RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C ARF1P11076 181 aaKnown RBP3.38□□□□□ -1.87
SRP40YKR092C ATS1P31386 333 aa3.38□□□□□ -1.87
SRP40YKR092C ECM15P35195 104 aa3.38□□□□□ -1.87
SRP40YKR092C TEM1P38987 245 aa3.38□□□□□ -1.87
SRP40YKR092C MSL1P40567 111 aaPredicted RBP3.38□□□□□ -1.87
SRP40YKR092C SYS1P41544 203 aa3.38□□□□□ -1.87
SRP40YKR092C PFS2P42841 465 aaKnown RBP3.38□□□□□ -1.87
SRP40YKR092C SFT1P43682 97 aa3.38□□□□□ -1.87
SRP40YKR092C ARP3P47117 449 aaKnown RBP3.38□□□□□ -1.87
SRP40YKR092C HMS2P47175 358 aa3.38□□□□□ -1.87
SRP40YKR092C BXI1P48558 297 aa3.38□□□□□ -1.87
SRP40YKR092C ERG25P53045 309 aa3.38□□□□□ -1.87
SRP40YKR092C GEP7P53171 287 aa3.38□□□□□ -1.87
SRP40YKR092C YMR321CQ04898 105 aa3.38□□□□□ -1.87
SRP40YKR092C SCW10Q04951 389 aa3.38□□□□□ -1.87
SRP40YKR092C KEI1Q06346 221 aa3.38□□□□□ -1.87
SRP40YKR092C PAU23Q07987 124 aa3.38□□□□□ -1.87
SRP40YKR092C YOL131WQ08270 108 aa3.38□□□□□ -1.87
SRP40YKR092C YPL264CQ08980 353 aa3.38□□□□□ -1.87
SRP40YKR092C TIR4Q12218 487 aaPredicted RBP3.38□□□□□ -1.87
SRP40YKR092C RNH203Q12338 110 aa3.38□□□□□ -1.87
SRP40YKR092C PAU17Q12370 124 aa3.38□□□□□ -1.87
SRP40YKR092C YPL119C-AQ3E751 87 aa3.38□□□□□ -1.87
SRP40YKR092C YOR338WQ99326 363 aa3.38□□□□□ -1.87
SRP40YKR092C MOT1P32333 1867 aa3.38□□□□□ -1.87
SRP40YKR092C TIM9O74700 87 aa3.37□□□□□ -1.87
SRP40YKR092C ADH1P00330 348 aaKnown RBP3.37□□□□□ -1.87
SRP40YKR092C COX5AP00424 153 aa3.37□□□□□ -1.87
SRP40YKR092C YGL010WP25338 174 aa3.37□□□□□ -1.87
SRP40YKR092C ATG15P25641 520 aa3.37□□□□□ -1.87
SRP40YKR092C ERG24P32462 438 aaKnown RBP3.37□□□□□ -1.87
SRP40YKR092C ZRT1P32804 376 aa3.37□□□□□ -1.87
SRP40YKR092C ATG8P38182 117 aaRIP-Chip data3.37□□□□□ -1.87not detected
SRP40YKR092C MST28P39552 234 aa3.37□□□□□ -1.87
SRP40YKR092C OST1P41543 476 aaKnown RBP3.37□□□□□ -1.87
SRP40YKR092C YFR054CP43622 192 aa3.37□□□□□ -1.87
SRP40YKR092C BAT2P47176 376 aaKnown RBP3.37□□□□□ -1.87
SRP40YKR092C YGR219WP53307 113 aa3.37□□□□□ -1.87
SRP40YKR092C CDC14Q00684 551 aa3.37□□□□□ -1.87
SRP40YKR092C IRC15Q02733 499 aa3.37□□□□□ -1.87
SRP40YKR092C CSI2Q08054 341 aa3.37□□□□□ -1.87
SRP40YKR092C RRG7Q08774 242 aaPredicted RBP3.37□□□□□ -1.87
SRP40YKR092C YDR029WQ12111 104 aa3.37□□□□□ -1.87
SRP40YKR092C YKL018C-AQ3E7A7 99 aa3.37□□□□□ -1.87
SRP40YKR092C YNR034W-AQ3E841 98 aa3.37□□□□□ -1.87
SRP40YKR092C ECM12O13529 151 aa3.36□□□□□ -1.87
SRP40YKR092C RAS2P01120 322 aaKnown RBP3.36□□□□□ -1.87
SRP40YKR092C NOP1P15646 327 aaKnown RBP3.36□□□□□ -1.87
SRP40YKR092C MRPL20P22354 195 aaPredicted RBP3.36□□□□□ -1.87
SRP40YKR092C SPO13P23624 291 aa3.36□□□□□ -1.87
SRP40YKR092C SRP21P32342 167 aa3.36□□□□□ -1.87
SRP40YKR092C YKL102CP34249 101 aa3.36□□□□□ -1.87
SRP40YKR092C YBR063CP38083 404 aa3.36□□□□□ -1.87
SRP40YKR092C MBB1P39534 108 aa3.36□□□□□ -1.87
SRP40YKR092C YER188WP40103 239 aa3.36□□□□□ -1.87
SRP40YKR092C PRM5P40476 318 aa3.36□□□□□ -1.87
SRP40YKR092C YJL213WP40896 331 aa3.36□□□□□ -1.87
SRP40YKR092C YFL065CP43539 102 aa3.36□□□□□ -1.87
SRP40YKR092C MST27P53176 234 aa3.36□□□□□ -1.87
SRP40YKR092C HST4P53688 370 aa3.36□□□□□ -1.87
SRP40YKR092C AAH1P53909 347 aa3.36□□□□□ -1.87
SRP40YKR092C GRX5Q02784 150 aa3.36□□□□□ -1.87
SRP40YKR092C YMR090WQ04304 227 aaKnown RBP3.36□□□□□ -1.87
SRP40YKR092C FIT1Q04433 528 aa3.36□□□□□ -1.87
SRP40YKR092C YMR103CQ04436 120 aa3.36□□□□□ -1.87
SRP40YKR092C COQ10Q08058 207 aa3.36□□□□□ -1.87
SRP40YKR092C DGA1Q08650 418 aa3.36□□□□□ -1.87
SRP40YKR092C NDD1Q08887 554 aa3.36□□□□□ -1.87
SRP40YKR092C YPR203WQ08994 102 aa3.36□□□□□ -1.87
SRP40YKR092C RFM1Q12192 310 aa3.36□□□□□ -1.87
SRP40YKR092C YLR126CQ12288 251 aa3.36□□□□□ -1.87
SRP40YKR092C MPD1Q12404 318 aaKnown RBP3.36□□□□□ -1.87
SRP40YKR092C YBL112CQ3E7Y4 105 aa3.36□□□□□ -1.87
SRP40YKR092C YOS1Q3E834 85 aa3.36□□□□□ -1.87
SRP40YKR092C UBR2Q07963 1872 aa3.36□□□□□ -1.87
SRP40YKR092C RPL30P14120 105 aaKnown RBP3.35□□□□□ -1.87
SRP40YKR092C TFS1P14306 219 aa3.35□□□□□ -1.87
SRP40YKR092C COX10P21592 462 aa3.35□□□□□ -1.87
SRP40YKR092C YCR099CP25657 155 aa3.35□□□□□ -1.87
SRP40YKR092C VMA11P32842 164 aa3.35□□□□□ -1.87
SRP40YKR092C ZRT3P34240 503 aa3.35□□□□□ -1.87
SRP40YKR092C SOR1P35497 357 aaKnown RBP3.35□□□□□ -1.87
SRP40YKR092C ISC1P40015 477 aaKnown RBP3.35□□□□□ -1.87
SRP40YKR092C SMD3P43321 101 aaKnown RBP3.35□□□□□ -1.87
SRP40YKR092C GPI2P46961 280 aa3.35□□□□□ -1.87
SRP40YKR092C CYT2Q00873 224 aa3.35□□□□□ -1.87
SRP40YKR092C SPG3Q04398 127 aaPredicted RBP3.35□□□□□ -1.87
SRP40YKR092C YMR317WQ04893 1140 aa3.35□□□□□ -1.87
SRP40YKR092C PIN3Q06449 215 aa3.35□□□□□ -1.87
SRP40YKR092C RAF1Q06891 181 aa3.35□□□□□ -1.87
SRP40YKR092C SOR2Q07786 357 aa3.35□□□□□ -1.87
SRP40YKR092C FIT3Q08907 204 aa3.35□□□□□ -1.87
SRP40YKR092C YDL180WQ12301 547 aa3.35□□□□□ -1.87
SRP40YKR092C YPS3Q12303 508 aa3.35□□□□□ -1.87
SRP40YKR092C YLR422WQ06409 1932 aa3.34□□□□□ -1.87
SRP40YKR092C LAA1P39526 2014 aa3.34□□□□□ -1.87
SRP40YKR092C MRS3P10566 314 aa3.34□□□□□ -1.87
SRP40YKR092C ALK2P32789 676 aaPredicted RBP3.34□□□□□ -1.87
SRP40YKR092C SDH3P33421 198 aa3.34□□□□□ -1.87
SRP40YKR092C APS1P35181 156 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms