RNA–Protein interactions for RNA: YKL044W

YKL044W, Transcript of Protein of unknown function, yeast

Gene YKL044W, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL044W	YKL044W	CPR5	P35176	225 aa		0.24	□□□□□ -2.37
YKL044W	YKL044W	SHG1	P38337	142 aa		0.24	□□□□□ -2.37
YKL044W	YKL044W	YGR269W	P40326	108 aa		0.24	□□□□□ -2.37
YKL044W	YKL044W	GPI17	Q04080	534 aa		0.24	□□□□□ -2.37
YKL044W	YKL044W	APS3	P47064	194 aa		0.23	□□□□□ -2.37
YKL044W	YKL044W	PAC10	P48363	199 aa		0.23	□□□□□ -2.37
YKL044W	YKL044W	GEP7	P53171	287 aa		0.23	□□□□□ -2.37
YKL044W	YKL044W	CWC21	Q03375	135 aa	Known RBP	0.23	□□□□□ -2.37
YKL044W	YKL044W	VAM10	Q08474	114 aa		0.23	□□□□□ -2.37
YKL044W	YKL044W	RPS25B	P0C0T4	108 aa	Known RBP	0.22	□□□□□ -2.37
YKL044W	YKL044W	YEL073C	P39974	107 aa		0.22	□□□□□ -2.37
YKL044W	YKL044W	YNL200C	P40165	246 aa	Known RBP	0.22	□□□□□ -2.37
YKL044W	YKL044W	RPS25A	Q3E792	108 aa	Predicted RBP	0.22	□□□□□ -2.37
YKL044W	YKL044W	TAF2	P23255	1407 aa		0.21	□□□□□ -2.38
YKL044W	YKL044W	TRM3	Q07527	1436 aa		0.21	□□□□□ -2.38
YKL044W	YKL044W	JIP3	O13555	125 aa		0.21	□□□□□ -2.38
YKL044W	YKL044W	TTI2	P47168	421 aa		0.21	□□□□□ -2.38
YKL044W	YKL044W	HPT1	Q04178	221 aa	Known RBP	0.21	□□□□□ -2.38
YKL044W	YKL044W	NVJ1	P38881	321 aa		0.2	□□□□□ -2.38
YKL044W	YKL044W	GLR1	P41921	483 aa	Known RBP	0.2	□□□□□ -2.38
YKL044W	YKL044W	NQM1	P53228	333 aa	Predicted RBP	0.2	□□□□□ -2.38
YKL044W	YKL044W	YNL122C	P53921	115 aa	Predicted RBP	0.2	□□□□□ -2.38
YKL044W	YKL044W	YOR072W	Q08486	104 aa		0.2	□□□□□ -2.38
YKL044W	YKL044W	SPS2	P08459	502 aa		0.19	□□□□□ -2.38
YKL044W	YKL044W	HOP2	P53187	214 aa		0.19	□□□□□ -2.38
YKL044W	YKL044W	SNO1	Q03144	224 aa		0.19	□□□□□ -2.38
YKL044W	YKL044W	YET3	Q07451	203 aa		0.19	□□□□□ -2.38
YKL044W	YKL044W	ROM2	P51862	1356 aa	Known RBP	0.19	□□□□□ -2.38
YKL044W	YKL044W	YKR041W	P36134	250 aa		0.18	□□□□□ -2.38
YKL044W	YKL044W	YBR027C	P38220	110 aa		0.18	□□□□□ -2.38
YKL044W	YKL044W	XPT1	P47165	209 aa		0.18	□□□□□ -2.38
YKL044W	YKL044W	MGR2	Q02889	113 aa		0.18	□□□□□ -2.38
YKL044W	YKL044W	UIP4	Q08926	304 aa		0.18	□□□□□ -2.38
YKL044W	YKL044W	NUF2	P33895	451 aa		0.17	□□□□□ -2.38
YKL044W	YKL044W	YEL028W	P39989	153 aa		0.17	□□□□□ -2.38
YKL044W	YKL044W	SOL1	P50278	321 aa		0.17	□□□□□ -2.38
YKL044W	YKL044W	JAC1	P53193	184 aa		0.17	□□□□□ -2.38
YKL044W	YKL044W	LIP1	Q03579	150 aa		0.17	□□□□□ -2.38
YKL044W	YKL044W	SYM1	Q06563	197 aa		0.17	□□□□□ -2.38
YKL044W	YKL044W	RPS22A	P0C0W1	130 aa	Known RBP	0.16	□□□□□ -2.38
YKL044W	YKL044W	CCC1	P47818	322 aa		0.16	□□□□□ -2.38
YKL044W	YKL044W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.16	□□□□□ -2.38
YKL044W	YKL044W	HAP2	P06774	265 aa		0.15	□□□□□ -2.39
YKL044W	YKL044W	SPT14	P32363	452 aa		0.15	□□□□□ -2.39
YKL044W	YKL044W	PTC1	P35182	281 aa		0.15	□□□□□ -2.39
YKL044W	YKL044W	CSH1	P38287	376 aa		0.15	□□□□□ -2.39
YKL044W	YKL044W	PEX11	Q12462	236 aa		0.15	□□□□□ -2.39
YKL044W	YKL044W	APA2	P22108	325 aa		0.14	□□□□□ -2.39
YKL044W	YKL044W	YEL014C	P39999	101 aa		0.14	□□□□□ -2.39
YKL044W	YKL044W	YMR141C	P40211	102 aa		0.14	□□□□□ -2.39
YKL044W	YKL044W	RPL43A	P0CX25	92 aa	Known RBP	0.13	□□□□□ -2.39
YKL044W	YKL044W	RPL43B	P0CX26	92 aa		0.13	□□□□□ -2.39
YKL044W	YKL044W	INO4	P13902	151 aa		0.13	□□□□□ -2.39
YKL044W	YKL044W	GLC8	P41818	229 aa		0.13	□□□□□ -2.39
YKL044W	YKL044W	PLP1	Q04004	230 aa		0.13	□□□□□ -2.39
YKL044W	YKL044W	ATG10	Q07879	167 aa		0.13	□□□□□ -2.39
YKL044W	YKL044W	CDC39	P25655	2108 aa	Known RBP	0.13	□□□□□ -2.39
YKL044W	YKL044W	ECM31	P38122	312 aa		0.12	□□□□□ -2.39
YKL044W	YKL044W	YDL241W	Q07738	123 aa		0.12	□□□□□ -2.39
YKL044W	YKL044W	YLR307C-A	Q3E825	87 aa		0.12	□□□□□ -2.39
YKL044W	YKL044W	HYP2	P23301	157 aa	Known RBP	0.11	□□□□□ -2.39
YKL044W	YKL044W	TRR1	P29509	319 aa	Known RBP	0.11	□□□□□ -2.39
YKL044W	YKL044W	HSP150	P32478	413 aa		0.11	□□□□□ -2.39
YKL044W	YKL044W	UBC6	P33296	250 aa	Predicted RBP	0.11	□□□□□ -2.39
YKL044W	YKL044W	CMC4	Q3E7A9	73 aa		0.11	□□□□□ -2.39
YKL044W	YKL044W	ADE6	P38972	1358 aa	Known RBP	0.1	□□□□□ -2.39
YKL044W	YKL044W	SRP102	P36057	244 aa	Predicted RBP	0.1	□□□□□ -2.39
YKL044W	YKL044W	ATP7	P30902	174 aa		0.09	□□□□□ -2.4
YKL044W	YKL044W	YPT31	P38555	223 aa	Known RBP	0.09	□□□□□ -2.4
YKL044W	YKL044W	THI74	Q04083	370 aa		0.09	□□□□□ -2.4
YKL044W	YKL044W	YPR114W	Q06107	315 aa		0.09	□□□□□ -2.4
YKL044W	YKL044W	ATG8	P38182	117 aa	RIP-Chip data	0.08	□□□□□ -2.4	not detected
YKL044W	YKL044W	YNR064C	P53750	290 aa		0.08	□□□□□ -2.4
YKL044W	YKL044W	YLR157W-E	P0CF00	54 aa		0.07	□□□□□ -2.4
YKL044W	YKL044W	SPA2	P23201	1466 aa	Known RBP	0.06	□□□□□ -2.4
YKL044W	YKL044W	SEC72	P39742	193 aa	Known RBP	0.06	□□□□□ -2.4
YKL044W	YKL044W	NMA1	Q06178	401 aa	Known RBP	0.06	□□□□□ -2.4
YKL044W	YKL044W	YLR050C	Q12155	161 aa	Known RBP	0.06	□□□□□ -2.4
YKL044W	YKL044W	HSL1	P34244	1518 aa		0.06	□□□□□ -2.4
YKL044W	YKL044W	IPT1	P38954	527 aa		0.05	□□□□□ -2.4
YKL044W	YKL044W	YJL009W	P47078	108 aa		0.05	□□□□□ -2.4
YKL044W	YKL044W	SEN15	Q04675	128 aa		0.05	□□□□□ -2.4
YKL044W	YKL044W	CMD1	P06787	147 aa	Known RBP	0.04	□□□□□ -2.4
YKL044W	YKL044W	YGL041W-A	P0C5N3	154 aa		0.04	□□□□□ -2.4
YKL044W	YKL044W	YHR140W	P38842	239 aa		0.04	□□□□□ -2.4
YKL044W	YKL044W	GRE1	Q08969	168 aa		0.04	□□□□□ -2.4
YKL044W	YKL044W	RPL33A	P05744	107 aa	Known RBP	0.03	□□□□□ -2.4
YKL044W	YKL044W	RAD51	P25454	400 aa		0.03	□□□□□ -2.4
YKL044W	YKL044W	HTD2	P38790	280 aa	Known RBP	0.03	□□□□□ -2.4
YKL044W	YKL044W	YNL140C	P53910	189 aa		0.03	□□□□□ -2.4
YKL044W	YKL044W	TMA20	P89886	181 aa	Predicted RBP	0.03	□□□□□ -2.4
YKL044W	YKL044W	FMN1	Q03778	218 aa		0.03	□□□□□ -2.4
YKL044W	YKL044W	YDR102C	Q03864	110 aa		0.03	□□□□□ -2.4
YKL044W	YKL044W	YLR046C	Q12253	270 aa		0.03	□□□□□ -2.4
YKL044W	YKL044W	SRP14	P38985	146 aa		0.02	□□□□□ -2.41
YKL044W	YKL044W	IRC21	Q04772	201 aa		0.02	□□□□□ -2.41
YKL044W	YKL044W	RIB3	Q99258	208 aa		0.02	□□□□□ -2.41
YKL044W	YKL044W	LAA1	P39526	2014 aa		0.01	□□□□□ -2.41
YKL044W	YKL044W	ATP5	P09457	212 aa		0.01	□□□□□ -2.41
YKL044W	YKL044W	YIP3	P53633	176 aa		0.01	□□□□□ -2.41

Retrieved 100 of 5,963 RNA–protein pairs in 109.7 ms