RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C ERV29P53337 310 aa2.75□□□□□ -1.97
YIR040CYIR040C RNH201P53942 307 aa2.75□□□□□ -1.97
YIR040CYIR040C YPL039WQ03080 316 aa2.75□□□□□ -1.97
YIR040CYIR040C BET5Q03630 159 aa2.75□□□□□ -1.97
YIR040CYIR040C AVO2Q04749 426 aa2.75□□□□□ -1.97
YIR040CYIR040C TSC3Q3E790 80 aa2.75□□□□□ -1.97
YIR040CYIR040C RRP5Q05022 1729 aaKnown RBP2.75□□□□□ -1.97
YIR040CYIR040C TY1B-HO13535 1793 aa2.74□□□□□ -1.97
YIR040CYIR040C TY1B-DR5P0C2I2 1755 aa2.74□□□□□ -1.97
YIR040CYIR040C TY1B-DR6P0C2I3 1755 aa2.74□□□□□ -1.97
YIR040CYIR040C TY1B-LR2P0C2I5 1755 aa2.74□□□□□ -1.97
YIR040CYIR040C TY1B-LR3P0C2I6 1755 aaKnown RBP2.74□□□□□ -1.97
YIR040CYIR040C TY1B-PR1P0C2I9 1755 aaKnown RBP2.74□□□□□ -1.97
YIR040CYIR040C TY1B-PR3P0C2J1 1755 aaKnown RBP2.74□□□□□ -1.97
YIR040CYIR040C TY1B-JR1P47098 1755 aa2.74□□□□□ -1.97
YIR040CYIR040C TY1B-ML2Q03434 1755 aaKnown RBP2.74□□□□□ -1.97
YIR040CYIR040C TY1B-ER1Q03612 1755 aa2.74□□□□□ -1.97
YIR040CYIR040C TY1B-ML1Q04711 1755 aaKnown RBP2.74□□□□□ -1.97
YIR040CYIR040C TY1B-GR2Q12269 1755 aa2.74□□□□□ -1.97
YIR040CYIR040C TY1B-OLQ12273 1755 aa2.74□□□□□ -1.97
YIR040CYIR040C TY1B-PLQ12414 1755 aaKnown RBP2.74□□□□□ -1.97
YIR040CYIR040C VTH1P40438 1549 aa2.74□□□□□ -1.97
YIR040CYIR040C VTH2P40890 1549 aa2.74□□□□□ -1.97
YIR040CYIR040C RPO21P04050 1733 aaKnown RBP2.74□□□□□ -1.97
YIR040CYIR040C YOL162WP0CF19 215 aa2.74□□□□□ -1.97
YIR040CYIR040C KRE1P17260 313 aa2.74□□□□□ -1.97
YIR040CYIR040C CKS1P20486 150 aaKnown RBP2.74□□□□□ -1.97
YIR040CYIR040C YCR085WP25650 117 aa2.74□□□□□ -1.97
YIR040CYIR040C YCR099CP25657 155 aa2.74□□□□□ -1.97
YIR040CYIR040C RPA12P32529 125 aaKnown RBP2.74□□□□□ -1.97
YIR040CYIR040C CSE2P33308 149 aa2.74□□□□□ -1.97
YIR040CYIR040C APS1P35181 156 aa2.74□□□□□ -1.97
YIR040CYIR040C ARN2P38724 620 aa2.74□□□□□ -1.97
YIR040CYIR040C YHR140WP38842 239 aa2.74□□□□□ -1.97
YIR040CYIR040C EMC4P53073 190 aa2.74□□□□□ -1.97
YIR040CYIR040C LSM7P53905 115 aaKnown RBP2.74□□□□□ -1.97
YIR040CYIR040C ADD37Q03233 198 aa2.74□□□□□ -1.97
YIR040CYIR040C YML079WQ03629 201 aa2.74□□□□□ -1.97
YIR040CYIR040C CSI2Q08054 341 aa2.74□□□□□ -1.97
YIR040CYIR040C IES4Q08561 116 aa2.74□□□□□ -1.97
YIR040CYIR040C YDL180WQ12301 547 aa2.74□□□□□ -1.97
YIR040CYIR040C YOS1Q3E834 85 aa2.74□□□□□ -1.97
YIR040CYIR040C CDC25P04821 1589 aa2.74□□□□□ -1.97
YIR040CYIR040C NTE1Q04958 1679 aa2.73□□□□□ -1.97
YIR040CYIR040C RAS2P01120 322 aaKnown RBP2.73□□□□□ -1.97
YIR040CYIR040C HEM4P06174 275 aa2.73□□□□□ -1.97
YIR040CYIR040C RPS25BP0C0T4 108 aaKnown RBP2.73□□□□□ -1.97
YIR040CYIR040C YAR066WP0CX18 203 aa2.73□□□□□ -1.97
YIR040CYIR040C YHR214WP0CX19 203 aa2.73□□□□□ -1.97
YIR040CYIR040C SPT4P32914 102 aaPredicted RBP2.73□□□□□ -1.97
YIR040CYIR040C MIX23P38162 196 aa2.73□□□□□ -1.97
YIR040CYIR040C YIL169CP40442 995 aa2.73□□□□□ -1.97
YIR040CYIR040C YNL320WP42840 284 aa2.73□□□□□ -1.97
YIR040CYIR040C KEG1P43614 200 aa2.73□□□□□ -1.97
YIR040CYIR040C SPG1P50088 95 aa2.73□□□□□ -1.97
YIR040CYIR040C YNL046WP53956 172 aa2.73□□□□□ -1.97
YIR040CYIR040C BUD25P85052 153 aa2.73□□□□□ -1.97
YIR040CYIR040C SPG4Q04438 115 aa2.73□□□□□ -1.97
YIR040CYIR040C FCF1Q05498 189 aaPredicted RBP2.73□□□□□ -1.97
YIR040CYIR040C TIM18Q08749 192 aa2.73□□□□□ -1.97
YIR040CYIR040C SLM3Q12093 417 aa2.73□□□□□ -1.97
YIR040CYIR040C YDL009CQ12210 107 aa2.73□□□□□ -1.97
YIR040CYIR040C RPS25AQ3E792 108 aaPredicted RBP2.73□□□□□ -1.97
YIR040CYIR040C ENV10Q99382 181 aa2.73□□□□□ -1.97
YIR040CYIR040C CHC1P22137 1653 aaKnown RBP2.73□□□□□ -1.97
YIR040CYIR040C ESC1Q03661 1658 aaKnown RBP2.73□□□□□ -1.97
YIR040CYIR040C YAL064W-BO13512 126 aa2.72□□□□□ -1.97
YIR040CYIR040C HSP26P15992 214 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
YIR040CYIR040C GLC7P32598 312 aaKnown RBP2.72□□□□□ -1.97
YIR040CYIR040C MTR2P34232 184 aaKnown RBP2.72□□□□□ -1.97
YIR040CYIR040C TRS20P38334 175 aa2.72□□□□□ -1.97
YIR040CYIR040C YHL018WP38744 120 aaPredicted RBP2.72□□□□□ -1.97
YIR040CYIR040C GCV3P39726 170 aaPredicted RBP2.72□□□□□ -1.97
YIR040CYIR040C YER181CP40097 107 aa2.72□□□□□ -1.97
YIR040CYIR040C CCS1P40202 249 aaKnown RBP2.72□□□□□ -1.97
YIR040CYIR040C PHS1P40857 217 aa2.72□□□□□ -1.97
YIR040CYIR040C CWP2P43497 92 aa2.72□□□□□ -1.97
YIR040CYIR040C FIP1P45976 327 aa2.72□□□□□ -1.97
YIR040CYIR040C UBP8P50102 471 aa2.72□□□□□ -1.97
YIR040CYIR040C YPS5P53057 165 aa2.72□□□□□ -1.97
YIR040CYIR040C YGL088WP53151 121 aa2.72□□□□□ -1.97
YIR040CYIR040C RSM19P53733 91 aaPredicted RBP2.72□□□□□ -1.97
YIR040CYIR040C SLG1P54867 378 aa2.72□□□□□ -1.97
YIR040CYIR040C ANT1Q06497 328 aa2.72□□□□□ -1.97
YIR040CYIR040C YPL162CQ12042 273 aa2.72□□□□□ -1.97
YIR040CYIR040C KSH1Q8TGJ3 72 aa2.72□□□□□ -1.97
YIR040CYIR040C FAS2P19097 1887 aaKnown RBP2.71□□□□□ -1.98
YIR040CYIR040C TOM40P23644 387 aaKnown RBP2.71□□□□□ -1.98
YIR040CYIR040C FUN19P28003 413 aaPredicted RBP2.71□□□□□ -1.98
YIR040CYIR040C MRP17P28778 131 aa2.71□□□□□ -1.98
YIR040CYIR040C TOM6P33448 61 aa2.71□□□□□ -1.98
YIR040CYIR040C ZRT3P34240 503 aa2.71□□□□□ -1.98
YIR040CYIR040C MID2P36027 376 aa2.71□□□□□ -1.98
YIR040CYIR040C RPL14AP36105 138 aaKnown RBP2.71□□□□□ -1.98
YIR040CYIR040C PHO88P38264 188 aaPredicted RBP2.71□□□□□ -1.98
YIR040CYIR040C FLO5P38894 1075 aa2.71□□□□□ -1.98
YIR040CYIR040C ASP1P38986 381 aaPredicted RBP2.71□□□□□ -1.98
YIR040CYIR040C DFG10P40526 253 aa2.71□□□□□ -1.98
YIR040CYIR040C EAF6P47128 113 aa2.71□□□□□ -1.98
YIR040CYIR040C UBC13P52490 153 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms