RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C SRB5P32585 307 aa4.15□□□□□ -1.75
CAF4YKR036C UGX2P32772 223 aa4.15□□□□□ -1.75
CAF4YKR036C PAD1P33751 242 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
CAF4YKR036C ANS1P38832 159 aa4.15□□□□□ -1.75
CAF4YKR036C YFL054CP43549 646 aa4.15□□□□□ -1.75
CAF4YKR036C LPP1Q04396 274 aa4.15□□□□□ -1.75
CAF4YKR036C LDS2Q08218 356 aa4.15□□□□□ -1.75
CAF4YKR036C SOD1P00445 154 aaKnown RBP4.14□□□□□ -1.75
CAF4YKR036C DUT1P33317 147 aa4.14□□□□□ -1.75
CAF4YKR036C YHR130CP38834 111 aa4.14□□□□□ -1.75
CAF4YKR036C YGR269WP40326 108 aa4.14□□□□□ -1.75
CAF4YKR036C LCL3P53153 274 aa4.14□□□□□ -1.75
CAF4YKR036C YNR021WP53723 404 aaKnown RBP4.14□□□□□ -1.75
CAF4YKR036C YNR040WP53736 256 aa4.14□□□□□ -1.75
CAF4YKR036C SWT21P53873 357 aaPredicted RBP4.14□□□□□ -1.75
CAF4YKR036C BET5Q03630 159 aa4.14□□□□□ -1.75
CAF4YKR036C YPR098CQ06089 161 aa4.14□□□□□ -1.75
CAF4YKR036C GCN1P33892 2672 aaKnown RBP4.14□□□□□ -1.75
CAF4YKR036C GAL7P08431 366 aa4.13□□□□□ -1.75
CAF4YKR036C SAG1P20840 650 aa4.13□□□□□ -1.75
CAF4YKR036C ERV1P27882 189 aa4.13□□□□□ -1.75
CAF4YKR036C YUH1P35127 236 aa4.13□□□□□ -1.75
CAF4YKR036C YOR062CP36025 268 aa4.13□□□□□ -1.75
CAF4YKR036C ECM14P38836 430 aa4.13□□□□□ -1.75
CAF4YKR036C YAR068WP39564 161 aa4.13□□□□□ -1.75
CAF4YKR036C YFL065CP43539 102 aa4.13□□□□□ -1.75
CAF4YKR036C MIC27P50945 234 aa4.13□□□□□ -1.75
CAF4YKR036C VPS71Q03433 280 aa4.13□□□□□ -1.75
CAF4YKR036C YPR203WQ08994 102 aa4.13□□□□□ -1.75
CAF4YKR036C SWT1Q12104 458 aa4.13□□□□□ -1.75
CAF4YKR036C ATG40Q99325 256 aa4.13□□□□□ -1.75
CAF4YKR036C CYT1P07143 309 aa4.13□□□□□ -1.75
CAF4YKR036C HEM13P11353 328 aaKnown RBP4.13□□□□□ -1.75
CAF4YKR036C STE18P18852 110 aa4.13□□□□□ -1.75
CAF4YKR036C QCR9P22289 66 aa4.13□□□□□ -1.75
CAF4YKR036C YBL059WP34224 193 aa4.13□□□□□ -1.75
CAF4YKR036C SOL3P38858 249 aa4.13□□□□□ -1.75
CAF4YKR036C BRR6P53062 197 aa4.13□□□□□ -1.75
CAF4YKR036C CPD1P53314 239 aa4.13□□□□□ -1.75
CAF4YKR036C YML079WQ03629 201 aa4.13□□□□□ -1.75
CAF4YKR036C MRPL1Q04599 285 aa4.13□□□□□ -1.75
CAF4YKR036C USV1Q12132 391 aa4.13□□□□□ -1.75
CAF4YKR036C SMT3Q12306 101 aaKnown RBP4.13□□□□□ -1.75
CAF4YKR036C MRS1P07266 363 aa4.12□□□□□ -1.75
CAF4YKR036C RPL12AP0CX53 165 aaKnown RBP4.12□□□□□ -1.75
CAF4YKR036C RPL12BP0CX54 165 aa4.12□□□□□ -1.75
CAF4YKR036C YCR023CP25351 611 aa4.12□□□□□ -1.75
CAF4YKR036C COX15P40086 486 aa4.12□□□□□ -1.75
CAF4YKR036C CYB5P40312 120 aa4.12□□□□□ -1.75
CAF4YKR036C YIL163CP40448 117 aa4.12□□□□□ -1.75
CAF4YKR036C BRP1P53194 125 aa4.12□□□□□ -1.75
CAF4YKR036C YNR064CP53750 290 aa4.12□□□□□ -1.75
CAF4YKR036C POC4Q12245 148 aaPredicted RBP4.12□□□□□ -1.75
CAF4YKR036C PRP46Q12417 451 aaPredicted RBP4.12□□□□□ -1.75
CAF4YKR036C YLR111WQ12528 110 aa4.12□□□□□ -1.75
CAF4YKR036C FLO9P39712 1322 aa4.12□□□□□ -1.75
CAF4YKR036C YLL053CP0CD98 152 aa4.11□□□□□ -1.75
CAF4YKR036C NPR1P22211 790 aa4.11□□□□□ -1.75
CAF4YKR036C MOH1P38191 138 aa4.11□□□□□ -1.75
CAF4YKR036C YBR090CP38253 122 aa4.11□□□□□ -1.75
CAF4YKR036C SHO1P40073 367 aa4.11□□□□□ -1.75
CAF4YKR036C YIL086CP40503 102 aa4.11□□□□□ -1.75
CAF4YKR036C DFG10P40526 253 aa4.11□□□□□ -1.75
CAF4YKR036C BNA2P47125 453 aa4.11□□□□□ -1.75
CAF4YKR036C MPP6P53725 186 aaPredicted RBP4.11□□□□□ -1.75
CAF4YKR036C ERG13P54839 491 aaKnown RBP4.11□□□□□ -1.75
CAF4YKR036C PET191Q02772 108 aa4.11□□□□□ -1.75
CAF4YKR036C YPL039WQ03080 316 aa4.11□□□□□ -1.75
CAF4YKR036C YMR007WQ03675 126 aa4.11□□□□□ -1.75
CAF4YKR036C YLR296WQ05898 108 aa4.11□□□□□ -1.75
CAF4YKR036C YBR255C-AQ3E776 120 aa4.11□□□□□ -1.75
CAF4YKR036C YLR365WQ7LIF2 110 aa4.11□□□□□ -1.75
CAF4YKR036C CUP2P15315 225 aa4.11□□□□□ -1.75
CAF4YKR036C FCY2P17064 533 aa4.11□□□□□ -1.75
CAF4YKR036C QRI5P32344 111 aa4.11□□□□□ -1.75
CAF4YKR036C CMC1P36064 111 aa4.11□□□□□ -1.75
CAF4YKR036C FRM2P37261 193 aa4.11□□□□□ -1.75
CAF4YKR036C DOG2P38773 246 aa4.11□□□□□ -1.75
CAF4YKR036C YNL200CP40165 246 aaKnown RBP4.11□□□□□ -1.75
CAF4YKR036C YJL213WP40896 331 aa4.11□□□□□ -1.75
CAF4YKR036C YGL118CP53132 145 aa4.11□□□□□ -1.75
CAF4YKR036C FHN1P53279 174 aa4.11□□□□□ -1.75
CAF4YKR036C RPL20AP0CX23 172 aaKnown RBP4.1□□□□□ -1.75
CAF4YKR036C RPL20BP0CX24 172 aaPredicted RBP4.1□□□□□ -1.75
CAF4YKR036C RPL43AP0CX25 92 aaKnown RBP4.1□□□□□ -1.75
CAF4YKR036C RPL43BP0CX26 92 aa4.1□□□□□ -1.75
CAF4YKR036C RPB8P20436 146 aa4.1□□□□□ -1.75
CAF4YKR036C MCH2P36032 473 aa4.1□□□□□ -1.75
CAF4YKR036C ATX1P38636 73 aa4.1□□□□□ -1.75
CAF4YKR036C YCH1P42937 148 aa4.1□□□□□ -1.75
CAF4YKR036C OST2P46964 130 aa4.1□□□□□ -1.75
CAF4YKR036C DPP1Q05521 289 aa4.1□□□□□ -1.75
CAF4YKR036C MCH4Q08268 501 aa4.1□□□□□ -1.75
CAF4YKR036C YPR108W-AQ3E7B3 70 aa4.1□□□□□ -1.75
CAF4YKR036C HUG1Q6Q5K6 68 aa4.1□□□□□ -1.75
CAF4YKR036C YPL229WQ99395 206 aa4.1□□□□□ -1.75
CAF4YKR036C RPL35AP0CX84 120 aaKnown RBP4.09□□□□□ -1.75
CAF4YKR036C RPL35BP0CX85 120 aaKnown RBP4.09□□□□□ -1.75
CAF4YKR036C HMRA1P0CY11 126 aa4.09□□□□□ -1.75
CAF4YKR036C TDA4P47153 279 aa4.09□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms