RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 YLR157W-EP0CF00 54 aa-0.25□□□□□ -2.45
snR54snR54 PTC1P35182 281 aa-0.25□□□□□ -2.45
snR54snR54 YBR027CP38220 110 aa-0.25□□□□□ -2.45
snR54snR54 APS3P47064 194 aa-0.25□□□□□ -2.45
snR54snR54 SOL1P50278 321 aa-0.25□□□□□ -2.45
snR54snR54 YML079WQ03629 201 aa-0.25□□□□□ -2.45
snR54snR54 SHH4Q06236 168 aa-0.25□□□□□ -2.45
snR54snR54 YOR214CQ12282 236 aa-0.25□□□□□ -2.45
snR54snR54 YDL085C-AQ3E7B7 68 aaKnown RBP-0.25□□□□□ -2.45
snR54snR54 AHC2P25649 128 aa-0.26□□□□□ -2.45
snR54snR54 YKL102CP34249 101 aa-0.26□□□□□ -2.45
snR54snR54 RFC2P40348 353 aa-0.26□□□□□ -2.45
snR54snR54 CCC1P47818 322 aa-0.26□□□□□ -2.45
snR54snR54 PAC10P48363 199 aa-0.26□□□□□ -2.45
snR54snR54 RAD9P14737 1309 aa-0.27□□□□□ -2.45
snR54snR54 RPS25BP0C0T4 108 aaKnown RBP-0.27□□□□□ -2.45
snR54snR54 RPS22AP0C0W1 130 aaKnown RBP-0.27□□□□□ -2.45
snR54snR54 RPB4P20433 221 aaPredicted RBP-0.27□□□□□ -2.45
snR54snR54 UBC6P33296 250 aaPredicted RBP-0.27□□□□□ -2.45
snR54snR54 YEL073CP39974 107 aa-0.27□□□□□ -2.45
snR54snR54 GEP7P53171 287 aa-0.27□□□□□ -2.45
snR54snR54 GRX8Q05926 109 aa-0.27□□□□□ -2.45
snR54snR54 YOR072WQ08486 104 aa-0.27□□□□□ -2.45
snR54snR54 RPS25AQ3E792 108 aaPredicted RBP-0.27□□□□□ -2.45
snR54snR54 RPS22BQ3E7Y3 130 aaKnown RBP-0.27□□□□□ -2.45
snR54snR54 HAP2P06774 265 aa-0.28□□□□□ -2.45
snR54snR54 GPI17Q04080 534 aa-0.28□□□□□ -2.45
snR54snR54 CMC4Q3E7A9 73 aa-0.28□□□□□ -2.45
snR54snR54 RAD6P06104 172 aa-0.29□□□□□ -2.46
snR54snR54 FMP32P43557 207 aa-0.29□□□□□ -2.46
snR54snR54 YDL241WQ07738 123 aa-0.29□□□□□ -2.46
snR54snR54 SPT14P32363 452 aa-0.3□□□□□ -2.46
snR54snR54 CAF4P36130 643 aa-0.3□□□□□ -2.46
snR54snR54 YKR041WP36134 250 aa-0.3□□□□□ -2.46
snR54snR54 YEL028WP39989 153 aa-0.3□□□□□ -2.46
snR54snR54 GLR1P41921 483 aaKnown RBP-0.3□□□□□ -2.46
snR54snR54 TTI2P47168 421 aa-0.3□□□□□ -2.46
snR54snR54 NQM1P53228 333 aaPredicted RBP-0.3□□□□□ -2.46
snR54snR54 TRM3Q07527 1436 aa-0.3□□□□□ -2.46
snR54snR54 HSL1P34244 1518 aa-0.31□□□□□ -2.46
snR54snR54 SPS2P08459 502 aa-0.31□□□□□ -2.46
snR54snR54 CSH1P38287 376 aa-0.31□□□□□ -2.46
snR54snR54 YKT6P36015 200 aaKnown RBP-0.32□□□□□ -2.46
snR54snR54 YEL014CP39999 101 aa-0.32□□□□□ -2.46
snR54snR54 GLC8P41818 229 aa-0.32□□□□□ -2.46
snR54snR54 TIM13P53299 105 aa-0.32□□□□□ -2.46
snR54snR54 TIM11P81449 96 aaPredicted RBP-0.32□□□□□ -2.46
snR54snR54 SEN15Q04675 128 aa-0.32□□□□□ -2.46
snR54snR54 SYM1Q06563 197 aa-0.32□□□□□ -2.46
snR54snR54 INO4P13902 151 aa-0.33□□□□□ -2.46
snR54snR54 HSP150P32478 413 aa-0.33□□□□□ -2.46
snR54snR54 NVJ1P38881 321 aa-0.33□□□□□ -2.46
snR54snR54 HOP2P53187 214 aa-0.33□□□□□ -2.46
snR54snR54 ATG8P38182 117 aaRIP-Chip data-0.34□□□□□ -2.46not detected
snR54snR54 LIP1Q03579 150 aa-0.34□□□□□ -2.46
snR54snR54 SNO1Q03144 224 aa-0.35□□□□□ -2.47
snR54snR54 SNF2P22082 1703 aa-0.35□□□□□ -2.47
snR54snR54 APA2P22108 325 aa-0.36□□□□□ -2.47
snR54snR54 HPT1Q04178 221 aaKnown RBP-0.36□□□□□ -2.47
snR54snR54 UIP4Q08926 304 aa-0.36□□□□□ -2.47
snR54snR54 YHR140WP38842 239 aa-0.37□□□□□ -2.47
snR54snR54 GSC2P40989 1895 aa-0.37□□□□□ -2.47
snR54snR54 BNI1P41832 1953 aa-0.37□□□□□ -2.47
snR54snR54 JIP3O13555 125 aa-0.38□□□□□ -2.47
snR54snR54 ECM31P38122 312 aa-0.38□□□□□ -2.47
snR54snR54 SHG1P38337 142 aa-0.38□□□□□ -2.47
snR54snR54 YOR034C-AQ3E735 80 aa-0.38□□□□□ -2.47
snR54snR54 HYP2P23301 157 aaKnown RBP-0.39□□□□□ -2.47
snR54snR54 IPT1P38954 527 aa-0.39□□□□□ -2.47
snR54snR54 YPR114WQ06107 315 aa-0.39□□□□□ -2.47
snR54snR54 ATG10Q07879 167 aa-0.39□□□□□ -2.47
snR54snR54 RIB3Q99258 208 aa-0.39□□□□□ -2.47
snR54snR54 ADE6P38972 1358 aaKnown RBP-0.4□□□□□ -2.47
snR54snR54 NUF2P33895 451 aa-0.4□□□□□ -2.47
snR54snR54 YPT31P38555 223 aaKnown RBP-0.41□□□□□ -2.48
snR54snR54 CGR1P53188 120 aa-0.41□□□□□ -2.48
snR54snR54 RPL33AP05744 107 aaKnown RBP-0.42□□□□□ -2.48
snR54snR54 HTD2P38790 280 aaKnown RBP-0.42□□□□□ -2.48
snR54snR54 XPT1P47165 209 aa-0.42□□□□□ -2.48
snR54snR54 PEX11Q12462 236 aa-0.42□□□□□ -2.48
snR54snR54 SPA2P23201 1466 aaKnown RBP-0.42□□□□□ -2.48
snR54snR54 SLM6P38343 150 aa-0.43□□□□□ -2.48
snR54snR54 YNR064CP53750 290 aa-0.43□□□□□ -2.48
snR54snR54 THI74Q04083 370 aa-0.44□□□□□ -2.48
snR54snR54 UBR1P19812 1950 aa-0.45□□□□□ -2.48
snR54snR54 YJL009WP47078 108 aa-0.45□□□□□ -2.48
snR54snR54 NMA1Q06178 401 aaKnown RBP-0.45□□□□□ -2.48
snR54snR54 GRE1Q08969 168 aa-0.45□□□□□ -2.48
snR54snR54 RPS29BP41058 56 aaKnown RBP-0.46□□□□□ -2.48
snR54snR54 MVB12P42939 101 aa-0.46□□□□□ -2.48
snR54snR54 DIE2P50076 525 aa-0.46□□□□□ -2.48
snR54snR54 JAC1P53193 184 aa-0.46□□□□□ -2.48
snR54snR54 SRP102P36057 244 aaPredicted RBP-0.47□□□□□ -2.48
snR54snR54 FMN1Q03778 218 aa-0.47□□□□□ -2.48
snR54snR54 YDR102CQ03864 110 aa-0.47□□□□□ -2.48
snR54snR54 YET3Q07451 203 aa-0.47□□□□□ -2.48
snR54snR54 HUG1Q6Q5K6 68 aa-0.48□□□□□ -2.49
snR54snR54 MRS4P23500 304 aa-0.49□□□□□ -2.49
snR54snR54 RCF2P53721 224 aa-0.49□□□□□ -2.49
snR54snR54 YMR321CQ04898 105 aa-0.49□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 164.8 ms