YDR115W	YDR115W	ATG10	Q07879	167 aa		0.95	□□□□□ -2.26
YDR115W	YDR115W	YPR203W	Q08994	102 aa		0.95	□□□□□ -2.26
YDR115W	YDR115W	DAS2	Q12084	232 aa		0.95	□□□□□ -2.26
YDR115W	YDR115W	YOR342C	Q12182	319 aa		0.95	□□□□□ -2.26
YDR115W	YDR115W	CCW14	O13547	238 aa		0.94	□□□□□ -2.26
YDR115W	YDR115W	MAK31	P23059	88 aa		0.94	□□□□□ -2.26
YDR115W	YDR115W	ADE1	P27616	306 aa		0.94	□□□□□ -2.26
YDR115W	YDR115W	YBL010C	P32788	280 aa		0.94	□□□□□ -2.26
YDR115W	YDR115W	UBC6	P33296	250 aa	Predicted RBP	0.94	□□□□□ -2.26
YDR115W	YDR115W	GPI14	P47088	403 aa	Known RBP	0.94	□□□□□ -2.26
YDR115W	YDR115W	EMC4	P53073	190 aa		0.94	□□□□□ -2.26
YDR115W	YDR115W	MET31	Q03081	177 aa		0.94	□□□□□ -2.26
YDR115W	YDR115W	PIR1	Q03178	341 aa		0.94	□□□□□ -2.26
YDR115W	YDR115W	DIG2	Q03373	323 aa	Known RBP	0.94	□□□□□ -2.26
YDR115W	YDR115W	DGK1	Q12382	290 aa		0.94	□□□□□ -2.26
YDR115W	YDR115W	SEN2	P16658	377 aa		0.93	□□□□□ -2.26
YDR115W	YDR115W	TAH1	P25638	111 aa	Predicted RBP	0.93	□□□□□ -2.26
YDR115W	YDR115W	FMP32	P43557	207 aa		0.93	□□□□□ -2.26
YDR115W	YDR115W	SBH2	P52871	88 aa		0.93	□□□□□ -2.26
YDR115W	YDR115W	NOC4	Q06512	552 aa	Predicted RBP	0.93	□□□□□ -2.26
YDR115W	YDR115W	ATP20	Q12233	115 aa		0.93	□□□□□ -2.26
YDR115W	YDR115W	PST2	Q12335	198 aa	Known RBP	0.93	□□□□□ -2.26
YDR115W	YDR115W	CDC39	P25655	2108 aa	Known RBP	0.92	□□□□□ -2.26
YDR115W	YDR115W	AHT1	P29589	182 aa		0.92	□□□□□ -2.26
YDR115W	YDR115W	SHG1	P38337	142 aa		0.92	□□□□□ -2.26
YDR115W	YDR115W	MPM1	P40364	252 aa		0.92	□□□□□ -2.26
YDR115W	YDR115W	AIM34	Q03673	198 aa		0.92	□□□□□ -2.26
YDR115W	YDR115W	FYV12	Q08559	129 aa		0.92	□□□□□ -2.26
YDR115W	YDR115W	MPD1	Q12404	318 aa	Known RBP	0.92	□□□□□ -2.26
YDR115W	YDR115W	YMR030W-A	Q3E760	96 aa		0.92	□□□□□ -2.26
YDR115W	YDR115W	TAR1	Q8TGM6	124 aa		0.92	□□□□□ -2.26
YDR115W	YDR115W	TRX3	P25372	127 aa		0.91	□□□□□ -2.26
YDR115W	YDR115W	YKL102C	P34249	101 aa		0.91	□□□□□ -2.26
YDR115W	YDR115W	NSE4	P43124	402 aa		0.91	□□□□□ -2.26
YDR115W	YDR115W	YGL235W	P53071	178 aa		0.91	□□□□□ -2.26
YDR115W	YDR115W	DML1	Q03652	475 aa		0.91	□□□□□ -2.26
YDR115W	YDR115W	YHP1	Q04116	353 aa		0.91	□□□□□ -2.26
YDR115W	YDR115W	YLR046C	Q12253	270 aa		0.91	□□□□□ -2.26
YDR115W	YDR115W	STT4	P37297	1900 aa		0.9	□□□□□ -2.27
YDR115W	YDR115W	UGX2	P32772	223 aa		0.9	□□□□□ -2.27
YDR115W	YDR115W	ETR1	P38071	380 aa		0.9	□□□□□ -2.27
YDR115W	YDR115W	RRT1	P38192	103 aa		0.9	□□□□□ -2.27
YDR115W	YDR115W	UPS1	Q05776	175 aa		0.9	□□□□□ -2.27
YDR115W	YDR115W	GRX8	Q05926	109 aa		0.9	□□□□□ -2.27
YDR115W	YDR115W	SHH4	Q06236	168 aa		0.9	□□□□□ -2.27
YDR115W	YDR115W	Q0297	Q9ZZV8	51 aa		0.9	□□□□□ -2.27
YDR115W	YDR115W	BLM10	P43583	2143 aa		0.89	□□□□□ -2.27
YDR115W	YDR115W	AHC2	P25649	128 aa		0.89	□□□□□ -2.27
YDR115W	YDR115W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.89	□□□□□ -2.27	not detected
YDR115W	YDR115W	YHL037C	P38733	133 aa		0.89	□□□□□ -2.27
YDR115W	YDR115W	YIL102C	P40488	101 aa		0.89	□□□□□ -2.27
YDR115W	YDR115W	SBH1	P52870	82 aa		0.89	□□□□□ -2.27
YDR115W	YDR115W	YPR114W	Q06107	315 aa		0.89	□□□□□ -2.27
YDR115W	YDR115W	YET3	Q07451	203 aa		0.89	□□□□□ -2.27
YDR115W	YDR115W	HSP30	P25619	332 aa		0.88	□□□□□ -2.27
YDR115W	YDR115W	YIL086C	P40503	102 aa		0.88	□□□□□ -2.27
YDR115W	YDR115W	DCV1	P43595	202 aa		0.88	□□□□□ -2.27
YDR115W	YDR115W	HHT1	P61830	136 aa		0.88	□□□□□ -2.27
YDR115W	YDR115W	HPT1	Q04178	221 aa	Known RBP	0.88	□□□□□ -2.27
YDR115W	YDR115W	FIT1	Q04433	528 aa		0.88	□□□□□ -2.27
YDR115W	YDR115W	GAL83	Q04739	417 aa		0.88	□□□□□ -2.27
YDR115W	YDR115W	ATG41	Q12048	136 aa		0.88	□□□□□ -2.27
YDR115W	YDR115W	PEX11	Q12462	236 aa		0.88	□□□□□ -2.27
YDR115W	YDR115W	CCS1	P40202	249 aa	Known RBP	0.87	□□□□□ -2.27
YDR115W	YDR115W	YFL051C	P43552	160 aa		0.87	□□□□□ -2.27
YDR115W	YDR115W	HOP2	P53187	214 aa		0.87	□□□□□ -2.27
YDR115W	YDR115W	VPS28	Q02767	242 aa		0.87	□□□□□ -2.27
YDR115W	YDR115W	GPI17	Q04080	534 aa		0.87	□□□□□ -2.27
YDR115W	YDR115W	YOR381W-A	Q3E804	55 aa		0.87	□□□□□ -2.27
YDR115W	YDR115W	FMP49	A0A023PZB3	126 aa		0.86	□□□□□ -2.27
YDR115W	YDR115W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
YDR115W	YDR115W	SEC14	P24280	304 aa	Known RBP	0.86	□□□□□ -2.27
YDR115W	YDR115W	YAR064W	P39563	99 aa		0.86	□□□□□ -2.27
YDR115W	YDR115W	RFC2	P40348	353 aa		0.86	□□□□□ -2.27
YDR115W	YDR115W	ELP6	Q04868	273 aa		0.86	□□□□□ -2.27
YDR115W	YDR115W	YPR127W	Q06494	345 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms