RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C RPL39P04650 51 aa2.38□□□□□ -2.03
USB1YLR132C YPR170W-BP0C5R9 85 aa2.38□□□□□ -2.03
USB1YLR132C FBA1P14540 359 aaKnown RBP2.38□□□□□ -2.03
USB1YLR132C PET9P18239 318 aaKnown RBP2.38□□□□□ -2.03
USB1YLR132C ERG28P40030 148 aa2.38□□□□□ -2.03
USB1YLR132C SMD3P43321 101 aaKnown RBP2.38□□□□□ -2.03
USB1YLR132C TOS8P53147 276 aa2.38□□□□□ -2.03
USB1YLR132C PRM8P53174 237 aa2.38□□□□□ -2.03
USB1YLR132C ALG13P53178 202 aa2.38□□□□□ -2.03
USB1YLR132C YDR391CQ04170 232 aa2.38□□□□□ -2.03
USB1YLR132C ATG38Q05789 226 aaKnown RBP2.38□□□□□ -2.03
USB1YLR132C CDC28P00546 298 aaKnown RBP2.37□□□□□ -2.03
USB1YLR132C ATG22P25568 528 aa2.37□□□□□ -2.03
USB1YLR132C PEX4P29340 183 aa2.37□□□□□ -2.03
USB1YLR132C CBT1P36038 271 aaPredicted RBP2.37□□□□□ -2.03
USB1YLR132C YBR032WP38223 100 aa2.37□□□□□ -2.03
USB1YLR132C ERG25P53045 309 aa2.37□□□□□ -2.03
USB1YLR132C YGL235WP53071 178 aa2.37□□□□□ -2.03
USB1YLR132C GEP7P53171 287 aa2.37□□□□□ -2.03
USB1YLR132C YDR248CQ03786 193 aa2.37□□□□□ -2.03
USB1YLR132C NEJ1Q06148 342 aa2.37□□□□□ -2.03
USB1YLR132C YPR127WQ06494 345 aa2.37□□□□□ -2.03
USB1YLR132C USB1Q12208 290 aaKnown RBP2.37□□□□□ -2.03
USB1YLR132C YPL229WQ99395 206 aa2.37□□□□□ -2.03
USB1YLR132C GRX2P17695 143 aaKnown RBP2.36□□□□□ -2.03
USB1YLR132C SKG1P36169 355 aa2.36□□□□□ -2.03
USB1YLR132C RTC3P38804 111 aaPredicted RBP2.36□□□□□ -2.03
USB1YLR132C YNL194CP40169 301 aa2.36□□□□□ -2.03
USB1YLR132C FLX1P40464 311 aa2.36□□□□□ -2.03
USB1YLR132C YGR201CP42936 225 aa2.36□□□□□ -2.03
USB1YLR132C FAR7P43592 221 aa2.36□□□□□ -2.03
USB1YLR132C MPC1P53157 130 aaKnown RBP2.36□□□□□ -2.03
USB1YLR132C CGR1P53188 120 aa2.36□□□□□ -2.03
USB1YLR132C YNR062CP53748 327 aa2.36□□□□□ -2.03
USB1YLR132C MRPS8Q03799 155 aa2.36□□□□□ -2.03
USB1YLR132C LPP1Q04396 274 aa2.36□□□□□ -2.03
USB1YLR132C YKL183C-AQ3E765 70 aa2.36□□□□□ -2.03
USB1YLR132C BOL1Q3E793 110 aa2.36□□□□□ -2.03
USB1YLR132C OAC1P32332 324 aa2.35□□□□□ -2.03
USB1YLR132C ERV15P38312 142 aa2.35□□□□□ -2.03
USB1YLR132C IRC18P47056 224 aa2.35□□□□□ -2.03
USB1YLR132C SNZ1Q03148 297 aa2.35□□□□□ -2.03
USB1YLR132C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
USB1YLR132C IDH1P28834 360 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
USB1YLR132C SUA7P29055 345 aaPredicted RBP2.34□□□□□ -2.03
USB1YLR132C APS1P35181 156 aa2.34□□□□□ -2.03
USB1YLR132C SRY1P36007 326 aa2.34□□□□□ -2.03
USB1YLR132C VTC1P40046 129 aaRIP-Chip data2.34□□□□□ -2.03not detected
USB1YLR132C YJL027CP47063 138 aaPredicted RBP2.34□□□□□ -2.03
USB1YLR132C MGA1P53050 456 aa2.34□□□□□ -2.03
USB1YLR132C YDC1Q02896 317 aa2.34□□□□□ -2.03
USB1YLR132C YMR226CQ05016 267 aaKnown RBP2.34□□□□□ -2.03
USB1YLR132C RNH202Q05635 350 aa2.34□□□□□ -2.03
USB1YLR132C ARR2Q06597 130 aa2.34□□□□□ -2.03
USB1YLR132C YHR086W-AQ3E746 53 aa2.34□□□□□ -2.03
USB1YLR132C YHR139C-AO13536 103 aa2.33□□□□□ -2.04
USB1YLR132C GCN3P14741 305 aa2.33□□□□□ -2.04
USB1YLR132C MRPL28P36527 147 aa2.33□□□□□ -2.04
USB1YLR132C MTW1P39731 289 aa2.33□□□□□ -2.04
USB1YLR132C RMD6P39975 231 aa2.33□□□□□ -2.04
USB1YLR132C IRC22P40006 225 aa2.33□□□□□ -2.04
USB1YLR132C YKE4P40544 346 aa2.33□□□□□ -2.04
USB1YLR132C DML1Q03652 475 aa2.33□□□□□ -2.04
USB1YLR132C COX5BP00425 151 aa2.32□□□□□ -2.04
USB1YLR132C MRPS28P21771 286 aa2.32□□□□□ -2.04
USB1YLR132C RPC19P28000 142 aaKnown RBP2.32□□□□□ -2.04
USB1YLR132C ARC19P33204 171 aaKnown RBP2.32□□□□□ -2.04
USB1YLR132C TRM5P38793 499 aa2.32□□□□□ -2.04
USB1YLR132C FIP1P45976 327 aa2.32□□□□□ -2.04
USB1YLR132C BAT2P47176 376 aaKnown RBP2.32□□□□□ -2.04
USB1YLR132C TDA8Q6B2U8 126 aa2.32□□□□□ -2.04
USB1YLR132C ARG80P07249 177 aa2.31□□□□□ -2.04
USB1YLR132C YOL162WP0CF19 215 aa2.31□□□□□ -2.04
USB1YLR132C AUA1P32450 94 aa2.31□□□□□ -2.04
USB1YLR132C TCA17P32613 152 aa2.31□□□□□ -2.04
USB1YLR132C NUF2P33895 451 aa2.31□□□□□ -2.04
USB1YLR132C PGD1P40356 397 aa2.31□□□□□ -2.04
USB1YLR132C PDR17P53844 350 aa2.31□□□□□ -2.04
USB1YLR132C NSL1Q12143 216 aa2.31□□□□□ -2.04
USB1YLR132C YMR105W-AQ8TGS8 64 aa2.31□□□□□ -2.04
USB1YLR132C SIR2P06700 562 aa2.3□□□□□ -2.04
USB1YLR132C YRA2P36036 203 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
USB1YLR132C MPM1P40364 252 aa2.3□□□□□ -2.04
USB1YLR132C RPL33BP41056 107 aaKnown RBP2.3□□□□□ -2.04
USB1YLR132C CWC23P52868 283 aaPredicted RBP2.3□□□□□ -2.04
USB1YLR132C NUP49Q02199 472 aa2.3□□□□□ -2.04
USB1YLR132C DIG2Q03373 323 aaKnown RBP2.3□□□□□ -2.04
USB1YLR132C AIM36Q03798 255 aa2.3□□□□□ -2.04
USB1YLR132C YDR157WA0A023PZE8 133 aa2.29□□□□□ -2.04
USB1YLR132C REP2P03872 296 aa2.29□□□□□ -2.04
USB1YLR132C YLR156WP0CE96 114 aa2.29□□□□□ -2.04
USB1YLR132C YLR159WP0CE97 114 aa2.29□□□□□ -2.04
USB1YLR132C YLR161WP0CE98 114 aa2.29□□□□□ -2.04
USB1YLR132C ASF2P32448 525 aaPredicted RBP2.29□□□□□ -2.04
USB1YLR132C YHR022CP38763 256 aa2.29□□□□□ -2.04
USB1YLR132C IKI1P38874 309 aa2.29□□□□□ -2.04
USB1YLR132C FCY21P40039 528 aa2.29□□□□□ -2.04
USB1YLR132C GET1P53192 235 aa2.29□□□□□ -2.04
USB1YLR132C CYT2Q00873 224 aa2.29□□□□□ -2.04
USB1YLR132C MRPS17Q03246 237 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 85.3 ms