RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C RAD6P06104 172 aa0.35□□□□□ -2.35
AFB1YLR040C PRE1P22141 198 aaKnown RBP0.35□□□□□ -2.35
AFB1YLR040C YEL073CP39974 107 aa0.35□□□□□ -2.35
AFB1YLR040C HHY1P39982 102 aa0.35□□□□□ -2.35
AFB1YLR040C MOB1P40484 314 aa0.35□□□□□ -2.35
AFB1YLR040C TIM13P53299 105 aa0.34□□□□□ -2.36
AFB1YLR040C SED1Q01589 338 aa0.34□□□□□ -2.36
AFB1YLR040C GRX3Q03835 250 aa0.34□□□□□ -2.36
AFB1YLR040C YDL157CQ12082 118 aa0.34□□□□□ -2.36
AFB1YLR040C CSH1P38287 376 aa0.33□□□□□ -2.36
AFB1YLR040C YEL028WP39989 153 aa0.33□□□□□ -2.36
AFB1YLR040C YGR269WP40326 108 aa0.33□□□□□ -2.36
AFB1YLR040C HPT1Q04178 221 aaKnown RBP0.33□□□□□ -2.36
AFB1YLR040C GRE1Q08969 168 aa0.33□□□□□ -2.36
AFB1YLR040C KIN28P06242 306 aa0.32□□□□□ -2.36
AFB1YLR040C YML079WQ03629 201 aa0.32□□□□□ -2.36
AFB1YLR040C YDL241WQ07738 123 aa0.32□□□□□ -2.36
AFB1YLR040C CIN5P40917 295 aa0.31□□□□□ -2.36
AFB1YLR040C SPS2P08459 502 aa0.3□□□□□ -2.36
AFB1YLR040C RPS25BP0C0T4 108 aaKnown RBP0.3□□□□□ -2.36
AFB1YLR040C YBR027CP38220 110 aa0.3□□□□□ -2.36
AFB1YLR040C HOP2P53187 214 aa0.3□□□□□ -2.36
AFB1YLR040C JAC1P53193 184 aa0.3□□□□□ -2.36
AFB1YLR040C NQM1P53228 333 aaPredicted RBP0.3□□□□□ -2.36
AFB1YLR040C SYM1Q06563 197 aa0.3□□□□□ -2.36
AFB1YLR040C YET3Q07451 203 aa0.3□□□□□ -2.36
AFB1YLR040C HRD1Q08109 551 aa0.3□□□□□ -2.36
AFB1YLR040C RPS25AQ3E792 108 aaPredicted RBP0.3□□□□□ -2.36
AFB1YLR040C YHR213W-BQ8TGK1 99 aa0.3□□□□□ -2.36
AFB1YLR040C ATP7P30902 174 aa0.29□□□□□ -2.36
AFB1YLR040C PEX11Q12462 236 aa0.29□□□□□ -2.36
AFB1YLR040C CMC4Q3E7A9 73 aa0.29□□□□□ -2.36
AFB1YLR040C TRM3Q07527 1436 aa0.29□□□□□ -2.36
AFB1YLR040C SPT14P32363 452 aa0.28□□□□□ -2.36
AFB1YLR040C GLR1P41921 483 aaKnown RBP0.28□□□□□ -2.36
AFB1YLR040C XPT1P47165 209 aa0.28□□□□□ -2.36
AFB1YLR040C LIP1Q03579 150 aa0.28□□□□□ -2.36
AFB1YLR040C TAF2P23255 1407 aa0.28□□□□□ -2.37
AFB1YLR040C INO4P13902 151 aa0.27□□□□□ -2.37
AFB1YLR040C CDC39P25655 2108 aaKnown RBP0.27□□□□□ -2.37
AFB1YLR040C GEP7P53171 287 aa0.27□□□□□ -2.37
AFB1YLR040C THI74Q04083 370 aa0.27□□□□□ -2.37
AFB1YLR040C ROM2P51862 1356 aaKnown RBP0.27□□□□□ -2.37
AFB1YLR040C HSP150P32478 413 aa0.26□□□□□ -2.37
AFB1YLR040C NUF2P33895 451 aa0.26□□□□□ -2.37
AFB1YLR040C YEL014CP39999 101 aa0.26□□□□□ -2.37
AFB1YLR040C GLC8P41818 229 aa0.26□□□□□ -2.37
AFB1YLR040C APS3P47064 194 aa0.26□□□□□ -2.37
AFB1YLR040C CCC1P47818 322 aa0.26□□□□□ -2.37
AFB1YLR040C YIP3P53633 176 aa0.26□□□□□ -2.37
AFB1YLR040C YNL122CP53921 115 aaPredicted RBP0.26□□□□□ -2.37
