RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W RPL25P04456 142 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W YGL041W-AP0C5N3 154 aa1.5□□□□□ -2.17
HSH155YMR288W SNF4P12904 322 aa1.5□□□□□ -2.17
HSH155YMR288W YCR025CP25352 136 aa1.5□□□□□ -2.17
HSH155YMR288W YRA2P36036 203 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
HSH155YMR288W MRPL39P36533 70 aa1.5□□□□□ -2.17
HSH155YMR288W LSM12P38828 187 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W YPL073CP40323 161 aa1.5□□□□□ -2.17
HSH155YMR288W YNL320WP42840 284 aa1.5□□□□□ -2.17
HSH155YMR288W YDR278CQ05612 105 aa1.5□□□□□ -2.17
HSH155YMR288W YLR179CQ06252 201 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W VAR1P02381 398 aa1.5□□□□□ -2.17
HSH155YMR288W RPL23AP0CX41 137 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W RPL23BP0CX42 137 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W MSI1P13712 422 aa1.5□□□□□ -2.17
HSH155YMR288W PHO85P17157 305 aa1.5□□□□□ -2.17
HSH155YMR288W MIR1P23641 311 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W RPL16AP26784 199 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W PTC1P35182 281 aa1.5□□□□□ -2.17
HSH155YMR288W DLS1P40366 167 aa1.5□□□□□ -2.17
HSH155YMR288W ERV29P53337 310 aa1.5□□□□□ -2.17
HSH155YMR288W NHP10Q03435 203 aa1.5□□□□□ -2.17
HSH155YMR288W YHC1Q05900 231 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W ATG39Q06159 398 aa1.5□□□□□ -2.17
HSH155YMR288W YOL029CQ08187 201 aa1.5□□□□□ -2.17
HSH155YMR288W YOR292CQ08743 309 aa1.5□□□□□ -2.17
HSH155YMR288W HEM4P06174 275 aa1.5□□□□□ -2.17
HSH155YMR288W SPS2P08459 502 aa1.5□□□□□ -2.17
HSH155YMR288W PBI2P0CT04 75 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W RPL30P14120 105 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W RPB9P27999 122 aa1.5□□□□□ -2.17
HSH155YMR288W PTM1P32857 523 aa1.5□□□□□ -2.17
HSH155YMR288W RPL14AP36105 138 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W YPT31P38555 223 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W RPL14BP38754 138 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W IRC22P40006 225 aa1.5□□□□□ -2.17
HSH155YMR288W YER188WP40103 239 aa1.5□□□□□ -2.17
HSH155YMR288W YNL200CP40165 246 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W AYR1P40471 297 aa1.5□□□□□ -2.17
HSH155YMR288W YFR054CP43622 192 aa1.5□□□□□ -2.17
HSH155YMR288W SKI6P46948 246 aaPredicted RBP1.5□□□□□ -2.17
HSH155YMR288W PGU1P47180 361 aa1.5□□□□□ -2.17
HSH155YMR288W FMP48P53233 369 aa1.5□□□□□ -2.17
HSH155YMR288W YGR219WP53307 113 aa1.5□□□□□ -2.17
HSH155YMR288W FMP41P53889 259 aaKnown RBP1.5□□□□□ -2.17
HSH155YMR288W AAH1P53909 347 aa1.5□□□□□ -2.17
HSH155YMR288W VPS71Q03433 280 aa1.5□□□□□ -2.17
HSH155YMR288W THI74Q04083 370 aa1.5□□□□□ -2.17
HSH155YMR288W YLR177WQ06251 628 aa1.5□□□□□ -2.17
HSH155YMR288W YPR174CQ06616 221 aaPredicted RBP1.5□□□□□ -2.17
HSH155YMR288W TFC7Q12415 435 aa1.5□□□□□ -2.17
HSH155YMR288W YGL194C-AQ2V2P6 80 aa1.5□□□□□ -2.17
HSH155YMR288W ATG22P25568 528 aa1.49□□□□□ -2.17
HSH155YMR288W YET1P35723 206 aa1.49□□□□□ -2.17
HSH155YMR288W YKR070WP36151 352 aaKnown RBP1.49□□□□□ -2.17
HSH155YMR288W MIX23P38162 196 aa1.49□□□□□ -2.17
HSH155YMR288W RPF1P38805 295 aaKnown RBP1.49□□□□□ -2.17
HSH155YMR288W PRM5P40476 318 aa1.49□□□□□ -2.17
HSH155YMR288W TTI2P47168 421 aa1.49□□□□□ -2.17
HSH155YMR288W DIE2P50076 525 aa1.49□□□□□ -2.17
HSH155YMR288W AIF1P52923 378 aa1.49□□□□□ -2.17
HSH155YMR288W YGL088WP53151 121 aa1.49□□□□□ -2.17
HSH155YMR288W YDR366CP87287 132 aa1.49□□□□□ -2.17
HSH155YMR288W MIX14Q04341 121 aa1.49□□□□□ -2.17
HSH155YMR288W YLR042CQ07990 161 aa1.49□□□□□ -2.17
HSH155YMR288W YLR118CQ12354 227 aa1.49□□□□□ -2.17
HSH155YMR288W YHR214C-EQ8TGK0 99 aa1.49□□□□□ -2.17
HSH155YMR288W FMP49A0A023PZB3 126 aa1.49□□□□□ -2.17
HSH155YMR288W YPR096CO13587 100 aa1.49□□□□□ -2.17
HSH155YMR288W MAG1P22134 296 aaKnown RBP1.49□□□□□ -2.17
HSH155YMR288W MRPL20P22354 195 aaPredicted RBP1.49□□□□□ -2.17
HSH155YMR288W MIC19P43594 170 aa1.49□□□□□ -2.17
HSH155YMR288W FIP1P45976 327 aa1.49□□□□□ -2.17
HSH155YMR288W OST2P46964 130 aa1.49□□□□□ -2.17
HSH155YMR288W LCB3P47013 409 aa1.49□□□□□ -2.17
HSH155YMR288W OSH6Q02201 448 aa1.49□□□□□ -2.17
HSH155YMR288W VPS28Q02767 242 aa1.49□□□□□ -2.17
HSH155YMR288W SLD7Q08457 257 aa1.49□□□□□ -2.17
HSH155YMR288W MBF1O14467 151 aaKnown RBP1.48□□□□□ -2.17
HSH155YMR288W YER039C-AP0CD97 72 aa1.48□□□□□ -2.17
HSH155YMR288W YHR214C-DP0CX93 97 aa1.48□□□□□ -2.17
HSH155YMR288W SNC2P33328 115 aa1.48□□□□□ -2.17
HSH155YMR288W SHB17P36136 271 aaKnown RBP1.48□□□□□ -2.17
HSH155YMR288W POP8P38208 133 aa1.48□□□□□ -2.17
HSH155YMR288W YFL051CP43552 160 aa1.48□□□□□ -2.17
HSH155YMR288W SFT1P43682 97 aa1.48□□□□□ -2.17
HSH155YMR288W RPE1P46969 238 aa1.48□□□□□ -2.17
HSH155YMR288W SDS23P53172 527 aa1.48□□□□□ -2.17
HSH155YMR288W YGR039WP53225 103 aa1.48□□□□□ -2.17
HSH155YMR288W GRH1Q04410 372 aaKnown RBP1.48□□□□□ -2.17
HSH155YMR288W YPL245WQ12179 454 aaKnown RBP1.48□□□□□ -2.17
HSH155YMR288W Q0255P03881 472 aa1.48□□□□□ -2.17
HSH155YMR288W SIR2P06700 562 aa1.48□□□□□ -2.17
HSH155YMR288W YFR010W-AP0C5N0 62 aa1.48□□□□□ -2.17
HSH155YMR288W URA10P30402 227 aa1.48□□□□□ -2.17
HSH155YMR288W SEC17P32602 292 aa1.48□□□□□ -2.17
HSH155YMR288W YEL045CP32616 141 aa1.48□□□□□ -2.17
HSH155YMR288W YER181CP40097 107 aa1.48□□□□□ -2.17
HSH155YMR288W GVP36P40531 326 aaKnown RBP1.48□□□□□ -2.17
HSH155YMR288W BOL2P53082 120 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms