RNA–Protein interactions for RNA: YDL149W

ATG9, Transcript of Transmembrane protein involved in forming Cvt and autophagic vesicles, yeastyeast

Gene ATG9, Length 2,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG9YDL149W GAA1P39012 614 aa1.5□□□□□ -2.17
ATG9YDL149W NSA2P40078 261 aaKnown RBP1.5□□□□□ -2.17
ATG9YDL149W ARC15P40518 154 aaRIP-Chip data1.5□□□□□ -2.17 RIP-Chip
ATG9YDL149W CUP9P41817 306 aa1.5□□□□□ -2.17
ATG9YDL149W DIM1P41819 318 aaKnown RBP1.5□□□□□ -2.17
ATG9YDL149W YDR274CP87283 123 aa1.5□□□□□ -2.17
ATG9YDL149W RIM9Q04734 239 aa1.5□□□□□ -2.17
ATG9YDL149W SWC7Q06707 132 aa1.5□□□□□ -2.17
ATG9YDL149W ATX2Q12067 313 aa1.5□□□□□ -2.17
ATG9YDL149W TIM22Q12328 207 aa1.5□□□□□ -2.17
ATG9YDL149W RPL13AQ12690 199 aaPredicted RBP1.5□□□□□ -2.17
ATG9YDL149W IRC20Q06554 1556 aa1.5□□□□□ -2.17
ATG9YDL149W TIM9O74700 87 aa1.5□□□□□ -2.17
ATG9YDL149W UBC4P15731 148 aa1.5□□□□□ -2.17
ATG9YDL149W SRB6P32570 121 aa1.5□□□□□ -2.17
ATG9YDL149W PUB1P32588 453 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
ATG9YDL149W CLB6P32943 380 aa1.5□□□□□ -2.17
ATG9YDL149W PAM17P36147 197 aa1.5□□□□□ -2.17
ATG9YDL149W PTH1P38876 190 aaKnown RBP1.5□□□□□ -2.17
ATG9YDL149W TVP23P38962 199 aa1.5□□□□□ -2.17
ATG9YDL149W YPL067CQ02754 198 aa1.5□□□□□ -2.17
ATG9YDL149W GRX5Q02784 150 aa1.5□□□□□ -2.17
ATG9YDL149W SYM1Q06563 197 aa1.5□□□□□ -2.17
ATG9YDL149W SCP1Q08873 200 aa1.5□□□□□ -2.17
ATG9YDL149W AYT1Q12226 474 aa1.5□□□□□ -2.17
ATG9YDL149W YAL063C-AQ3E791 96 aa1.5□□□□□ -2.17
ATG9YDL149W POL1P13382 1468 aa1.5□□□□□ -2.17
ATG9YDL149W VPS15P22219 1454 aa1.5□□□□□ -2.17
ATG9YDL149W ATR1P13090 542 aa1.5□□□□□ -2.17
ATG9YDL149W MDH2P22133 377 aa1.5□□□□□ -2.17
ATG9YDL149W YCR043CP25361 127 aa1.5□□□□□ -2.17
ATG9YDL149W YFR035CP43608 114 aa1.5□□□□□ -2.17
ATG9YDL149W EAF6P47128 113 aa1.5□□□□□ -2.17
ATG9YDL149W LIP1Q03579 150 aa1.5□□□□□ -2.17
ATG9YDL149W API2Q04413 109 aa1.5□□□□□ -2.17
ATG9YDL149W YMR254CQ04838 102 aa1.5□□□□□ -2.17
ATG9YDL149W CRC1Q12289 327 aa1.5□□□□□ -2.17
ATG9YDL149W YGL194C-AQ2V2P6 80 aa1.5□□□□□ -2.17
ATG9YDL149W SIN3P22579 1536 aa1.49□□□□□ -2.17
ATG9YDL149W RAS2P01120 322 aaKnown RBP1.49□□□□□ -2.17
ATG9YDL149W NOP1P15646 327 aaKnown RBP1.49□□□□□ -2.17
ATG9YDL149W MRPL11P36521 249 aaPredicted RBP1.49□□□□□ -2.17
ATG9YDL149W YEL028WP39989 153 aa1.49□□□□□ -2.17
ATG9YDL149W YER188WP40103 239 aa1.49□□□□□ -2.17
ATG9YDL149W MPM1P40364 252 aa1.49□□□□□ -2.17
ATG9YDL149W PAM16P42949 149 aa1.49□□□□□ -2.17
ATG9YDL149W YNR064CP53750 290 aa1.49□□□□□ -2.17
ATG9YDL149W ATG10Q07879 167 aa1.49□□□□□ -2.17
ATG9YDL149W FKS3Q04952 1785 aa1.49□□□□□ -2.17
ATG9YDL149W YET1P35723 206 aa1.49□□□□□ -2.17
ATG9YDL149W YAR029WP39549 74 aa1.49□□□□□ -2.17
ATG9YDL149W IGD1P43598 195 aa1.49□□□□□ -2.17
ATG9YDL149W YMR252CQ04814 134 aa1.49□□□□□ -2.17
ATG9YDL149W YHR213W-AQ8TGT4 77 aa1.49□□□□□ -2.17
ATG9YDL149W UTP10P42945 1769 aaKnown RBP1.49□□□□□ -2.17
ATG9YDL149W ATP15P21306 62 aa1.48□□□□□ -2.17
ATG9YDL149W ASP1P38986 381 aaPredicted RBP1.48□□□□□ -2.17
ATG9YDL149W VTC1P40046 129 aaRIP-Chip data1.48□□□□□ -2.17 RIP-Chip
ATG9YDL149W ATG18P43601 500 aa1.48□□□□□ -2.17
ATG9YDL149W SCW4P53334 386 aaKnown RBP1.48□□□□□ -2.17
ATG9YDL149W MIX14Q04341 121 aa1.48□□□□□ -2.17
ATG9YDL149W ANT1Q06497 328 aa1.48□□□□□ -2.17
ATG9YDL149W RAF1Q06891 181 aa1.48□□□□□ -2.17
ATG9YDL149W FIT3Q08907 204 aa1.48□□□□□ -2.17
ATG9YDL149W DFM1Q12743 341 aaKnown RBP1.48□□□□□ -2.17
ATG9YDL149W YOS1Q3E834 85 aa1.48□□□□□ -2.17
ATG9YDL149W KSH1Q8TGJ3 72 aa1.48□□□□□ -2.17
ATG9YDL149W TAD3Q9URQ3 322 aa1.48□□□□□ -2.17
ATG9YDL149W SPO14P36126 1683 aa1.48□□□□□ -2.17
ATG9YDL149W ECM29P38737 1868 aa1.48□□□□□ -2.17
ATG9YDL149W RNQ1P25367 405 aa1.48□□□□□ -2.17
ATG9YDL149W SDH3P33421 198 aa1.48□□□□□ -2.17
ATG9YDL149W TMA19P35691 167 aaKnown RBP1.48□□□□□ -2.17
ATG9YDL149W YRA2P36036 203 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
ATG9YDL149W RSM19P53733 91 aaPredicted RBP1.48□□□□□ -2.17
ATG9YDL149W ATP19P81451 68 aa1.48□□□□□ -2.17
ATG9YDL149W SML1Q04964 104 aa1.48□□□□□ -2.17
ATG9YDL149W IRC25Q07951 179 aa1.48□□□□□ -2.17
ATG9YDL149W MED11Q99278 115 aa1.48□□□□□ -2.17
ATG9YDL149W MMS22Q06164 1454 aa1.48□□□□□ -2.17
ATG9YDL149W SRB8P25648 1427 aa1.48□□□□□ -2.17
ATG9YDL149W MSW1P04803 379 aa1.47□□□□□ -2.17
ATG9YDL149W EMP24P32803 203 aaKnown RBP1.47□□□□□ -2.17
ATG9YDL149W GPI18P38211 433 aa1.47□□□□□ -2.17
ATG9YDL149W UMP1P38293 148 aa1.47□□□□□ -2.17
ATG9YDL149W FYV4P38783 130 aaPredicted RBP1.47□□□□□ -2.17
ATG9YDL149W CCS1P40202 249 aaKnown RBP1.47□□□□□ -2.17
ATG9YDL149W FLX1P40464 311 aa1.47□□□□□ -2.17
ATG9YDL149W YIL059CP40520 121 aa1.47□□□□□ -2.17
ATG9YDL149W RPR2P40571 144 aa1.47□□□□□ -2.17
ATG9YDL149W PIR5P46999 287 aa1.47□□□□□ -2.17
ATG9YDL149W COX4P04037 155 aa1.47□□□□□ -2.17
ATG9YDL149W YCR050CP25630 102 aa1.47□□□□□ -2.17
ATG9YDL149W RPA12P32529 125 aaKnown RBP1.47□□□□□ -2.17
ATG9YDL149W SNF11P38956 169 aa1.47□□□□□ -2.17
ATG9YDL149W TVP15Q03860 143 aa1.47□□□□□ -2.17
ATG9YDL149W SHH3Q04487 196 aa1.47□□□□□ -2.17
ATG9YDL149W ULS1Q08562 1619 aa1.47□□□□□ -2.17
ATG9YDL149W YLR422WQ06409 1932 aa1.47□□□□□ -2.17
ATG9YDL149W POR1P04840 283 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms