RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W RIF1P29539 1916 aa0.83□□□□□ -2.28
LOC1YFR001W TRR1P29509 319 aaKnown RBP0.82□□□□□ -2.28
LOC1YFR001W MOB1P40484 314 aa0.82□□□□□ -2.28
LOC1YFR001W YJR015WP47090 510 aa0.82□□□□□ -2.28
LOC1YFR001W XPT1P47165 209 aa0.82□□□□□ -2.28
LOC1YFR001W YGL230CP53074 147 aa0.82□□□□□ -2.28
LOC1YFR001W PEX11Q12462 236 aa0.82□□□□□ -2.28
LOC1YFR001W SEC72P39742 193 aaKnown RBP0.81□□□□□ -2.28
LOC1YFR001W YDC1Q02896 317 aa0.81□□□□□ -2.28
LOC1YFR001W NUF2P33895 451 aa0.8□□□□□ -2.28
LOC1YFR001W CSH1P38287 376 aa0.8□□□□□ -2.28
LOC1YFR001W YEL028WP39989 153 aa0.8□□□□□ -2.28
LOC1YFR001W GLR1P41921 483 aaKnown RBP0.8□□□□□ -2.28
LOC1YFR001W KEI1Q06346 221 aa0.8□□□□□ -2.28
LOC1YFR001W YDL157CQ12082 118 aa0.8□□□□□ -2.28
LOC1YFR001W PRE1P22141 198 aaKnown RBP0.79□□□□□ -2.28
LOC1YFR001W YGR269WP40326 108 aa0.79□□□□□ -2.28
LOC1YFR001W NQM1P53228 333 aaPredicted RBP0.79□□□□□ -2.28
LOC1YFR001W YIP3P53633 176 aa0.79□□□□□ -2.28
LOC1YFR001W YML079WQ03629 201 aa0.79□□□□□ -2.28
LOC1YFR001W TRM3Q07527 1436 aa0.79□□□□□ -2.28
LOC1YFR001W HRD1Q08109 551 aa0.78□□□□□ -2.28
LOC1YFR001W YLR050CQ12155 161 aaKnown RBP0.78□□□□□ -2.28
LOC1YFR001W SPS2P08459 502 aa0.77□□□□□ -2.29
LOC1YFR001W RAD51P25454 400 aa0.77□□□□□ -2.29
LOC1YFR001W PLP1Q04004 230 aa0.77□□□□□ -2.29
LOC1YFR001W THI74Q04083 370 aa0.77□□□□□ -2.29
LOC1YFR001W SYM1Q06563 197 aa0.77□□□□□ -2.29
LOC1YFR001W FCY1Q12178 158 aa0.77□□□□□ -2.29
LOC1YFR001W HFA1P32874 2273 aa0.77□□□□□ -2.29
LOC1YFR001W RPS25BP0C0T4 108 aaKnown RBP0.76□□□□□ -2.29
LOC1YFR001W YCR001WP25347 104 aa0.76□□□□□ -2.29
LOC1YFR001W SRP14P38985 146 aa0.76□□□□□ -2.29
LOC1YFR001W TMA23Q03525 211 aa0.76□□□□□ -2.29
LOC1YFR001W LIP1Q03579 150 aa0.76□□□□□ -2.29
LOC1YFR001W RPS25AQ3E792 108 aaPredicted RBP0.76□□□□□ -2.29
LOC1YFR001W KIN28P06242 306 aa0.75□□□□□ -2.29
LOC1YFR001W EGD2P38879 174 aaKnown RBP0.75□□□□□ -2.29
LOC1YFR001W HSK3P69852 69 aa0.75□□□□□ -2.29
LOC1YFR001W YOL013W-AP0C272 63 aaPredicted RBP0.74□□□□□ -2.29
LOC1YFR001W YDL241WQ07738 123 aa0.74□□□□□ -2.29
LOC1YFR001W ATG10Q07879 167 aa0.74□□□□□ -2.29
LOC1YFR001W INO4P13902 151 aa0.73□□□□□ -2.29
LOC1YFR001W YNL140CP53910 189 aa0.73□□□□□ -2.29
LOC1YFR001W UIP4Q08926 304 aa0.73□□□□□ -2.29
LOC1YFR001W CMD1P06787 147 aaKnown RBP0.72□□□□□ -2.29
LOC1YFR001W PTC1P35182 281 aa0.72□□□□□ -2.29
LOC1YFR001W APS3P47064 194 aa0.72□□□□□ -2.29
LOC1YFR001W GEP7P53171 287 aa0.72□□□□□ -2.29
LOC1YFR001W ATG38Q05789 226 aaKnown RBP0.72□□□□□ -2.29
LOC1YFR001W YPR114WQ06107 315 aa0.72□□□□□ -2.29
LOC1YFR001W TAF2P23255 1407 aa0.72□□□□□ -2.29
LOC1YFR001W SPT14P32363 452 aa0.71□□□□□ -2.3
LOC1YFR001W YPT31P38555 223 aaKnown RBP0.71□□□□□ -2.3
LOC1YFR001W CIN5P40917 295 aa0.71□□□□□ -2.3
LOC1YFR001W GLC8P41818 229 aa0.71□□□□□ -2.3
LOC1YFR001W RPL35AP0CX84 120 aaKnown RBP0.7□□□□□ -2.3
LOC1YFR001W RPL35BP0CX85 120 aaKnown RBP0.7□□□□□ -2.3
LOC1YFR001W YBR027CP38220 110 aa0.7□□□□□ -2.3
LOC1YFR001W YDR102CQ03864 110 aa0.7□□□□□ -2.3
LOC1YFR001W CMC4Q3E7A9 73 aa0.7□□□□□ -2.3
LOC1YFR001W SRP102P36057 244 aaPredicted RBP0.69□□□□□ -2.3
LOC1YFR001W HHY1P39982 102 aa0.69□□□□□ -2.3
LOC1YFR001W YEL014CP39999 101 aa0.68□□□□□ -2.3
LOC1YFR001W YGL101WP53144 215 aa0.68□□□□□ -2.3
LOC1YFR001W YNR064CP53750 290 aa0.68□□□□□ -2.3
LOC1YFR001W TMA20P89886 181 aaPredicted RBP0.68□□□□□ -2.3
LOC1YFR001W VAM10Q08474 114 aa0.68□□□□□ -2.3
LOC1YFR001W UBC6P33296 250 aaPredicted RBP0.67□□□□□ -2.3
LOC1YFR001W CCC1P47818 322 aa0.67□□□□□ -2.3
LOC1YFR001W PRP8P33334 2413 aaKnown RBP0.66□□□□□ -2.3
LOC1YFR001W ATP5P09457 212 aa0.66□□□□□ -2.3
LOC1YFR001W HSP150P32478 413 aa0.66□□□□□ -2.3
LOC1YFR001W YHR213W-BQ8TGK1 99 aa0.66□□□□□ -2.3
LOC1YFR001W HTD2P38790 280 aaKnown RBP0.65□□□□□ -2.31
LOC1YFR001W ORM1P53224 222 aa0.65□□□□□ -2.31
LOC1YFR001W GIM5Q04493 163 aa0.65□□□□□ -2.31
LOC1YFR001W YLR046CQ12253 270 aa0.65□□□□□ -2.31
LOC1YFR001W ADE6P38972 1358 aaKnown RBP0.65□□□□□ -2.31
LOC1YFR001W CDC39P25655 2108 aaKnown RBP0.65□□□□□ -2.31
LOC1YFR001W YER121WP40076 114 aa0.64□□□□□ -2.31
LOC1YFR001W YNL122CP53921 115 aaPredicted RBP0.64□□□□□ -2.31
LOC1YFR001W RDI1Q12434 202 aa0.64□□□□□ -2.31
LOC1YFR001W ROM2P51862 1356 aaKnown RBP0.64□□□□□ -2.31
LOC1YFR001W UBI4P0CG63 381 aaKnown RBP0.63□□□□□ -2.31
LOC1YFR001W MRS4P23500 304 aa0.63□□□□□ -2.31
LOC1YFR001W ATG8P38182 117 aaRIP-Chip data0.63□□□□□ -2.31not detected
LOC1YFR001W VPS51P36116 164 aa0.62□□□□□ -2.31
LOC1YFR001W ECM31P38122 312 aa0.62□□□□□ -2.31
LOC1YFR001W FES1P38260 290 aa0.62□□□□□ -2.31
LOC1YFR001W LSM3P57743 89 aaKnown RBP0.62□□□□□ -2.31
LOC1YFR001W FMN1Q03778 218 aa0.62□□□□□ -2.31
LOC1YFR001W NMA1Q06178 401 aaKnown RBP0.62□□□□□ -2.31
LOC1YFR001W IPT1P38954 527 aa0.61□□□□□ -2.31
LOC1YFR001W MGR2Q02889 113 aa0.61□□□□□ -2.31
LOC1YFR001W YLR053CQ12026 108 aa0.61□□□□□ -2.31
LOC1YFR001W SPA2P23201 1466 aaKnown RBP0.61□□□□□ -2.31
LOC1YFR001W HYP2P23301 157 aaKnown RBP0.6□□□□□ -2.31
LOC1YFR001W DLS1P40366 167 aa0.6□□□□□ -2.31
LOC1YFR001W SED1Q01589 338 aa0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms