RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP9	YJL010C	RIM9	Q04734	239 aa		0.27	□□□□□ -2.37
NOP9	YJL010C	ELP6	Q04868	273 aa		0.27	□□□□□ -2.37
NOP9	YJL010C	FCY1	Q12178	158 aa		0.27	□□□□□ -2.37
NOP9	YJL010C	DUR1,2	P32528	1835 aa	Known RBP	0.27	□□□□□ -2.37
NOP9	YJL010C	TAF2	P23255	1407 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	YGL041W-A	P0C5N3	154 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	MAK31	P23059	88 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	ETR1	P38071	380 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	YGR269W	P40326	108 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	TTI2	P47168	421 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	YNL140C	P53910	189 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	LIP1	Q03579	150 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	ATG38	Q05789	226 aa	Known RBP	0.26	□□□□□ -2.37
NOP9	YJL010C	GRE1	Q08969	168 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	YLR050C	Q12155	161 aa	Known RBP	0.26	□□□□□ -2.37
NOP9	YJL010C	YLR046C	Q12253	270 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	JIP3	O13555	125 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	RPS25B	P0C0T4	108 aa	Known RBP	0.26	□□□□□ -2.37
NOP9	YJL010C	SRP102	P36057	244 aa	Predicted RBP	0.26	□□□□□ -2.37
NOP9	YJL010C	VPS51	P36116	164 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	EGD2	P38879	174 aa	Known RBP	0.26	□□□□□ -2.37
NOP9	YJL010C	YEL073C	P39974	107 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	YEL028W	P39989	153 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	MPM1	P40364	252 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	NQM1	P53228	333 aa	Predicted RBP	0.26	□□□□□ -2.37
NOP9	YJL010C	SYM1	Q06563	197 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	YPR203W	Q08994	102 aa		0.26	□□□□□ -2.37
NOP9	YJL010C	PST2	Q12335	198 aa	Known RBP	0.26	□□□□□ -2.37
NOP9	YJL010C	RPS25A	Q3E792	108 aa	Predicted RBP	0.26	□□□□□ -2.37
NOP9	YJL010C	ADE6	P38972	1358 aa	Known RBP	0.26	□□□□□ -2.37
NOP9	YJL010C	UGX2	P32772	223 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	YKR041W	P36134	250 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	YKR070W	P36151	352 aa	Known RBP	0.25	□□□□□ -2.37
NOP9	YJL010C	ECM31	P38122	312 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	APS3	P47064	194 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	YIP3	P53633	176 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	THI74	Q04083	370 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	AVO2	Q04749	426 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	YOR072W	Q08486	104 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	YOR381W-A	Q3E804	55 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	PRP8	P33334	2413 aa	Known RBP	0.25	□□□□□ -2.37
NOP9	YJL010C	FAS1	P07149	2051 aa	Known RBP	0.25	□□□□□ -2.37
NOP9	YJL010C	YLR422W	Q06409	1932 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	KIN28	P06242	306 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	SPS2	P08459	502 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	HYP2	P23301	157 aa	Known RBP	0.25	□□□□□ -2.37
NOP9	YJL010C	RAD51	P25454	400 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	SHB17	P36136	271 aa	Known RBP	0.25	□□□□□ -2.37
NOP9	YJL010C	FYV4	P38783	130 aa	Predicted RBP	0.25	□□□□□ -2.37
NOP9	YJL010C	YGL193C	P53097	103 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	YNL122C	P53921	115 aa	Predicted RBP	0.25	□□□□□ -2.37
NOP9	YJL010C	YDC1	Q02896	317 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	TMA23	Q03525	211 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	KEI1	Q06346	221 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	LCL2	Q08045	131 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	CCW12	Q12127	133 aa		0.25	□□□□□ -2.37
NOP9	YJL010C	CPR5	P35176	225 aa		0.24	□□□□□ -2.37
NOP9	YJL010C	YEL014C	P39999	101 aa		0.24	□□□□□ -2.37
NOP9	YJL010C	PAC10	P48363	199 aa		0.24	□□□□□ -2.37
NOP9	YJL010C	SOL1	P50278	321 aa		0.24	□□□□□ -2.37
NOP9	YJL010C	YGL230C	P53074	147 aa		0.24	□□□□□ -2.37
NOP9	YJL010C	YNR064C	P53750	290 aa		0.24	□□□□□ -2.37
NOP9	YJL010C	CMC2	Q3E7A4	109 aa		0.24	□□□□□ -2.37
NOP9	YJL010C	YHR213W-B	Q8TGK1	99 aa		0.24	□□□□□ -2.37
NOP9	YJL010C	HSL1	P34244	1518 aa		0.24	□□□□□ -2.37
NOP9	YJL010C	QCR2	P07257	368 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	ATP5	P09457	212 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	RPS28B	P0C0X0	67 aa	Known RBP	0.23	□□□□□ -2.37
NOP9	YJL010C	YCR001W	P25347	104 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	CSH1	P38287	376 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	HTD2	P38790	280 aa	Known RBP	0.23	□□□□□ -2.37
NOP9	YJL010C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.23	□□□□□ -2.37
NOP9	YJL010C	HAP2	P06774	265 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	PBI2	P0CT04	75 aa	Known RBP	0.23	□□□□□ -2.37
NOP9	YJL010C	PEX34	P25584	144 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	BUB2	P26448	306 aa	Predicted RBP	0.23	□□□□□ -2.37
NOP9	YJL010C	SPT14	P32363	452 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	SRL3	P36167	246 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	FES1	P38260	290 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	YJL009W	P47078	108 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	YGL101W	P53144	215 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	LSM3	P57743	89 aa	Known RBP	0.23	□□□□□ -2.37
NOP9	YJL010C	ATP19	P81451	68 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	FMN1	Q03778	218 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	ATG10	Q07879	167 aa		0.23	□□□□□ -2.37
NOP9	YJL010C	CHD1	P32657	1468 aa		0.22	□□□□□ -2.37
NOP9	YJL010C	HSP150	P32478	413 aa		0.22	□□□□□ -2.37
NOP9	YJL010C	CCC1	P47818	322 aa		0.22	□□□□□ -2.37
NOP9	YJL010C	MGR2	Q02889	113 aa		0.22	□□□□□ -2.37
NOP9	YJL010C	GIM5	Q04493	163 aa		0.22	□□□□□ -2.37
NOP9	YJL010C	RRT7	Q07829	113 aa		0.22	□□□□□ -2.37
NOP9	YJL010C	YLR053C	Q12026	108 aa		0.22	□□□□□ -2.37
NOP9	YJL010C	RPS22A	P0C0W1	130 aa	Known RBP	0.21	□□□□□ -2.38
NOP9	YJL010C	RPL30	P14120	105 aa	Known RBP	0.21	□□□□□ -2.38
NOP9	YJL010C	YBR027C	P38220	110 aa		0.21	□□□□□ -2.38
NOP9	YJL010C	YNL200C	P40165	246 aa	Known RBP	0.21	□□□□□ -2.38
NOP9	YJL010C	RCF2	P53721	224 aa		0.21	□□□□□ -2.38
NOP9	YJL010C	SED1	Q01589	338 aa		0.21	□□□□□ -2.38
NOP9	YJL010C	GRX3	Q03835	250 aa		0.21	□□□□□ -2.38
NOP9	YJL010C	YPR114W	Q06107	315 aa		0.21	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms