RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W ANT1Q06497 328 aa3.25□□□□□ -1.89
UBP6YFR010W ATG10Q07879 167 aa3.25□□□□□ -1.89
UBP6YFR010W UIP4Q08926 304 aa3.25□□□□□ -1.89
UBP6YFR010W YPL264CQ08980 353 aa3.25□□□□□ -1.89
UBP6YFR010W YRF1-3P0CX14 1859 aa3.25□□□□□ -1.89
UBP6YFR010W YRF1-7P0CX15 1859 aa3.25□□□□□ -1.89
UBP6YFR010W YRF1-6P53819 1859 aa3.25□□□□□ -1.89
UBP6YFR010W DDR48P18899 430 aaKnown RBP3.24□□□□□ -1.89
UBP6YFR010W MRPL44P19956 98 aa3.24□□□□□ -1.89
UBP6YFR010W RPB5P20434 215 aa3.24□□□□□ -1.89
UBP6YFR010W SRB6P32570 121 aa3.24□□□□□ -1.89
UBP6YFR010W BNS1P50084 137 aa3.24□□□□□ -1.89
UBP6YFR010W SMD1Q02260 146 aaPredicted RBP3.24□□□□□ -1.89
UBP6YFR010W YLR281CQ05863 155 aa3.24□□□□□ -1.89
UBP6YFR010W YPR063CQ12160 140 aa3.24□□□□□ -1.89
UBP6YFR010W RPL13AQ12690 199 aaPredicted RBP3.24□□□□□ -1.89
UBP6YFR010W CAT8P39113 1433 aa3.24□□□□□ -1.89
UBP6YFR010W YSP2Q06681 1438 aa3.24□□□□□ -1.89
UBP6YFR010W RAD6P06104 172 aa3.24□□□□□ -1.89
UBP6YFR010W RPL42AP0CX27 106 aaKnown RBP3.24□□□□□ -1.89
UBP6YFR010W RPL42BP0CX28 106 aaKnown RBP3.24□□□□□ -1.89
UBP6YFR010W YCR050CP25630 102 aa3.24□□□□□ -1.89
UBP6YFR010W YER134CP40081 178 aa3.24□□□□□ -1.89
UBP6YFR010W YDR102CQ03864 110 aa3.24□□□□□ -1.89
UBP6YFR010W YPR174CQ06616 221 aaPredicted RBP3.24□□□□□ -1.89
UBP6YFR010W ATG5Q12380 294 aa3.24□□□□□ -1.89
UBP6YFR010W MED11Q99278 115 aa3.24□□□□□ -1.89
UBP6YFR010W LYS2P07702 1392 aa3.23□□□□□ -1.89
UBP6YFR010W ADE6P38972 1358 aaKnown RBP3.23□□□□□ -1.89
UBP6YFR010W MSW1P04803 379 aa3.23□□□□□ -1.89
UBP6YFR010W ADH3P07246 375 aaKnown RBP3.23□□□□□ -1.89
UBP6YFR010W NOP1P15646 327 aaKnown RBP3.23□□□□□ -1.89
UBP6YFR010W YAR068WP39564 161 aa3.23□□□□□ -1.89
UBP6YFR010W CCS1P40202 249 aaKnown RBP3.23□□□□□ -1.89
UBP6YFR010W RPL13BP40212 199 aaKnown RBP3.23□□□□□ -1.89
UBP6YFR010W YIL152WP40455 235 aa3.23□□□□□ -1.89
UBP6YFR010W ATG18P43601 500 aa3.23□□□□□ -1.89
UBP6YFR010W ERV14P53173 138 aa3.23□□□□□ -1.89
UBP6YFR010W GAL83Q04739 417 aa3.23□□□□□ -1.89
UBP6YFR010W SML1Q04964 104 aa3.23□□□□□ -1.89
UBP6YFR010W SYM1Q06563 197 aa3.23□□□□□ -1.89
UBP6YFR010W SWC7Q06707 132 aa3.23□□□□□ -1.89
UBP6YFR010W SMT3Q12306 101 aaKnown RBP3.23□□□□□ -1.89
UBP6YFR010W YOR376W-AQ3E805 51 aa3.23□□□□□ -1.89
UBP6YFR010W NAG1Q8TGN9 163 aa3.23□□□□□ -1.89
UBP6YFR010W TY1B-BRQ12193 1756 aa3.22□□□□□ -1.89
UBP6YFR010W TY1B-DR1Q03855 1755 aa3.22□□□□□ -1.89
UBP6YFR010W TY1B-DR3Q99231 1755 aa3.22□□□□□ -1.89
UBP6YFR010W YAR023CD6VPM8 179 aa3.22□□□□□ -1.89
UBP6YFR010W EMP24P32803 203 aaKnown RBP3.22□□□□□ -1.89
UBP6YFR010W TMA19P35691 167 aaKnown RBP3.22□□□□□ -1.89
UBP6YFR010W PAM17P36147 197 aa3.22□□□□□ -1.89
UBP6YFR010W IPT1P38954 527 aa3.22□□□□□ -1.89
UBP6YFR010W YER135CP40082 130 aa3.22□□□□□ -1.89
UBP6YFR010W CRH1P53301 507 aa3.22□□□□□ -1.89
UBP6YFR010W AYT1Q12226 474 aa3.22□□□□□ -1.89
UBP6YFR010W CPA1P07258 411 aaKnown RBP3.21□□□□□ -1.9
UBP6YFR010W YCR099CP25657 155 aa3.21□□□□□ -1.9
UBP6YFR010W CLB6P32943 380 aa3.21□□□□□ -1.9
UBP6YFR010W YEL028WP39989 153 aa3.21□□□□□ -1.9
UBP6YFR010W YND1P40009 630 aa3.21□□□□□ -1.9
UBP6YFR010W NSA2P40078 261 aaKnown RBP3.21□□□□□ -1.9
UBP6YFR010W SPG1P50088 95 aa3.21□□□□□ -1.9
UBP6YFR010W YMR090WQ04304 227 aaKnown RBP3.21□□□□□ -1.9
UBP6YFR010W FYV12Q08559 129 aa3.21□□□□□ -1.9
UBP6YFR010W PST1Q12355 444 aa3.21□□□□□ -1.9
UBP6YFR010W YPL247CQ12523 523 aa3.21□□□□□ -1.9
UBP6YFR010W RPL21BQ12672 160 aaKnown RBP3.21□□□□□ -1.9
UBP6YFR010W RAS2P01120 322 aaKnown RBP3.2□□□□□ -1.9
UBP6YFR010W HMRA1P0CY11 126 aa3.2□□□□□ -1.9
UBP6YFR010W YPL067CQ02754 198 aa3.2□□□□□ -1.9
UBP6YFR010W YMR244WQ04018 355 aa3.2□□□□□ -1.9
UBP6YFR010W FIT1Q04433 528 aa3.2□□□□□ -1.9
UBP6YFR010W GPI11Q06636 219 aa3.2□□□□□ -1.9
UBP6YFR010W YDR029WQ12111 104 aa3.2□□□□□ -1.9
UBP6YFR010W GEA1P47102 1408 aaPredicted RBP3.2□□□□□ -1.9
UBP6YFR010W PDR10P51533 1564 aa3.2□□□□□ -1.9
UBP6YFR010W TY1B-DR4Q07793 1604 aa3.2□□□□□ -1.9
UBP6YFR010W YGL010WP25338 174 aa3.19□□□□□ -1.9
UBP6YFR010W FMT1P32785 401 aa3.19□□□□□ -1.9
UBP6YFR010W YAL064WP39711 94 aa3.19□□□□□ -1.9
UBP6YFR010W HPA3P39979 161 aa3.19□□□□□ -1.9
UBP6YFR010W TIR3P40552 269 aa3.19□□□□□ -1.9
UBP6YFR010W RPR2P40571 144 aa3.19□□□□□ -1.9
UBP6YFR010W YIR035CP40579 254 aa3.19□□□□□ -1.9
UBP6YFR010W YFL067WP43537 175 aa3.19□□□□□ -1.9
UBP6YFR010W FIT3Q08907 204 aa3.19□□□□□ -1.9
UBP6YFR010W ODC2Q99297 307 aa3.19□□□□□ -1.9
UBP6YFR010W TIM9O74700 87 aa3.19□□□□□ -1.9
UBP6YFR010W SPO73P40031 143 aa3.19□□□□□ -1.9
UBP6YFR010W ARC15P40518 154 aaRIP-Chip data3.19□□□□□ -1.9not detected
UBP6YFR010W YNR064CP53750 290 aa3.19□□□□□ -1.9
UBP6YFR010W RPL21AQ02753 160 aaKnown RBP3.19□□□□□ -1.9
UBP6YFR010W SHH3Q04487 196 aa3.19□□□□□ -1.9
UBP6YFR010W RRT7Q07829 113 aa3.19□□□□□ -1.9
UBP6YFR010W NDD1Q08887 554 aa3.19□□□□□ -1.9
UBP6YFR010W ATP20Q12233 115 aa3.19□□□□□ -1.9
UBP6YFR010W JID1Q12350 301 aa3.19□□□□□ -1.9
UBP6YFR010W COX5BP00425 151 aa3.18□□□□□ -1.9
UBP6YFR010W RPL9AP05738 191 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms