RNA–Protein interactions for RNA: YDR224C

HTB1, Transcript of Histone H2B, yeast

Gene HTB1, Length 396 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTB1	YDR224C	TRR1	P29509	319 aa	Known RBP	0.87	□□□□□ -2.27
HTB1	YDR224C	SHB17	P36136	271 aa	Known RBP	0.87	□□□□□ -2.27
HTB1	YDR224C	YKR070W	P36151	352 aa	Known RBP	0.87	□□□□□ -2.27
HTB1	YDR224C	SEC72	P39742	193 aa	Known RBP	0.87	□□□□□ -2.27
HTB1	YDR224C	YEL073C	P39974	107 aa		0.87	□□□□□ -2.27
HTB1	YDR224C	POG1	P40473	351 aa		0.87	□□□□□ -2.27
HTB1	YDR224C	YML079W	Q03629	201 aa		0.87	□□□□□ -2.27
HTB1	YDR224C	GLR1	P41921	483 aa	Known RBP	0.86	□□□□□ -2.27
HTB1	YDR224C	XPT1	P47165	209 aa		0.86	□□□□□ -2.27
HTB1	YDR224C	PAC10	P48363	199 aa		0.86	□□□□□ -2.27
HTB1	YDR224C	YDC1	Q02896	317 aa		0.86	□□□□□ -2.27
HTB1	YDR224C	PLP1	Q04004	230 aa		0.86	□□□□□ -2.27
HTB1	YDR224C	AVO2	Q04749	426 aa		0.86	□□□□□ -2.27
HTB1	YDR224C	DUR1,2	P32528	1835 aa	Known RBP	0.86	□□□□□ -2.27
HTB1	YDR224C	KEI1	Q06346	221 aa		0.85	□□□□□ -2.27
HTB1	YDR224C	GRE1	Q08969	168 aa		0.85	□□□□□ -2.27
HTB1	YDR224C	TRM3	Q07527	1436 aa		0.84	□□□□□ -2.27
HTB1	YDR224C	YGR269W	P40326	108 aa		0.84	□□□□□ -2.27
HTB1	YDR224C	YGL230C	P53074	147 aa		0.84	□□□□□ -2.27
HTB1	YDR224C	NUF2	P33895	451 aa		0.83	□□□□□ -2.28
HTB1	YDR224C	YEL028W	P39989	153 aa		0.83	□□□□□ -2.28
HTB1	YDR224C	SYM1	Q06563	197 aa		0.83	□□□□□ -2.28
HTB1	YDR224C	FCY1	Q12178	158 aa		0.83	□□□□□ -2.28
HTB1	YDR224C	NQM1	P53228	333 aa	Predicted RBP	0.82	□□□□□ -2.28
HTB1	YDR224C	SPS2	P08459	502 aa		0.81	□□□□□ -2.28
HTB1	YDR224C	RPS25B	P0C0T4	108 aa	Known RBP	0.81	□□□□□ -2.28
HTB1	YDR224C	YCR001W	P25347	104 aa		0.81	□□□□□ -2.28
HTB1	YDR224C	TMA23	Q03525	211 aa		0.81	□□□□□ -2.28
HTB1	YDR224C	RPS25A	Q3E792	108 aa	Predicted RBP	0.81	□□□□□ -2.28
HTB1	YDR224C	CSH1	P38287	376 aa		0.8	□□□□□ -2.28
HTB1	YDR224C	SRP14	P38985	146 aa		0.8	□□□□□ -2.28
HTB1	YDR224C	GEP7	P53171	287 aa		0.8	□□□□□ -2.28
HTB1	YDR224C	YIP3	P53633	176 aa		0.8	□□□□□ -2.28
HTB1	YDR224C	LIP1	Q03579	150 aa		0.8	□□□□□ -2.28
HTB1	YDR224C	UIP4	Q08926	304 aa		0.8	□□□□□ -2.28
HTB1	YDR224C	YLR050C	Q12155	161 aa	Known RBP	0.8	□□□□□ -2.28
HTB1	YDR224C	CIN5	P40917	295 aa		0.79	□□□□□ -2.28
HTB1	YDR224C	KIN28	P06242	306 aa		0.78	□□□□□ -2.28
HTB1	YDR224C	CMD1	P06787	147 aa	Known RBP	0.78	□□□□□ -2.28
HTB1	YDR224C	RAD51	P25454	400 aa		0.78	□□□□□ -2.28
HTB1	YDR224C	THI74	Q04083	370 aa		0.78	□□□□□ -2.28
HTB1	YDR224C	PTC1	P35182	281 aa		0.77	□□□□□ -2.29
HTB1	YDR224C	EGD2	P38879	174 aa	Known RBP	0.77	□□□□□ -2.29
HTB1	YDR224C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.76	□□□□□ -2.29
HTB1	YDR224C	APS3	P47064	194 aa		0.76	□□□□□ -2.29
HTB1	YDR224C	ATG10	Q07879	167 aa		0.76	□□□□□ -2.29
HTB1	YDR224C	VAM10	Q08474	114 aa		0.76	□□□□□ -2.29
HTB1	YDR224C	INO4	P13902	151 aa		0.75	□□□□□ -2.29
HTB1	YDR224C	UBC6	P33296	250 aa	Predicted RBP	0.75	□□□□□ -2.29
HTB1	YDR224C	ATG38	Q05789	226 aa	Known RBP	0.75	□□□□□ -2.29
HTB1	YDR224C	YDL241W	Q07738	123 aa		0.75	□□□□□ -2.29
HTB1	YDR224C	TAF2	P23255	1407 aa		0.74	□□□□□ -2.29
HTB1	YDR224C	SPT14	P32363	452 aa		0.74	□□□□□ -2.29
HTB1	YDR224C	YBR027C	P38220	110 aa		0.74	□□□□□ -2.29
HTB1	YDR224C	SRP102	P36057	244 aa	Predicted RBP	0.73	□□□□□ -2.29
HTB1	YDR224C	YPT31	P38555	223 aa	Known RBP	0.73	□□□□□ -2.29
HTB1	YDR224C	HSK3	P69852	69 aa		0.73	□□□□□ -2.29
HTB1	YDR224C	TMA20	P89886	181 aa	Predicted RBP	0.73	□□□□□ -2.29
HTB1	YDR224C	YHR213W-B	Q8TGK1	99 aa		0.73	□□□□□ -2.29
HTB1	YDR224C	YEL014C	P39999	101 aa		0.72	□□□□□ -2.29
HTB1	YDR224C	YNL140C	P53910	189 aa		0.72	□□□□□ -2.29
HTB1	YDR224C	YPR114W	Q06107	315 aa		0.72	□□□□□ -2.29
HTB1	YDR224C	YGL101W	P53144	215 aa		0.71	□□□□□ -2.3
HTB1	YDR224C	YLR046C	Q12253	270 aa		0.71	□□□□□ -2.3
HTB1	YDR224C	CDC39	P25655	2108 aa	Known RBP	0.7	□□□□□ -2.3
HTB1	YDR224C	HHY1	P39982	102 aa		0.7	□□□□□ -2.3
HTB1	YDR224C	GLC8	P41818	229 aa		0.7	□□□□□ -2.3
HTB1	YDR224C	CCC1	P47818	322 aa		0.7	□□□□□ -2.3
HTB1	YDR224C	YNR064C	P53750	290 aa		0.7	□□□□□ -2.3
HTB1	YDR224C	YNL122C	P53921	115 aa	Predicted RBP	0.7	□□□□□ -2.3
HTB1	YDR224C	CMC4	Q3E7A9	73 aa		0.7	□□□□□ -2.3
HTB1	YDR224C	RIF1	P29539	1916 aa		0.7	□□□□□ -2.3
HTB1	YDR224C	ADE6	P38972	1358 aa	Known RBP	0.7	□□□□□ -2.3
HTB1	YDR224C	RPL35A	P0CX84	120 aa	Known RBP	0.69	□□□□□ -2.3
HTB1	YDR224C	RPL35B	P0CX85	120 aa	Known RBP	0.69	□□□□□ -2.3
HTB1	YDR224C	HSP150	P32478	413 aa		0.69	□□□□□ -2.3
HTB1	YDR224C	YDR102C	Q03864	110 aa		0.69	□□□□□ -2.3
HTB1	YDR224C	ATP5	P09457	212 aa		0.68	□□□□□ -2.3
HTB1	YDR224C	HTD2	P38790	280 aa	Known RBP	0.68	□□□□□ -2.3
HTB1	YDR224C	ECM31	P38122	312 aa		0.67	□□□□□ -2.3
HTB1	YDR224C	YOR072W	Q08486	104 aa		0.67	□□□□□ -2.3
HTB1	YDR224C	HYP2	P23301	157 aa	Known RBP	0.66	□□□□□ -2.3
HTB1	YDR224C	VPS51	P36116	164 aa		0.66	□□□□□ -2.3
HTB1	YDR224C	SED1	Q01589	338 aa		0.66	□□□□□ -2.3
HTB1	YDR224C	GIM5	Q04493	163 aa		0.66	□□□□□ -2.3
HTB1	YDR224C	NMA1	Q06178	401 aa	Known RBP	0.66	□□□□□ -2.3
HTB1	YDR224C	MGR2	Q02889	113 aa		0.65	□□□□□ -2.31
HTB1	YDR224C	ROM2	P51862	1356 aa	Known RBP	0.65	□□□□□ -2.31
HTB1	YDR224C	HAP2	P06774	265 aa		0.64	□□□□□ -2.31
HTB1	YDR224C	ORM1	P53224	222 aa		0.64	□□□□□ -2.31
HTB1	YDR224C	YDR476C	Q03362	224 aa		0.64	□□□□□ -2.31
HTB1	YDR224C	MAK3	Q03503	176 aa		0.64	□□□□□ -2.31
HTB1	YDR224C	FMN1	Q03778	218 aa		0.64	□□□□□ -2.31
HTB1	YDR224C	PRM3	Q08931	133 aa		0.64	□□□□□ -2.31
HTB1	YDR224C	RDI1	Q12434	202 aa		0.64	□□□□□ -2.31
HTB1	YDR224C	SPA2	P23201	1466 aa	Known RBP	0.64	□□□□□ -2.31
HTB1	YDR224C	RPS22A	P0C0W1	130 aa	Known RBP	0.63	□□□□□ -2.31
HTB1	YDR224C	YGL041W-A	P0C5N3	154 aa		0.63	□□□□□ -2.31
HTB1	YDR224C	UBI4	P0CG63	381 aa	Known RBP	0.63	□□□□□ -2.31
HTB1	YDR224C	ATG8	P38182	117 aa	RIP-Chip data	0.63	□□□□□ -2.31	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms