RNA–Protein interactions for RNA: YDL105W

NSE4, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE4, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE4YDL105W RFU1Q08003 200 aa1.13□□□□□ -2.23
NSE4YDL105W SPT14P32363 452 aa1.12□□□□□ -2.23
NSE4YDL105W YAP3P38749 330 aa1.12□□□□□ -2.23
NSE4YDL105W IPI1P38803 334 aaPredicted RBP1.12□□□□□ -2.23
NSE4YDL105W YEL014CP39999 101 aa1.12□□□□□ -2.23
NSE4YDL105W YJL218WP40892 196 aaKnown RBP1.12□□□□□ -2.23
NSE4YDL105W YFL051CP43552 160 aa1.12□□□□□ -2.23
NSE4YDL105W RCF2P53721 224 aa1.12□□□□□ -2.23
NSE4YDL105W TAF2P23255 1407 aa1.12□□□□□ -2.23
NSE4YDL105W SLH1P53327 1967 aaKnown RBP1.12□□□□□ -2.23
NSE4YDL105W SRP21P32342 167 aa1.11□□□□□ -2.23
NSE4YDL105W YKR070WP36151 352 aaKnown RBP1.11□□□□□ -2.23
NSE4YDL105W ECM31P38122 312 aa1.11□□□□□ -2.23
NSE4YDL105W DCV1P43595 202 aa1.11□□□□□ -2.23
NSE4YDL105W APS3P47064 194 aa1.11□□□□□ -2.23
NSE4YDL105W EST3Q03096 181 aa1.11□□□□□ -2.23
NSE4YDL105W YOR1P53049 1477 aa1.11□□□□□ -2.23
NSE4YDL105W KIN28P06242 306 aa1.1□□□□□ -2.23
NSE4YDL105W HSP12P22943 109 aaKnown RBP1.1□□□□□ -2.23
NSE4YDL105W GLC8P41818 229 aa1.1□□□□□ -2.23
NSE4YDL105W LSM1P47017 172 aaKnown RBP1.1□□□□□ -2.23
NSE4YDL105W YDR366CP87287 132 aa1.1□□□□□ -2.23
NSE4YDL105W YDC1Q02896 317 aa1.1□□□□□ -2.23
NSE4YDL105W IRC19Q07843 230 aa1.1□□□□□ -2.23
NSE4YDL105W VAM10Q08474 114 aa1.1□□□□□ -2.23
NSE4YDL105W FCY1Q12178 158 aa1.1□□□□□ -2.23
NSE4YDL105W UBR1P19812 1950 aa1.1□□□□□ -2.23
NSE4YDL105W DDR48P18899 430 aaKnown RBP1.09□□□□□ -2.23
NSE4YDL105W HSP150P32478 413 aa1.09□□□□□ -2.23
NSE4YDL105W GPI2P46961 280 aa1.09□□□□□ -2.23
NSE4YDL105W CMC4Q3E7A9 73 aa1.09□□□□□ -2.23
NSE4YDL105W SCS22Q6Q595 175 aa1.09□□□□□ -2.23
NSE4YDL105W YER188C-AP0C0V2 99 aa1.08□□□□□ -2.24
NSE4YDL105W HYP2P23301 157 aaKnown RBP1.08□□□□□ -2.24
NSE4YDL105W YBR027CP38220 110 aa1.08□□□□□ -2.24
NSE4YDL105W YAR064WP39563 99 aa1.08□□□□□ -2.24
NSE4YDL105W RBL2P48606 106 aaKnown RBP1.08□□□□□ -2.24
NSE4YDL105W AIM36Q03798 255 aa1.08□□□□□ -2.24
NSE4YDL105W IPT1P38954 527 aa1.07□□□□□ -2.24
NSE4YDL105W VMA10P48836 114 aaKnown RBP1.07□□□□□ -2.24
NSE4YDL105W YMR320WQ04897 101 aa1.07□□□□□ -2.24
NSE4YDL105W YPR153WQ06537 140 aa1.07□□□□□ -2.24
NSE4YDL105W LCL2Q08045 131 aa1.07□□□□□ -2.24
NSE4YDL105W YIL102CP40488 101 aa1.06□□□□□ -2.24
NSE4YDL105W HHO1P53551 258 aa1.06□□□□□ -2.24
NSE4YDL105W COF1Q03048 143 aaKnown RBP1.06□□□□□ -2.24
NSE4YDL105W GPI11Q06636 219 aa1.06□□□□□ -2.24
NSE4YDL105W RPC19P28000 142 aaKnown RBP1.05□□□□□ -2.24
NSE4YDL105W SUI1P32911 108 aaKnown RBP1.05□□□□□ -2.24
NSE4YDL105W YGR201CP42936 225 aa1.05□□□□□ -2.24
NSE4YDL105W SPG1P50088 95 aa1.05□□□□□ -2.24
NSE4YDL105W YGR039WP53225 103 aa1.05□□□□□ -2.24
NSE4YDL105W CCW12Q12127 133 aa1.05□□□□□ -2.24
NSE4YDL105W NHP6AP11632 93 aaKnown RBP1.04□□□□□ -2.24
NSE4YDL105W DIE2P50076 525 aa1.04□□□□□ -2.24
NSE4YDL105W CDC39P25655 2108 aaKnown RBP1.03□□□□□ -2.24
NSE4YDL105W UGX2P32772 223 aa1.03□□□□□ -2.24
NSE4YDL105W LSM8P47093 109 aaKnown RBP1.03□□□□□ -2.24
NSE4YDL105W YCL001W-AP87012 153 aa1.03□□□□□ -2.24
NSE4YDL105W SED1Q01589 338 aa1.03□□□□□ -2.24
NSE4YDL105W RAF1Q06891 181 aa1.03□□□□□ -2.24
NSE4YDL105W HUT1Q12520 339 aa1.03□□□□□ -2.24
NSE4YDL105W RPS1BP23248 255 aaKnown RBP1.02□□□□□ -2.25
NSE4YDL105W YCR001WP25347 104 aa1.02□□□□□ -2.25
NSE4YDL105W SRL3P36167 246 aa1.02□□□□□ -2.25
NSE4YDL105W ATG8P38182 117 aaRIP-Chip data1.02□□□□□ -2.25not detected
NSE4YDL105W TMA23Q03525 211 aa1.02□□□□□ -2.25
NSE4YDL105W SPC3Q12133 184 aa1.02□□□□□ -2.25
NSE4YDL105W DDP1Q99321 188 aaKnown RBP1.02□□□□□ -2.25
NSE4YDL105W FMP49A0A023PZB3 126 aa1.01□□□□□ -2.25
NSE4YDL105W COX5BP00425 151 aa1.01□□□□□ -2.25
NSE4YDL105W FYV5P25585 152 aa1.01□□□□□ -2.25
NSE4YDL105W YNL122CP53921 115 aaPredicted RBP1.01□□□□□ -2.25
NSE4YDL105W CSN9Q03981 162 aa1.01□□□□□ -2.25
NSE4YDL105W SOM1Q05676 74 aa1.01□□□□□ -2.25
NSE4YDL105W RPL33AP05744 107 aaKnown RBP1□□□□□ -2.25
NSE4YDL105W PHB1P40961 287 aa1□□□□□ -2.25
NSE4YDL105W EMC4P53073 190 aa1□□□□□ -2.25
NSE4YDL105W NAT5Q08689 176 aa1□□□□□ -2.25
NSE4YDL105W YOR385WQ08909 290 aa1□□□□□ -2.25
NSE4YDL105W MHF1Q3E835 90 aa1□□□□□ -2.25
NSE4YDL105W RIB3Q99258 208 aa1□□□□□ -2.25
NSE4YDL105W MRPL44P19956 98 aa0.99□□□□□ -2.25
NSE4YDL105W YHR140WP38842 239 aa0.99□□□□□ -2.25
NSE4YDL105W CYC2P38909 366 aa0.99□□□□□ -2.25
NSE4YDL105W YNL019CP53975 284 aa0.99□□□□□ -2.25
NSE4YDL105W IRC21Q04772 201 aa0.99□□□□□ -2.25
NSE4YDL105W YOR072WQ08486 104 aa0.99□□□□□ -2.25
NSE4YDL105W YOL013W-AP0C272 63 aaPredicted RBP0.98□□□□□ -2.25
NSE4YDL105W SEN15Q04675 128 aa0.98□□□□□ -2.25
NSE4YDL105W HAP2P06774 265 aa0.97□□□□□ -2.25
NSE4YDL105W YGL014C-AP0C5N1 53 aa0.97□□□□□ -2.25
NSE4YDL105W ANB1P19211 157 aa0.97□□□□□ -2.25
NSE4YDL105W ACP1P32463 125 aa0.97□□□□□ -2.25
NSE4YDL105W RPS1AP33442 255 aaKnown RBP0.97□□□□□ -2.25
NSE4YDL105W GIM4P40005 111 aaKnown RBP0.97□□□□□ -2.25
NSE4YDL105W YGL204CP53089 101 aa0.97□□□□□ -2.25
NSE4YDL105W YGR042WP53227 271 aa0.97□□□□□ -2.25
NSE4YDL105W HSL1P34244 1518 aa0.97□□□□□ -2.25
NSE4YDL105W RPS22AP0C0W1 130 aaKnown RBP0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms