RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeastyeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDS1YBR029C MED11Q99278 115 aa3.41□□□□□ -1.86
CDS1YBR029C MSB2P32334 1306 aa3.41□□□□□ -1.86
CDS1YBR029C FZF1P32805 299 aa3.4□□□□□ -1.86
CDS1YBR029C ARC19P33204 171 aaKnown RBP3.4□□□□□ -1.86
CDS1YBR029C SAY1P53324 424 aa3.4□□□□□ -1.86
CDS1YBR029C IGO1P53897 168 aa3.4□□□□□ -1.86
CDS1YBR029C PIR1Q03178 341 aa3.4□□□□□ -1.86
CDS1YBR029C GAL83Q04739 417 aa3.4□□□□□ -1.86
CDS1YBR029C MHF2Q3E829 80 aa3.4□□□□□ -1.86
CDS1YBR029C RIB3Q99258 208 aa3.4□□□□□ -1.86
CDS1YBR029C ATG40Q99325 256 aa3.4□□□□□ -1.86
CDS1YBR029C POR1P04840 283 aaKnown RBP3.39□□□□□ -1.87
CDS1YBR029C MDH2P22133 377 aa3.39□□□□□ -1.87
CDS1YBR029C BUD23P25627 275 aaPredicted RBP3.39□□□□□ -1.87
CDS1YBR029C YKL102CP34249 101 aa3.39□□□□□ -1.87
CDS1YBR029C IPT1P38954 527 aa3.39□□□□□ -1.87
CDS1YBR029C MPM1P40364 252 aa3.39□□□□□ -1.87
CDS1YBR029C ORM1P53224 222 aa3.39□□□□□ -1.87
CDS1YBR029C RRP17Q04031 235 aaPredicted RBP3.39□□□□□ -1.87
CDS1YBR029C YAR023CD6VPM8 179 aa3.38□□□□□ -1.87
CDS1YBR029C ARO7P32178 256 aa3.38□□□□□ -1.87
CDS1YBR029C FMP23P38231 175 aa3.38□□□□□ -1.87
CDS1YBR029C GRX5Q02784 150 aa3.38□□□□□ -1.87
CDS1YBR029C YMR295CQ03559 197 aa3.38□□□□□ -1.87
CDS1YBR029C YPR114WQ06107 315 aa3.38□□□□□ -1.87
CDS1YBR029C PST2Q12335 198 aaKnown RBP3.38□□□□□ -1.87
CDS1YBR029C NUF2P33895 451 aa3.38□□□□□ -1.87
CDS1YBR029C YER121WP40076 114 aa3.38□□□□□ -1.87
CDS1YBR029C BUD25P85052 153 aa3.38□□□□□ -1.87
CDS1YBR029C MET31Q03081 177 aa3.38□□□□□ -1.87
CDS1YBR029C MHF1Q3E835 90 aa3.38□□□□□ -1.87
CDS1YBR029C QCR2P07257 368 aa3.37□□□□□ -1.87
CDS1YBR029C NSG1P38837 291 aa3.37□□□□□ -1.87
CDS1YBR029C GPI14P47088 403 aaKnown RBP3.37□□□□□ -1.87
CDS1YBR029C GTT2Q12390 233 aa3.37□□□□□ -1.87
CDS1YBR029C YEL073CP39974 107 aa3.36□□□□□ -1.87
CDS1YBR029C SOK1P40317 901 aa3.36□□□□□ -1.87
CDS1YBR029C EMC4P53073 190 aa3.36□□□□□ -1.87
CDS1YBR029C UBR1P19812 1950 aa3.35□□□□□ -1.87
CDS1YBR029C YLR236CA0A023PZG4 107 aa3.35□□□□□ -1.87
CDS1YBR029C LHP1P33399 275 aaKnown RBP3.35□□□□□ -1.87
CDS1YBR029C MPC3P53311 146 aa3.35□□□□□ -1.87
CDS1YBR029C VPS71Q03433 280 aa3.35□□□□□ -1.87
CDS1YBR029C CUE4Q04201 117 aaPredicted RBP3.35□□□□□ -1.87
CDS1YBR029C STF2P16965 84 aa3.34□□□□□ -1.88
CDS1YBR029C PEX34P25584 144 aa3.34□□□□□ -1.88
CDS1YBR029C RFC2P40348 353 aa3.34□□□□□ -1.88
CDS1YBR029C YFL019CP43576 117 aa3.34□□□□□ -1.88
CDS1YBR029C MAK3Q03503 176 aa3.34□□□□□ -1.88
CDS1YBR029C SHH3Q04487 196 aa3.34□□□□□ -1.88
