RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C ALB1P47019 175 aaPredicted RBP1.85□□□□□ -2.11
WHI3YNL197C QCR8P08525 94 aa1.84□□□□□ -2.11
WHI3YNL197C PEX34P25584 144 aa1.84□□□□□ -2.11
WHI3YNL197C RPB7P34087 171 aa1.84□□□□□ -2.11
WHI3YNL197C YRA2P36036 203 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
WHI3YNL197C RIO2P40160 425 aaKnown RBP1.84□□□□□ -2.11
WHI3YNL197C MOG1P47123 218 aa1.84□□□□□ -2.11
WHI3YNL197C YDR476CQ03362 224 aa1.84□□□□□ -2.11
WHI3YNL197C PET54P10834 293 aa1.83□□□□□ -2.12
WHI3YNL197C PAC10P48363 199 aa1.83□□□□□ -2.12
WHI3YNL197C RRP17Q04031 235 aaPredicted RBP1.83□□□□□ -2.12
WHI3YNL197C YMR252CQ04814 134 aa1.83□□□□□ -2.12
WHI3YNL197C TRM3Q07527 1436 aa1.83□□□□□ -2.12
WHI3YNL197C PTC1P35182 281 aa1.83□□□□□ -2.12
WHI3YNL197C YEL008WP40001 126 aa1.83□□□□□ -2.12
WHI3YNL197C UPS3Q04006 179 aa1.83□□□□□ -2.12
WHI3YNL197C MAK31P23059 88 aa1.82□□□□□ -2.12
WHI3YNL197C SRP102P36057 244 aaPredicted RBP1.82□□□□□ -2.12
WHI3YNL197C CCS1P40202 249 aaKnown RBP1.82□□□□□ -2.12
WHI3YNL197C CCC1P47818 322 aa1.82□□□□□ -2.12
WHI3YNL197C IPI1P38803 334 aaPredicted RBP1.81□□□□□ -2.12
WHI3YNL197C ELP6Q04868 273 aa1.81□□□□□ -2.12
WHI3YNL197C YPR114WQ06107 315 aa1.81□□□□□ -2.12
WHI3YNL197C YNL146C-AQ3E7Z1 64 aa1.81□□□□□ -2.12
WHI3YNL197C STF2P16965 84 aa1.81□□□□□ -2.12
WHI3YNL197C FPR1P20081 114 aaKnown RBP1.81□□□□□ -2.12
WHI3YNL197C YER181CP40097 107 aa1.81□□□□□ -2.12
WHI3YNL197C HYR1P40581 163 aaKnown RBP1.81□□□□□ -2.12
WHI3YNL197C CWC27Q02770 301 aa1.81□□□□□ -2.12
WHI3YNL197C LIP1Q03579 150 aa1.81□□□□□ -2.12
WHI3YNL197C PBI2P0CT04 75 aaKnown RBP1.8□□□□□ -2.12
WHI3YNL197C SEN2P16658 377 aa1.8□□□□□ -2.12
WHI3YNL197C MRS4P23500 304 aa1.8□□□□□ -2.12
WHI3YNL197C YPT31P38555 223 aaKnown RBP1.8□□□□□ -2.12
WHI3YNL197C HTD2P38790 280 aaKnown RBP1.8□□□□□ -2.12
WHI3YNL197C YJL218WP40892 196 aaKnown RBP1.8□□□□□ -2.12
WHI3YNL197C LSM1P47017 172 aaKnown RBP1.8□□□□□ -2.12
WHI3YNL197C ATG10Q07879 167 aa1.8□□□□□ -2.12
WHI3YNL197C INO4P13902 151 aa1.79□□□□□ -2.12
WHI3YNL197C HHT1P61830 136 aa1.79□□□□□ -2.12
WHI3YNL197C RCE1Q03530 315 aa1.79□□□□□ -2.12
WHI3YNL197C PKR1Q03880 122 aaKnown RBP1.79□□□□□ -2.12
WHI3YNL197C YDL241WQ07738 123 aa1.79□□□□□ -2.12
WHI3YNL197C YHL042WP38729 150 aa1.79□□□□□ -2.12
WHI3YNL197C YEL067CP39978 195 aa1.79□□□□□ -2.12
WHI3YNL197C YNR064CP53750 290 aa1.79□□□□□ -2.12
WHI3YNL197C YMR320WQ04897 101 aa1.79□□□□□ -2.12
WHI3YNL197C ACC1Q00955 2233 aaKnown RBP1.78□□□□□ -2.12
WHI3YNL197C SPT14P32363 452 aa1.78□□□□□ -2.12
WHI3YNL197C YBL010CP32788 280 aa1.78□□□□□ -2.12
WHI3YNL197C ETR1P38071 380 aa1.78□□□□□ -2.12
WHI3YNL197C UBC7Q02159 165 aa1.78□□□□□ -2.12
WHI3YNL197C YFL065CP43539 102 aa1.78□□□□□ -2.13
WHI3YNL197C YGL193CP53097 103 aa1.78□□□□□ -2.13
WHI3YNL197C MZM1Q03429 123 aaPredicted RBP1.78□□□□□ -2.13
WHI3YNL197C UBR2Q07963 1872 aa1.77□□□□□ -2.13
WHI3YNL197C YOR1P53049 1477 aa1.77□□□□□ -2.13
WHI3YNL197C AQY2P0CD90 149 aa1.77□□□□□ -2.13
WHI3YNL197C PHO13P19881 312 aa1.77□□□□□ -2.13
WHI3YNL197C GRX5Q02784 150 aa1.77□□□□□ -2.13
WHI3YNL197C YMR030W-AQ3E760 96 aa1.77□□□□□ -2.13
WHI3YNL197C ACP1P32463 125 aa1.76□□□□□ -2.13
WHI3YNL197C MRPL24P36525 258 aaPredicted RBP1.76□□□□□ -2.13
WHI3YNL197C YGR269WP40326 108 aa1.76□□□□□ -2.13
WHI3YNL197C YJR015WP47090 510 aa1.76□□□□□ -2.13
WHI3YNL197C YPD1Q07688 167 aa1.76□□□□□ -2.13
WHI3YNL197C YML079WQ03629 201 aa1.76□□□□□ -2.13
WHI3YNL197C TAR1Q8TGM6 124 aa1.76□□□□□ -2.13
WHI3YNL197C SPS2P08459 502 aa1.75□□□□□ -2.13
WHI3YNL197C DDR48P18899 430 aaKnown RBP1.75□□□□□ -2.13
WHI3YNL197C MOB1P40484 314 aa1.75□□□□□ -2.13
WHI3YNL197C RAV2Q03956 351 aa1.75□□□□□ -2.13
WHI3YNL197C YDR391CQ04170 232 aa1.74□□□□□ -2.13
WHI3YNL197C AVO2Q04749 426 aa1.74□□□□□ -2.13
WHI3YNL197C COA3Q3E7B2 85 aa1.74□□□□□ -2.13
WHI3YNL197C YCL042WP25572 119 aa1.74□□□□□ -2.13
WHI3YNL197C HRD1Q08109 551 aa1.73□□□□□ -2.13
WHI3YNL197C UIP4Q08926 304 aa1.73□□□□□ -2.13
WHI3YNL197C SRP21P32342 167 aa1.72□□□□□ -2.13
WHI3YNL197C SOK1P40317 901 aa1.72□□□□□ -2.13
WHI3YNL197C RBL2P48606 106 aaKnown RBP1.72□□□□□ -2.13
WHI3YNL197C RFU1Q08003 200 aa1.72□□□□□ -2.13
WHI3YNL197C YGR201CP42936 225 aa1.71□□□□□ -2.14
WHI3YNL197C MET31Q03081 177 aa1.71□□□□□ -2.14
WHI3YNL197C EST3Q03096 181 aa1.71□□□□□ -2.14
WHI3YNL197C YDL157CQ12082 118 aa1.71□□□□□ -2.14
WHI3YNL197C CMC4Q3E7A9 73 aa1.71□□□□□ -2.14
WHI3YNL197C YBR242WP38331 238 aa1.7□□□□□ -2.14
WHI3YNL197C RIB3Q99258 208 aa1.7□□□□□ -2.14
WHI3YNL197C SPA2P23201 1466 aaKnown RBP1.7□□□□□ -2.14
WHI3YNL197C YAP3P38749 330 aa1.7□□□□□ -2.14
WHI3YNL197C GLC8P41818 229 aa1.7□□□□□ -2.14
WHI3YNL197C GEP7P53171 287 aa1.7□□□□□ -2.14
WHI3YNL197C SCS22Q6Q595 175 aa1.7□□□□□ -2.14
WHI3YNL197C UBR1P19812 1950 aa1.7□□□□□ -2.14
WHI3YNL197C RPS25BP0C0T4 108 aaKnown RBP1.69□□□□□ -2.14
WHI3YNL197C HSP12P22943 109 aaKnown RBP1.69□□□□□ -2.14
WHI3YNL197C AHT1P29589 182 aa1.69□□□□□ -2.14
WHI3YNL197C RPS25AQ3E792 108 aaPredicted RBP1.69□□□□□ -2.14
WHI3YNL197C YHR212W-AP0CX91 67 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 191.8 ms