AFB1YLR040C ATG10Q07879 167 aa0.26□□□□□ -2.37
AFB1YLR040C PRM3Q08931 133 aa0.26□□□□□ -2.37
AFB1YLR040C TRR1P29509 319 aaKnown RBP0.25□□□□□ -2.37
AFB1YLR040C YPR114WQ06107 315 aa0.25□□□□□ -2.37
AFB1YLR040C VAM10Q08474 114 aa0.25□□□□□ -2.37
AFB1YLR040C UIP4Q08926 304 aa0.25□□□□□ -2.37
AFB1YLR040C PTC1P35182 281 aa0.24□□□□□ -2.37
AFB1YLR040C YPT31P38555 223 aaKnown RBP0.24□□□□□ -2.37
AFB1YLR040C HSK3P69852 69 aa0.24□□□□□ -2.37
AFB1YLR040C SEC72P39742 193 aaKnown RBP0.23□□□□□ -2.37
AFB1YLR040C MGR2Q02889 113 aa0.23□□□□□ -2.37
AFB1YLR040C RAD51P25454 400 aa0.22□□□□□ -2.37
AFB1YLR040C ATG8P38182 117 aaRIP-Chip data0.22□□□□□ -2.37not detected
AFB1YLR040C YDR102CQ03864 110 aa0.22□□□□□ -2.37
AFB1YLR040C PLP1Q04004 230 aa0.22□□□□□ -2.37
AFB1YLR040C YLR050CQ12155 161 aaKnown RBP0.22□□□□□ -2.37
AFB1YLR040C RPS22AP0C0W1 130 aaKnown RBP0.2□□□□□ -2.38
AFB1YLR040C UBC6P33296 250 aaPredicted RBP0.2□□□□□ -2.38
AFB1YLR040C SRP14P38985 146 aa0.2□□□□□ -2.38
AFB1YLR040C YNR064CP53750 290 aa0.2□□□□□ -2.38
AFB1YLR040C GIM3P53900 129 aa0.2□□□□□ -2.38
AFB1YLR040C RPS22BQ3E7Y3 130 aaKnown RBP0.2□□□□□ -2.38
AFB1YLR040C HAP2P06774 265 aa0.19□□□□□ -2.38
AFB1YLR040C MRS4P23500 304 aa0.19□□□□□ -2.38
AFB1YLR040C IPT1P38954 527 aa0.19□□□□□ -2.38
AFB1YLR040C YLR307C-AQ3E825 87 aa0.19□□□□□ -2.38
AFB1YLR040C RIB3Q99258 208 aa0.19□□□□□ -2.38
AFB1YLR040C ADE6P38972 1358 aaKnown RBP0.19□□□□□ -2.38
AFB1YLR040C YMR141CP40211 102 aa0.18□□□□□ -2.38
AFB1YLR040C YGL101WP53144 215 aa0.18□□□□□ -2.38
AFB1YLR040C YOR072WQ08486 104 aa0.18□□□□□ -2.38
AFB1YLR040C CMD1P06787 147 aaKnown RBP0.17□□□□□ -2.38
AFB1YLR040C SRP102P36057 244 aaPredicted RBP0.17□□□□□ -2.38
AFB1YLR040C HTD2P38790 280 aaKnown RBP0.17□□□□□ -2.38
AFB1YLR040C ORM1P53224 222 aa0.17□□□□□ -2.38
AFB1YLR040C YNL140CP53910 189 aa0.17□□□□□ -2.38
AFB1YLR040C SEN15Q04675 128 aa0.17□□□□□ -2.38
AFB1YLR040C YLR046CQ12253 270 aa0.17□□□□□ -2.38
AFB1YLR040C GSC2P40989 1895 aa0.16□□□□□ -2.38
AFB1YLR040C ATP5P09457 212 aa0.16□□□□□ -2.38
AFB1YLR040C RPL43AP0CX25 92 aaKnown RBP0.16□□□□□ -2.38
AFB1YLR040C RPL43BP0CX26 92 aa0.16□□□□□ -2.38
AFB1YLR040C HYP2P23301 157 aaKnown RBP0.16□□□□□ -2.38
AFB1YLR040C NMA1Q06178 401 aaKnown RBP0.16□□□□□ -2.38
AFB1YLR040C LAA1P39526 2014 aa0.16□□□□□ -2.38
AFB1YLR040C UBR1P19812 1950 aa0.15□□□□□ -2.38
AFB1YLR040C YLR157W-EP0CF00 54 aa0.15□□□□□ -2.39
AFB1YLR040C ECM31P38122 312 aa0.15□□□□□ -2.39
AFB1YLR040C EGD2P38879 174 aaKnown RBP0.15□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 85.4 ms