CDS1YBR029C YLR412C-AQ3E742 68 aa3.34□□□□□ -1.88
CDS1YBR029C RPS1BP23248 255 aaKnown RBP3.33□□□□□ -1.88
CDS1YBR029C SPO13P23624 291 aa3.33□□□□□ -1.88
CDS1YBR029C SPT14P32363 452 aa3.33□□□□□ -1.88
CDS1YBR029C AME1P38313 324 aa3.33□□□□□ -1.88
CDS1YBR029C VMA22P38784 181 aa3.33□□□□□ -1.88
CDS1YBR029C NAT3Q06504 195 aa3.33□□□□□ -1.88
CDS1YBR029C UIP4Q08926 304 aa3.33□□□□□ -1.88
CDS1YBR029C YJL218WP40892 196 aaKnown RBP3.32□□□□□ -1.88
CDS1YBR029C CUP9P41817 306 aa3.32□□□□□ -1.88
CDS1YBR029C YGR201CP42936 225 aa3.32□□□□□ -1.88
CDS1YBR029C ERJ5P43613 295 aaPredicted RBP3.32□□□□□ -1.88
CDS1YBR029C MPC1P53157 130 aaKnown RBP3.32□□□□□ -1.88
CDS1YBR029C RNH202Q05635 350 aa3.32□□□□□ -1.88
CDS1YBR029C COA4Q05809 96 aa3.32□□□□□ -1.88
CDS1YBR029C RAD28Q12021 506 aa3.32□□□□□ -1.88
CDS1YBR029C IDP1P21954 428 aaKnown RBP3.31□□□□□ -1.88
CDS1YBR029C IPI1P38803 334 aaPredicted RBP3.31□□□□□ -1.88
CDS1YBR029C NQM1P53228 333 aaPredicted RBP3.31□□□□□ -1.88
CDS1YBR029C DGK1Q12382 290 aa3.31□□□□□ -1.88
CDS1YBR029C GIM4P40005 111 aaKnown RBP3.3□□□□□ -1.88
CDS1YBR029C APQ12P40532 138 aa3.3□□□□□ -1.88
CDS1YBR029C YAE1P47118 141 aaPredicted RBP3.3□□□□□ -1.88
CDS1YBR029C PAC10P48363 199 aa3.3□□□□□ -1.88
CDS1YBR029C DIE2P50076 525 aa3.3□□□□□ -1.88
CDS1YBR029C KNH1P50112 268 aa3.3□□□□□ -1.88
CDS1YBR029C ANT1Q06497 328 aa3.3□□□□□ -1.88
CDS1YBR029C TRA1P38811 3744 aa3.3□□□□□ -1.88
CDS1YBR029C MEC1P38111 2368 aa3.3□□□□□ -1.88
CDS1YBR029C FLO9P39712 1322 aa3.29□□□□□ -1.88
CDS1YBR029C FPR1P20081 114 aaKnown RBP3.29□□□□□ -1.88
CDS1YBR029C POP3P53833 195 aaPredicted RBP3.29□□□□□ -1.88
CDS1YBR029C TIR1P10863 254 aa3.28□□□□□ -1.88
CDS1YBR029C TMA19P35691 167 aaKnown RBP3.28□□□□□ -1.88
CDS1YBR029C YFR054CP43622 192 aa3.28□□□□□ -1.88
CDS1YBR029C ELP6Q04868 273 aa3.28□□□□□ -1.88
CDS1YBR029C ATG10Q07879 167 aa3.28□□□□□ -1.88
CDS1YBR029C IRC23Q08416 157 aa3.28□□□□□ -1.88
CDS1YBR029C RPS28BP0C0X0 67 aaKnown RBP3.27□□□□□ -1.89
CDS1YBR029C SBH1P52870 82 aa3.27□□□□□ -1.89
CDS1YBR029C YGL235WP53071 178 aa3.27□□□□□ -1.89
CDS1YBR029C MPA43P53583 542 aaPredicted RBP3.27□□□□□ -1.89
CDS1YBR029C YDL180WQ12301 547 aa3.27□□□□□ -1.89
CDS1YBR029C RPS28AQ3E7X9 67 aaPredicted RBP3.27□□□□□ -1.89
CDS1YBR029C YBR056W-AI2HB52 66 aa3.26□□□□□ -1.89
CDS1YBR029C SEC11P15367 167 aa3.26□□□□□ -1.89
CDS1YBR029C SPC25P40014 221 aa3.26□□□□□ -1.89
CDS1YBR029C NSA2P40078 261 aaKnown RBP3.26□□□□□ -1.89
CDS1YBR029C XPT1P47165 209 aa3.26□□□□□ -1.89
CDS1YBR029C DIG2Q03373 323 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms