RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeast

Gene YPT6, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT6	YLR262C	TIM13	P53299	105 aa		0.54	□□□□□ -2.32
YPT6	YLR262C	YDC1	Q02896	317 aa		0.54	□□□□□ -2.32
YPT6	YLR262C	HPT1	Q04178	221 aa	Known RBP	0.54	□□□□□ -2.32
YPT6	YLR262C	KEI1	Q06346	221 aa		0.54	□□□□□ -2.32
YPT6	YLR262C	PEX11	Q12462	236 aa		0.54	□□□□□ -2.32
YPT6	YLR262C	PRE1	P22141	198 aa	Known RBP	0.53	□□□□□ -2.32
YPT6	YLR262C	YEL073C	P39974	107 aa		0.53	□□□□□ -2.32
YPT6	YLR262C	YEL028W	P39989	153 aa		0.53	□□□□□ -2.32
YPT6	YLR262C	YGR269W	P40326	108 aa		0.53	□□□□□ -2.32
YPT6	YLR262C	TMA23	Q03525	211 aa		0.53	□□□□□ -2.32
YPT6	YLR262C	GRX3	Q03835	250 aa		0.53	□□□□□ -2.32
YPT6	YLR262C	YET3	Q07451	203 aa		0.53	□□□□□ -2.32
YPT6	YLR262C	TAF2	P23255	1407 aa		0.53	□□□□□ -2.32
YPT6	YLR262C	YCR001W	P25347	104 aa		0.52	□□□□□ -2.33
YPT6	YLR262C	GLR1	P41921	483 aa	Known RBP	0.52	□□□□□ -2.33
YPT6	YLR262C	RIF1	P29539	1916 aa		0.52	□□□□□ -2.33
YPT6	YLR262C	YML079W	Q03629	201 aa		0.51	□□□□□ -2.33
YPT6	YLR262C	KIN28	P06242	306 aa		0.5	□□□□□ -2.33
YPT6	YLR262C	PAC10	P48363	199 aa		0.5	□□□□□ -2.33
YPT6	YLR262C	SYM1	Q06563	197 aa		0.5	□□□□□ -2.33
YPT6	YLR262C	TRR1	P29509	319 aa	Known RBP	0.49	□□□□□ -2.33
YPT6	YLR262C	ATP7	P30902	174 aa		0.49	□□□□□ -2.33
YPT6	YLR262C	NQM1	P53228	333 aa	Predicted RBP	0.49	□□□□□ -2.33
YPT6	YLR262C	YDL241W	Q07738	123 aa		0.49	□□□□□ -2.33
YPT6	YLR262C	PTC1	P35182	281 aa		0.48	□□□□□ -2.33
YPT6	YLR262C	GEP7	P53171	287 aa		0.48	□□□□□ -2.33
YPT6	YLR262C	LIP1	Q03579	150 aa		0.48	□□□□□ -2.33
YPT6	YLR262C	RPS25B	P0C0T4	108 aa	Known RBP	0.47	□□□□□ -2.33
YPT6	YLR262C	CIN5	P40917	295 aa		0.47	□□□□□ -2.33
YPT6	YLR262C	JAC1	P53193	184 aa		0.47	□□□□□ -2.33
YPT6	YLR262C	YIP3	P53633	176 aa		0.47	□□□□□ -2.33
YPT6	YLR262C	RPS25A	Q3E792	108 aa	Predicted RBP	0.47	□□□□□ -2.33
YPT6	YLR262C	SEC72	P39742	193 aa	Known RBP	0.46	□□□□□ -2.34
YPT6	YLR262C	SED1	Q01589	338 aa		0.46	□□□□□ -2.34
YPT6	YLR262C	THI74	Q04083	370 aa		0.46	□□□□□ -2.34
YPT6	YLR262C	VAM10	Q08474	114 aa		0.46	□□□□□ -2.34
YPT6	YLR262C	UIP4	Q08926	304 aa		0.46	□□□□□ -2.34
YPT6	YLR262C	CMC4	Q3E7A9	73 aa		0.46	□□□□□ -2.34
YPT6	YLR262C	SPS2	P08459	502 aa		0.45	□□□□□ -2.34
YPT6	YLR262C	HHY1	P39982	102 aa		0.45	□□□□□ -2.34
YPT6	YLR262C	GIM3	P53900	129 aa		0.45	□□□□□ -2.34
YPT6	YLR262C	YHR213W-B	Q8TGK1	99 aa		0.45	□□□□□ -2.34
YPT6	YLR262C	SPT14	P32363	452 aa		0.44	□□□□□ -2.34
YPT6	YLR262C	NUF2	P33895	451 aa		0.44	□□□□□ -2.34
YPT6	YLR262C	XPT1	P47165	209 aa		0.44	□□□□□ -2.34
YPT6	YLR262C	INO4	P13902	151 aa		0.43	□□□□□ -2.34
YPT6	YLR262C	YBR027C	P38220	110 aa		0.43	□□□□□ -2.34
YPT6	YLR262C	SRP14	P38985	146 aa		0.43	□□□□□ -2.34
YPT6	YLR262C	YEL014C	P39999	101 aa		0.43	□□□□□ -2.34
YPT6	YLR262C	APS3	P47064	194 aa		0.43	□□□□□ -2.34
YPT6	YLR262C	SPA2	P23201	1466 aa	Known RBP	0.42	□□□□□ -2.34
YPT6	YLR262C	PRP8	P33334	2413 aa	Known RBP	0.42	□□□□□ -2.34
YPT6	YLR262C	HFA1	P32874	2273 aa		0.42	□□□□□ -2.34
YPT6	YLR262C	RAD51	P25454	400 aa		0.42	□□□□□ -2.34
YPT6	YLR262C	HSP150	P32478	413 aa		0.42	□□□□□ -2.34
YPT6	YLR262C	YNL122C	P53921	115 aa	Predicted RBP	0.42	□□□□□ -2.34
YPT6	YLR262C	HSK3	P69852	69 aa		0.41	□□□□□ -2.34
YPT6	YLR262C	YPR114W	Q06107	315 aa		0.41	□□□□□ -2.34
YPT6	YLR262C	ROM2	P51862	1356 aa	Known RBP	0.41	□□□□□ -2.34
YPT6	YLR262C	HSL1	P34244	1518 aa		0.4	□□□□□ -2.35
YPT6	YLR262C	ADE6	P38972	1358 aa	Known RBP	0.4	□□□□□ -2.35
YPT6	YLR262C	YNR064C	P53750	290 aa		0.39	□□□□□ -2.35
YPT6	YLR262C	PLP1	Q04004	230 aa		0.39	□□□□□ -2.35
YPT6	YLR262C	ATG10	Q07879	167 aa		0.39	□□□□□ -2.35
YPT6	YLR262C	YLR050C	Q12155	161 aa	Known RBP	0.39	□□□□□ -2.35
YPT6	YLR262C	MGR2	Q02889	113 aa		0.38	□□□□□ -2.35
YPT6	YLR262C	YLR046C	Q12253	270 aa		0.38	□□□□□ -2.35
YPT6	YLR262C	CMD1	P06787	147 aa	Known RBP	0.37	□□□□□ -2.35
YPT6	YLR262C	YPT31	P38555	223 aa	Known RBP	0.37	□□□□□ -2.35
YPT6	YLR262C	CCC1	P47818	322 aa		0.37	□□□□□ -2.35
YPT6	YLR262C	GLC8	P41818	229 aa		0.36	□□□□□ -2.35
YPT6	YLR262C	IPT1	P38954	527 aa		0.35	□□□□□ -2.35
YPT6	YLR262C	ATP5	P09457	212 aa		0.34	□□□□□ -2.36
YPT6	YLR262C	RPL35A	P0CX84	120 aa	Known RBP	0.34	□□□□□ -2.36
YPT6	YLR262C	RPL35B	P0CX85	120 aa	Known RBP	0.34	□□□□□ -2.36
YPT6	YLR262C	UBC6	P33296	250 aa	Predicted RBP	0.34	□□□□□ -2.36
YPT6	YLR262C	SRP102	P36057	244 aa	Predicted RBP	0.34	□□□□□ -2.36
YPT6	YLR262C	ECM31	P38122	312 aa		0.34	□□□□□ -2.36
YPT6	YLR262C	EGD2	P38879	174 aa	Known RBP	0.34	□□□□□ -2.36
YPT6	YLR262C	YDR102C	Q03864	110 aa		0.34	□□□□□ -2.36
YPT6	YLR262C	YOR072W	Q08486	104 aa		0.34	□□□□□ -2.36
YPT6	YLR262C	HAP2	P06774	265 aa		0.33	□□□□□ -2.36
YPT6	YLR262C	ORM1	P53224	222 aa		0.33	□□□□□ -2.36
YPT6	YLR262C	YNL140C	P53910	189 aa		0.33	□□□□□ -2.36
YPT6	YLR262C	RPS22A	P0C0W1	130 aa	Known RBP	0.32	□□□□□ -2.36
YPT6	YLR262C	HYP2	P23301	157 aa	Known RBP	0.32	□□□□□ -2.36
YPT6	YLR262C	HTD2	P38790	280 aa	Known RBP	0.32	□□□□□ -2.36
YPT6	YLR262C	YGL101W	P53144	215 aa		0.32	□□□□□ -2.36
YPT6	YLR262C	TMA20	P89886	181 aa	Predicted RBP	0.32	□□□□□ -2.36
YPT6	YLR262C	NMA1	Q06178	401 aa	Known RBP	0.32	□□□□□ -2.36
YPT6	YLR262C	PRM3	Q08931	133 aa		0.32	□□□□□ -2.36
YPT6	YLR262C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.32	□□□□□ -2.36
YPT6	YLR262C	MRS4	P23500	304 aa		0.31	□□□□□ -2.36
YPT6	YLR262C	FMN1	Q03778	218 aa		0.31	□□□□□ -2.36
YPT6	YLR262C	YGL041W-A	P0C5N3	154 aa		0.3	□□□□□ -2.36
YPT6	YLR262C	ATG8	P38182	117 aa	RIP-Chip data	0.3	□□□□□ -2.36	not detected
YPT6	YLR262C	YMR141C	P40211	102 aa		0.3	□□□□□ -2.36
YPT6	YLR262C	YGL193C	P53097	103 aa		0.3	□□□□□ -2.36
YPT6	YLR262C	ATG38	Q05789	226 aa	Known RBP	0.3	□□□□□ -2.36
YPT6	YLR262C	RPL43A	P0CX25	92 aa	Known RBP	0.29	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms