RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W PET54P10834 293 aa2.48□□□□□ -2.01
YML040WYML040W SRP102P36057 244 aaPredicted RBP2.48□□□□□ -2.01
YML040WYML040W RIO2P40160 425 aaKnown RBP2.48□□□□□ -2.01
YML040WYML040W ALB1P47019 175 aaPredicted RBP2.48□□□□□ -2.01
YML040WYML040W YAE1P47118 141 aaPredicted RBP2.48□□□□□ -2.01
YML040WYML040W RRP17Q04031 235 aaPredicted RBP2.48□□□□□ -2.01
YML040WYML040W ATG41Q12048 136 aa2.48□□□□□ -2.01
YML040WYML040W MAK31P23059 88 aa2.47□□□□□ -2.01
YML040WYML040W PTC1P35182 281 aa2.47□□□□□ -2.01
YML040WYML040W TRM3Q07527 1436 aa2.47□□□□□ -2.01
YML040WYML040W YLR422WQ06409 1932 aa2.47□□□□□ -2.01
YML040WYML040W YOL162WP0CF19 215 aa2.46□□□□□ -2.02
YML040WYML040W RPB7P34087 171 aa2.46□□□□□ -2.02
YML040WYML040W IPI1P38803 334 aaPredicted RBP2.46□□□□□ -2.02
YML040WYML040W YER181CP40097 107 aa2.46□□□□□ -2.02
YML040WYML040W CCC1P47818 322 aa2.46□□□□□ -2.02
YML040WYML040W HHT1P61830 136 aa2.46□□□□□ -2.02
YML040WYML040W GRX5Q02784 150 aa2.46□□□□□ -2.02
YML040WYML040W QCR8P08525 94 aa2.45□□□□□ -2.02
YML040WYML040W HTD2P38790 280 aaKnown RBP2.45□□□□□ -2.02
YML040WYML040W HYR1P40581 163 aaKnown RBP2.45□□□□□ -2.02
YML040WYML040W PKR1Q03880 122 aaKnown RBP2.45□□□□□ -2.02
YML040WYML040W YMR252CQ04814 134 aa2.45□□□□□ -2.02
YML040WYML040W YPR114WQ06107 315 aa2.45□□□□□ -2.02
YML040WYML040W CCS1P40202 249 aaKnown RBP2.44□□□□□ -2.02
YML040WYML040W CWC27Q02770 301 aa2.44□□□□□ -2.02
YML040WYML040W LIP1Q03579 150 aa2.44□□□□□ -2.02
YML040WYML040W YMR320WQ04897 101 aa2.44□□□□□ -2.02
YML040WYML040W ATG10Q07879 167 aa2.44□□□□□ -2.02
YML040WYML040W STF2P16965 84 aa2.43□□□□□ -2.02
YML040WYML040W UPS3Q04006 179 aa2.43□□□□□ -2.02
YML040WYML040W ELP6Q04868 273 aa2.43□□□□□ -2.02
YML040WYML040W YNL146C-AQ3E7Z1 64 aa2.43□□□□□ -2.02
YML040WYML040W YPT31P38555 223 aaKnown RBP2.42□□□□□ -2.02
YML040WYML040W YHL042WP38729 150 aa2.42□□□□□ -2.02
YML040WYML040W YNR064CP53750 290 aa2.42□□□□□ -2.02
YML040WYML040W CYR1P08678 2026 aaKnown RBP2.42□□□□□ -2.02
YML040WYML040W INO4P13902 151 aa2.42□□□□□ -2.02
YML040WYML040W FPR1P20081 114 aaKnown RBP2.42□□□□□ -2.02
YML040WYML040W MRS4P23500 304 aa2.42□□□□□ -2.02
YML040WYML040W ACP1P32463 125 aa2.42□□□□□ -2.02
YML040WYML040W RCE1Q03530 315 aa2.42□□□□□ -2.02
YML040WYML040W RAV2Q03956 351 aa2.42□□□□□ -2.02
YML040WYML040W YPD1Q07688 167 aa2.42□□□□□ -2.02
YML040WYML040W SPS2P08459 502 aa2.41□□□□□ -2.02
YML040WYML040W YBL010CP32788 280 aa2.41□□□□□ -2.02
YML040WYML040W MRPL24P36525 258 aaPredicted RBP2.41□□□□□ -2.02
YML040WYML040W YEL067CP39978 195 aa2.41□□□□□ -2.02
YML040WYML040W YEL008WP40001 126 aa2.41□□□□□ -2.02
YML040WYML040W YJL218WP40892 196 aaKnown RBP2.41□□□□□ -2.02
YML040WYML040W YGL193CP53097 103 aa2.41□□□□□ -2.02
YML040WYML040W PHO13P19881 312 aa2.4□□□□□ -2.03
YML040WYML040W SPT14P32363 452 aa2.4□□□□□ -2.03
YML040WYML040W ETR1P38071 380 aa2.4□□□□□ -2.03
YML040WYML040W YFL065CP43539 102 aa2.4□□□□□ -2.03
YML040WYML040W YJR015WP47090 510 aa2.4□□□□□ -2.03
YML040WYML040W MZM1Q03429 123 aaPredicted RBP2.4□□□□□ -2.03
YML040WYML040W YML079WQ03629 201 aa2.4□□□□□ -2.03
YML040WYML040W YDL241WQ07738 123 aa2.4□□□□□ -2.03
YML040WYML040W YMR030W-AQ3E760 96 aa2.4□□□□□ -2.03
YML040WYML040W DUR1,2P32528 1835 aaKnown RBP2.39□□□□□ -2.03
YML040WYML040W SEN2P16658 377 aa2.39□□□□□ -2.03
YML040WYML040W MOB1P40484 314 aa2.39□□□□□ -2.03
YML040WYML040W UBC7Q02159 165 aa2.39□□□□□ -2.03
YML040WYML040W YDR391CQ04170 232 aa2.39□□□□□ -2.03
YML040WYML040W YOR1P53049 1477 aa2.38□□□□□ -2.03
YML040WYML040W TAR1Q8TGM6 124 aa2.38□□□□□ -2.03
YML040WYML040W DDR48P18899 430 aaKnown RBP2.37□□□□□ -2.03
YML040WYML040W SOK1P40317 901 aa2.37□□□□□ -2.03
YML040WYML040W YGR269WP40326 108 aa2.37□□□□□ -2.03
YML040WYML040W RBL2P48606 106 aaKnown RBP2.37□□□□□ -2.03
YML040WYML040W UIP4Q08926 304 aa2.37□□□□□ -2.03
YML040WYML040W BEM2P39960 2167 aaKnown RBP2.36□□□□□ -2.03
YML040WYML040W SRP21P32342 167 aa2.36□□□□□ -2.03
YML040WYML040W HRD1Q08109 551 aa2.36□□□□□ -2.03
YML040WYML040W COA3Q3E7B2 85 aa2.35□□□□□ -2.03
YML040WYML040W AQY2P0CD90 149 aa2.34□□□□□ -2.04
YML040WYML040W YAP3P38749 330 aa2.34□□□□□ -2.04
YML040WYML040W YGR201CP42936 225 aa2.34□□□□□ -2.04
YML040WYML040W YCL042WP25572 119 aa2.33□□□□□ -2.04
YML040WYML040W GEP7P53171 287 aa2.33□□□□□ -2.04
YML040WYML040W MET31Q03081 177 aa2.33□□□□□ -2.04
YML040WYML040W RFU1Q08003 200 aa2.33□□□□□ -2.04
YML040WYML040W RPS25BP0C0T4 108 aaKnown RBP2.32□□□□□ -2.04
YML040WYML040W HSP12P22943 109 aaKnown RBP2.32□□□□□ -2.04
YML040WYML040W AVO2Q04749 426 aa2.32□□□□□ -2.04
YML040WYML040W YDL157CQ12082 118 aa2.32□□□□□ -2.04
YML040WYML040W RPS25AQ3E792 108 aaPredicted RBP2.32□□□□□ -2.04
YML040WYML040W COF1Q03048 143 aaKnown RBP2.31□□□□□ -2.04
YML040WYML040W EST3Q03096 181 aa2.31□□□□□ -2.04
YML040WYML040W YBR242WP38331 238 aa2.3□□□□□ -2.04
YML040WYML040W CIN5P40917 295 aa2.3□□□□□ -2.04
YML040WYML040W GLC8P41818 229 aa2.3□□□□□ -2.04
YML040WYML040W YDR366CP87287 132 aa2.3□□□□□ -2.04
YML040WYML040W IRC19Q07843 230 aa2.3□□□□□ -2.04
YML040WYML040W SCS22Q6Q595 175 aa2.3□□□□□ -2.04
YML040WYML040W RIB3Q99258 208 aa2.3□□□□□ -2.04
YML040WYML040W ADE6P38972 1358 aaKnown RBP2.29□□□□□ -2.04
YML040WYML040W AHT1P29589 182 aa2.29□□□□□ -2.04
YML040WYML040W SHB17P36136 271 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms