RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W COS6P53344 381 aa1.61□□□□□ -2.15
SIR4YDR227W YNR048WP53740 393 aa1.61□□□□□ -2.15
SIR4YDR227W BUD25P85052 153 aa1.61□□□□□ -2.15
SIR4YDR227W PIR1Q03178 341 aa1.61□□□□□ -2.15
SIR4YDR227W YMR244WQ04018 355 aa1.61□□□□□ -2.15
SIR4YDR227W IES3Q12345 250 aa1.61□□□□□ -2.15
SIR4YDR227W YLR462WO13556 202 aa1.61□□□□□ -2.15
SIR4YDR227W SRY1P36007 326 aa1.61□□□□□ -2.15
SIR4YDR227W GPI18P38211 433 aa1.61□□□□□ -2.15
SIR4YDR227W YHR140WP38842 239 aa1.61□□□□□ -2.15
SIR4YDR227W YEA4P40004 342 aa1.61□□□□□ -2.15
SIR4YDR227W RIO2P40160 425 aaKnown RBP1.61□□□□□ -2.15
SIR4YDR227W SFT1P43682 97 aa1.61□□□□□ -2.15
SIR4YDR227W SNF4P12904 322 aa1.61□□□□□ -2.15
SIR4YDR227W ERD2P18414 219 aa1.61□□□□□ -2.15
SIR4YDR227W SNC1P31109 117 aa1.61□□□□□ -2.15
SIR4YDR227W SIM1P40472 476 aa1.61□□□□□ -2.15
SIR4YDR227W YIR020CP40575 100 aa1.61□□□□□ -2.15
SIR4YDR227W DOC1P53068 250 aa1.61□□□□□ -2.15
SIR4YDR227W RNH201P53942 307 aa1.61□□□□□ -2.15
SIR4YDR227W VPS28Q02767 242 aa1.61□□□□□ -2.15
SIR4YDR227W TRM10Q12400 293 aa1.61□□□□□ -2.15
SIR4YDR227W YMR175W-AQ3E766 64 aa1.61□□□□□ -2.15
SIR4YDR227W TSC3Q3E790 80 aa1.61□□□□□ -2.15
SIR4YDR227W GLC7P32598 312 aaKnown RBP1.6□□□□□ -2.15
SIR4YDR227W AVT5P38176 459 aa1.6□□□□□ -2.15
SIR4YDR227W YBL081WP38180 368 aaKnown RBP1.6□□□□□ -2.15
SIR4YDR227W MRH4P53166 561 aa1.6□□□□□ -2.15
SIR4YDR227W FMP41P53889 259 aaKnown RBP1.6□□□□□ -2.15
SIR4YDR227W EAF7P53911 425 aaKnown RBP1.6□□□□□ -2.15
SIR4YDR227W YMR315WQ04869 349 aaKnown RBP1.6□□□□□ -2.15
SIR4YDR227W BSC1Q12140 328 aa1.6□□□□□ -2.15
SIR4YDR227W YDL180WQ12301 547 aa1.6□□□□□ -2.15
SIR4YDR227W YAE1P47118 141 aaPredicted RBP1.6□□□□□ -2.15
SIR4YDR227W CAX4P53223 239 aa1.6□□□□□ -2.15
SIR4YDR227W SMD1Q02260 146 aaPredicted RBP1.6□□□□□ -2.15
SIR4YDR227W FYV12Q08559 129 aa1.6□□□□□ -2.15
SIR4YDR227W YEL009C-AA0A023PZF2 135 aa1.6□□□□□ -2.15
SIR4YDR227W CCA1P21269 546 aa1.6□□□□□ -2.15
SIR4YDR227W SPT14P32363 452 aa1.6□□□□□ -2.15
SIR4YDR227W CSH1P38287 376 aa1.6□□□□□ -2.15
SIR4YDR227W COQ10Q08058 207 aa1.6□□□□□ -2.15
SIR4YDR227W RPS13P05756 151 aaKnown RBP1.59□□□□□ -2.15
SIR4YDR227W YOL162WP0CF19 215 aa1.59□□□□□ -2.15
SIR4YDR227W RNQ1P25367 405 aa1.59□□□□□ -2.15
SIR4YDR227W UBC8P28263 218 aa1.59□□□□□ -2.15
SIR4YDR227W RPA12P32529 125 aaKnown RBP1.59□□□□□ -2.15
SIR4YDR227W ALK2P32789 676 aaPredicted RBP1.59□□□□□ -2.15
SIR4YDR227W NSG1P38837 291 aa1.59□□□□□ -2.15
SIR4YDR227W PRM8P53174 237 aa1.59□□□□□ -2.15
SIR4YDR227W API2Q04413 109 aa1.59□□□□□ -2.15
SIR4YDR227W PRM3Q08931 133 aa1.59□□□□□ -2.15
SIR4YDR227W YGL041W-AP0C5N3 154 aa1.59□□□□□ -2.15
SIR4YDR227W GPA2P10823 449 aa1.59□□□□□ -2.15
SIR4YDR227W ARN2P38724 620 aa1.59□□□□□ -2.15
SIR4YDR227W MIT1P40002 666 aa1.59□□□□□ -2.15
SIR4YDR227W PGD1P40356 397 aa1.59□□□□□ -2.15
SIR4YDR227W GTT1P40582 234 aa1.59□□□□□ -2.15
SIR4YDR227W YNL184CP53876 108 aa1.59□□□□□ -2.15
SIR4YDR227W TIM8P57744 87 aa1.59□□□□□ -2.15
SIR4YDR227W NUP49Q02199 472 aa1.59□□□□□ -2.15
SIR4YDR227W MRX9Q07349 420 aaKnown RBP1.59□□□□□ -2.15
SIR4YDR227W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
SIR4YDR227W YCR025CP25352 136 aa1.59□□□□□ -2.16
SIR4YDR227W TIP1P27654 210 aaPredicted RBP1.59□□□□□ -2.16
SIR4YDR227W SHE2P36068 246 aaKnown RBP RIP-Chip data1.59□□□□□ -2.16not detected
SIR4YDR227W YKR070WP36151 352 aaKnown RBP1.59□□□□□ -2.16
SIR4YDR227W YEL073CP39974 107 aa1.59□□□□□ -2.16
SIR4YDR227W EMC4P53073 190 aa1.59□□□□□ -2.16
SIR4YDR227W APS2Q00381 147 aa1.59□□□□□ -2.16
SIR4YDR227W EST3Q03096 181 aa1.59□□□□□ -2.16
SIR4YDR227W FIT1Q04433 528 aa1.59□□□□□ -2.16
SIR4YDR227W MIC19P43594 170 aa1.58□□□□□ -2.16
SIR4YDR227W UBC13P52490 153 aa1.58□□□□□ -2.16
SIR4YDR227W YNL010WP53981 241 aaKnown RBP1.58□□□□□ -2.16
SIR4YDR227W ODC1Q03028 310 aa1.58□□□□□ -2.16
SIR4YDR227W YML018CQ03730 393 aa1.58□□□□□ -2.16
SIR4YDR227W SPG3Q04398 127 aaPredicted RBP1.58□□□□□ -2.16
SIR4YDR227W YPS3Q12303 508 aa1.58□□□□□ -2.16
SIR4YDR227W SOD1P00445 154 aaKnown RBP1.58□□□□□ -2.16
SIR4YDR227W PTH1P38876 190 aaKnown RBP1.58□□□□□ -2.16
SIR4YDR227W VMA7P39111 118 aa1.58□□□□□ -2.16
SIR4YDR227W PFS2P42841 465 aaKnown RBP1.58□□□□□ -2.16
SIR4YDR227W YJR141WP47172 347 aaPredicted RBP1.58□□□□□ -2.16
SIR4YDR227W FMP49A0A023PZB3 126 aa1.58□□□□□ -2.16
SIR4YDR227W TOM40P23644 387 aaKnown RBP1.58□□□□□ -2.16
SIR4YDR227W GVP36P40531 326 aaKnown RBP1.58□□□□□ -2.16
SIR4YDR227W MCM22P47167 239 aa1.58□□□□□ -2.16
SIR4YDR227W YPL067CQ02754 198 aa1.58□□□□□ -2.16
SIR4YDR227W COF1Q03048 143 aaKnown RBP1.58□□□□□ -2.16
SIR4YDR227W FDH1Q08911 376 aa1.58□□□□□ -2.16
SIR4YDR227W TRP1P00912 224 aa1.57□□□□□ -2.16
SIR4YDR227W Q0255P03881 472 aa1.57□□□□□ -2.16
SIR4YDR227W MDH2P22133 377 aa1.57□□□□□ -2.16
SIR4YDR227W YCR043CP25361 127 aa1.57□□□□□ -2.16
SIR4YDR227W YPR174CQ06616 221 aaPredicted RBP1.57□□□□□ -2.16
SIR4YDR227W YPL257WQ08974 193 aa1.57□□□□□ -2.16
SIR4YDR227W YKL068W-AQ3E826 78 aa1.57□□□□□ -2.16
SIR4YDR227W COQ3P27680 312 aa1.57□□□□□ -2.16
SIR4YDR227W YAR1P46683 200 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms