RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W PGU1P47180 361 aa4.23□□□□□ -1.73
PDE1YGL248W MPC1P53157 130 aaKnown RBP4.23□□□□□ -1.73
PDE1YGL248W SWC7Q06707 132 aa4.23□□□□□ -1.73
PDE1YGL248W RAD28Q12021 506 aa4.23□□□□□ -1.73
PDE1YGL248W PST1Q12355 444 aa4.23□□□□□ -1.73
PDE1YGL248W STU1P38198 1513 aa4.22□□□□□ -1.73
PDE1YGL248W YEL009C-AA0A023PZF2 135 aa4.22□□□□□ -1.73
PDE1YGL248W SCM4P32564 187 aa4.22□□□□□ -1.73
PDE1YGL248W SAY1P53324 424 aa4.22□□□□□ -1.73
PDE1YGL248W YMR254CQ04838 102 aa4.22□□□□□ -1.73
PDE1YGL248W RPL21BQ12672 160 aaKnown RBP4.22□□□□□ -1.73
PDE1YGL248W POL1P13382 1468 aa4.22□□□□□ -1.73
PDE1YGL248W CAT8P39113 1433 aa4.21□□□□□ -1.73
PDE1YGL248W PDR11P40550 1411 aa4.21□□□□□ -1.73
PDE1YGL248W RAS2P01120 322 aaKnown RBP4.21□□□□□ -1.74
PDE1YGL248W YCR099CP25657 155 aa4.21□□□□□ -1.74
PDE1YGL248W SRB6P32570 121 aa4.21□□□□□ -1.74
PDE1YGL248W IPT1P38954 527 aa4.21□□□□□ -1.74
PDE1YGL248W CUP9P41817 306 aa4.21□□□□□ -1.74
PDE1YGL248W YFL067WP43537 175 aa4.21□□□□□ -1.74
PDE1YGL248W YJR085CP47131 105 aaKnown RBP4.21□□□□□ -1.74
PDE1YGL248W ERV14P53173 138 aa4.21□□□□□ -1.74
PDE1YGL248W CRH1P53301 507 aa4.21□□□□□ -1.74
PDE1YGL248W SMD1Q02260 146 aaPredicted RBP4.21□□□□□ -1.74
PDE1YGL248W FIT1Q04433 528 aa4.21□□□□□ -1.74
PDE1YGL248W RRT7Q07829 113 aa4.21□□□□□ -1.74
PDE1YGL248W ATX2Q12067 313 aa4.21□□□□□ -1.74
PDE1YGL248W SMT3Q12306 101 aaKnown RBP4.21□□□□□ -1.74
PDE1YGL248W RPL13AQ12690 199 aaPredicted RBP4.21□□□□□ -1.74
PDE1YGL248W ATP15P21306 62 aa4.2□□□□□ -1.74
PDE1YGL248W CLB6P32943 380 aa4.2□□□□□ -1.74
PDE1YGL248W FYV4P38783 130 aaPredicted RBP4.2□□□□□ -1.74
PDE1YGL248W YIL152WP40455 235 aa4.2□□□□□ -1.74
PDE1YGL248W TIR3P40552 269 aa4.2□□□□□ -1.74
PDE1YGL248W YPL039WQ03080 316 aa4.2□□□□□ -1.74
PDE1YGL248W FCF1Q05498 189 aaPredicted RBP4.2□□□□□ -1.74
PDE1YGL248W ANT1Q06497 328 aa4.2□□□□□ -1.74
PDE1YGL248W JID1Q12350 301 aa4.2□□□□□ -1.74
PDE1YGL248W ATG5Q12380 294 aa4.2□□□□□ -1.74
PDE1YGL248W MED11Q99278 115 aa4.2□□□□□ -1.74
PDE1YGL248W LYS2P07702 1392 aa4.19□□□□□ -1.74
PDE1YGL248W CPA1P07258 411 aaKnown RBP4.19□□□□□ -1.74
PDE1YGL248W NOP1P15646 327 aaKnown RBP4.19□□□□□ -1.74
PDE1YGL248W HOT13P36078 116 aa4.19□□□□□ -1.74
PDE1YGL248W VTC1P40046 129 aaRIP-Chip data4.19□□□□□ -1.74not detected
PDE1YGL248W NSA2P40078 261 aaKnown RBP4.19□□□□□ -1.74
PDE1YGL248W CCS1P40202 249 aaKnown RBP4.19□□□□□ -1.74
PDE1YGL248W YIR035CP40579 254 aa4.19□□□□□ -1.74
PDE1YGL248W YDR102CQ03864 110 aa4.19□□□□□ -1.74
PDE1YGL248W YMR090WQ04304 227 aaKnown RBP4.19□□□□□ -1.74
PDE1YGL248W YMR252CQ04814 134 aa4.19□□□□□ -1.74
PDE1YGL248W SYM1Q06563 197 aa4.19□□□□□ -1.74
PDE1YGL248W AYT1Q12226 474 aa4.19□□□□□ -1.74
PDE1YGL248W ESP1Q03018 1630 aa4.19□□□□□ -1.74
PDE1YGL248W YAR023CD6VPM8 179 aa4.18□□□□□ -1.74
PDE1YGL248W MSW1P04803 379 aa4.18□□□□□ -1.74
PDE1YGL248W DDR48P18899 430 aaKnown RBP4.18□□□□□ -1.74
PDE1YGL248W YCR050CP25630 102 aa4.18□□□□□ -1.74
PDE1YGL248W TMA19P35691 167 aaKnown RBP4.18□□□□□ -1.74
PDE1YGL248W YEL028WP39989 153 aa4.18□□□□□ -1.74
PDE1YGL248W YER135CP40082 130 aa4.18□□□□□ -1.74
PDE1YGL248W ATG18P43601 500 aa4.18□□□□□ -1.74
PDE1YGL248W BNS1P50084 137 aa4.18□□□□□ -1.74
PDE1YGL248W RPL21AQ02753 160 aaKnown RBP4.18□□□□□ -1.74
PDE1YGL248W MRPS8Q03799 155 aa4.18□□□□□ -1.74
PDE1YGL248W GAL83Q04739 417 aa4.18□□□□□ -1.74
PDE1YGL248W COA4Q05809 96 aa4.18□□□□□ -1.74
PDE1YGL248W GEA1P47102 1408 aaPredicted RBP4.18□□□□□ -1.74
PDE1YGL248W MYO4P32492 1471 aa4.18□□□□□ -1.74
PDE1YGL248W ADE6P38972 1358 aaKnown RBP4.17□□□□□ -1.74
PDE1YGL248W SWR1Q05471 1514 aa4.17□□□□□ -1.74
PDE1YGL248W RPL42AP0CX27 106 aaKnown RBP4.17□□□□□ -1.74
PDE1YGL248W RPL42BP0CX28 106 aaKnown RBP4.17□□□□□ -1.74
PDE1YGL248W TVP15Q03860 143 aa4.17□□□□□ -1.74
PDE1YGL248W SML1Q04964 104 aa4.17□□□□□ -1.74
PDE1YGL248W FYV12Q08559 129 aa4.17□□□□□ -1.74
PDE1YGL248W ATO3Q12359 275 aa4.17□□□□□ -1.74
PDE1YGL248W YGL010WP25338 174 aa4.16□□□□□ -1.74
PDE1YGL248W FMT1P32785 401 aa4.16□□□□□ -1.74
PDE1YGL248W PAM17P36147 197 aa4.16□□□□□ -1.74
PDE1YGL248W FLO5P38894 1075 aa4.16□□□□□ -1.74
PDE1YGL248W YND1P40009 630 aa4.16□□□□□ -1.74
PDE1YGL248W ARC15P40518 154 aaRIP-Chip data4.16□□□□□ -1.74not detected
PDE1YGL248W DSK2P48510 373 aa4.16□□□□□ -1.74
PDE1YGL248W YGL118CP53132 145 aa4.16□□□□□ -1.74
PDE1YGL248W YPR174CQ06616 221 aaPredicted RBP4.16□□□□□ -1.74
PDE1YGL248W FIT3Q08907 204 aa4.16□□□□□ -1.74
PDE1YGL248W ODC2Q99297 307 aa4.16□□□□□ -1.74
PDE1YGL248W MON2P48563 1636 aaPredicted RBP4.16□□□□□ -1.74
PDE1YGL248W NUP170P38181 1502 aa4.16□□□□□ -1.74
PDE1YGL248W TIM9O74700 87 aa4.15□□□□□ -1.75
PDE1YGL248W EMP24P32803 203 aaKnown RBP4.15□□□□□ -1.75
PDE1YGL248W SDH3P33421 198 aa4.15□□□□□ -1.75
PDE1YGL248W UMP1P38293 148 aa4.15□□□□□ -1.75
PDE1YGL248W YIL054WP40524 105 aa4.15□□□□□ -1.75
PDE1YGL248W YDR115WQ04598 105 aa4.15□□□□□ -1.75
PDE1YGL248W YPL247CQ12523 523 aa4.15□□□□□ -1.75
PDE1YGL248W YPK9Q12697 1472 aa4.15□□□□□ -1.75
PDE1YGL248W SMC4Q12267 1418 aa4.14□□□□□ -1.75
PDE1YGL248W COX5BP00425 151 aa4.14□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 159 ms