RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W YJR056CP47115 236 aa1.07□□□□□ -2.24
MSH5YDL154W RBL2P48606 106 aaKnown RBP1.07□□□□□ -2.24
MSH5YDL154W UBC12P52491 188 aa1.07□□□□□ -2.24
MSH5YDL154W CWC23P52868 283 aaPredicted RBP1.07□□□□□ -2.24
MSH5YDL154W BRR6P53062 197 aa1.07□□□□□ -2.24
MSH5YDL154W DOC1P53068 250 aa1.07□□□□□ -2.24
MSH5YDL154W RPL26BP53221 127 aaKnown RBP1.07□□□□□ -2.24
MSH5YDL154W SNO1Q03144 224 aa1.07□□□□□ -2.24
MSH5YDL154W FRQ1Q06389 190 aa1.07□□□□□ -2.24
MSH5YDL154W NIP7Q08962 181 aaKnown RBP1.07□□□□□ -2.24
MSH5YDL154W PEX11Q12462 236 aa1.07□□□□□ -2.24
MSH5YDL154W BOL1Q3E793 110 aa1.07□□□□□ -2.24
MSH5YDL154W KTI11Q3E840 82 aa1.07□□□□□ -2.24
MSH5YDL154W Q0255P03881 472 aa1.06□□□□□ -2.24
MSH5YDL154W YCR101CP25607 182 aa1.06□□□□□ -2.24
MSH5YDL154W PEX4P29340 183 aa1.06□□□□□ -2.24
MSH5YDL154W OAC1P32332 324 aa1.06□□□□□ -2.24
MSH5YDL154W SCM4P32564 187 aa1.06□□□□□ -2.24
MSH5YDL154W ECM31P38122 312 aa1.06□□□□□ -2.24
MSH5YDL154W RPF1P38805 295 aaKnown RBP1.06□□□□□ -2.24
MSH5YDL154W MRPL49P40858 161 aaPredicted RBP1.06□□□□□ -2.24
MSH5YDL154W NSE4P43124 402 aa1.06□□□□□ -2.24
MSH5YDL154W SOL1P50278 321 aa1.06□□□□□ -2.24
MSH5YDL154W YGL101WP53144 215 aa1.06□□□□□ -2.24
MSH5YDL154W ERV14P53173 138 aa1.06□□□□□ -2.24
MSH5YDL154W TMA20P89886 181 aaPredicted RBP1.06□□□□□ -2.24
MSH5YDL154W UIP4Q08926 304 aa1.06□□□□□ -2.24
MSH5YDL154W YDR157WA0A023PZE8 133 aa1.06□□□□□ -2.24
MSH5YDL154W ATP5P09457 212 aa1.06□□□□□ -2.24
MSH5YDL154W PTM1P32857 523 aa1.06□□□□□ -2.24
MSH5YDL154W APS1P35181 156 aa1.06□□□□□ -2.24
MSH5YDL154W YKR041WP36134 250 aa1.06□□□□□ -2.24
MSH5YDL154W YCR087C-AP37263 153 aa1.06□□□□□ -2.24
MSH5YDL154W URA8P38627 578 aaPredicted RBP1.06□□□□□ -2.24
MSH5YDL154W AVT2P39981 480 aa1.06□□□□□ -2.24
MSH5YDL154W CIS3P47001 227 aa1.06□□□□□ -2.24
MSH5YDL154W AIF1P52923 378 aa1.06□□□□□ -2.24
MSH5YDL154W MGA1P53050 456 aa1.06□□□□□ -2.24
MSH5YDL154W PRM8P53174 237 aa1.06□□□□□ -2.24
MSH5YDL154W YNR062CP53748 327 aa1.06□□□□□ -2.24
MSH5YDL154W YDR366CP87287 132 aa1.06□□□□□ -2.24
MSH5YDL154W YMR315WQ04869 349 aaKnown RBP1.06□□□□□ -2.24
MSH5YDL154W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
MSH5YDL154W RAD6P06104 172 aa1.05□□□□□ -2.24
MSH5YDL154W PRE1P22141 198 aaKnown RBP1.05□□□□□ -2.24
MSH5YDL154W PEX34P25584 144 aa1.05□□□□□ -2.24
MSH5YDL154W TRR1P29509 319 aaKnown RBP1.05□□□□□ -2.24
MSH5YDL154W SPT14P32363 452 aa1.05□□□□□ -2.24
MSH5YDL154W SPS18P32572 300 aa1.05□□□□□ -2.24
MSH5YDL154W YBR220CP38318 560 aa1.05□□□□□ -2.24
MSH5YDL154W AYR1P40471 297 aa1.05□□□□□ -2.24
MSH5YDL154W MNN5P46982 586 aa1.05□□□□□ -2.24
MSH5YDL154W YJR146WP47174 117 aa1.05□□□□□ -2.24
MSH5YDL154W YLR460CP54007 376 aa1.05□□□□□ -2.24
MSH5YDL154W YCL001W-AP87012 153 aa1.05□□□□□ -2.24
MSH5YDL154W APS2Q00381 147 aa1.05□□□□□ -2.24
MSH5YDL154W UBC7Q02159 165 aa1.05□□□□□ -2.24
MSH5YDL154W YMR099CQ03161 297 aaKnown RBP1.05□□□□□ -2.24
MSH5YDL154W AIM36Q03798 255 aa1.05□□□□□ -2.24
MSH5YDL154W YPR114WQ06107 315 aa1.05□□□□□ -2.24
MSH5YDL154W ATG40Q99325 256 aa1.05□□□□□ -2.24
MSH5YDL154W CDC7P06243 507 aa1.05□□□□□ -2.24
MSH5YDL154W SIR2P06700 562 aa1.05□□□□□ -2.24
MSH5YDL154W MRPL44P19956 98 aa1.05□□□□□ -2.24
MSH5YDL154W SCO1P23833 295 aa1.05□□□□□ -2.24
MSH5YDL154W ARO7P32178 256 aa1.05□□□□□ -2.24
MSH5YDL154W ACP1P32463 125 aa1.05□□□□□ -2.24
MSH5YDL154W HYM1P32464 399 aa1.05□□□□□ -2.24
MSH5YDL154W SRY1P36007 326 aa1.05□□□□□ -2.24
MSH5YDL154W LSM4P40070 187 aaKnown RBP1.05□□□□□ -2.24
MSH5YDL154W GPI14P47088 403 aaKnown RBP1.05□□□□□ -2.24
MSH5YDL154W YAE1P47118 141 aaPredicted RBP1.05□□□□□ -2.24
MSH5YDL154W TOS8P53147 276 aa1.05□□□□□ -2.24
MSH5YDL154W NQM1P53228 333 aaPredicted RBP1.05□□□□□ -2.24
MSH5YDL154W YGR219WP53307 113 aa1.05□□□□□ -2.24
MSH5YDL154W HHT1P61830 136 aa1.05□□□□□ -2.24
MSH5YDL154W AIM11P87275 137 aa1.05□□□□□ -2.24
MSH5YDL154W GAS3Q03655 524 aa1.05□□□□□ -2.24
MSH5YDL154W RNH202Q05635 350 aa1.05□□□□□ -2.24
MSH5YDL154W ZEO1Q08245 113 aa1.05□□□□□ -2.24
MSH5YDL154W YNG1Q08465 219 aa1.05□□□□□ -2.24
MSH5YDL154W YDL085C-AQ3E7B7 68 aaKnown RBP1.05□□□□□ -2.24
MSH5YDL154W TDA8Q6B2U8 126 aa1.05□□□□□ -2.24
MSH5YDL154W YCL001W-BQ96VH2 84 aa1.05□□□□□ -2.24
MSH5YDL154W SCL1P21243 252 aaKnown RBP1.04□□□□□ -2.24
MSH5YDL154W RPC19P28000 142 aaKnown RBP1.04□□□□□ -2.24
MSH5YDL154W YKL102CP34249 101 aa1.04□□□□□ -2.24
MSH5YDL154W UPS2P35200 230 aa1.04□□□□□ -2.24
MSH5YDL154W IKI1P38874 309 aa1.04□□□□□ -2.24
MSH5YDL154W ERG25P53045 309 aa1.04□□□□□ -2.24
MSH5YDL154W LPP1Q04396 274 aa1.04□□□□□ -2.24
MSH5YDL154W YOR342CQ12182 319 aa1.04□□□□□ -2.24
MSH5YDL154W EMC6Q12431 108 aa1.04□□□□□ -2.24
MSH5YDL154W STP22P25604 385 aa1.04□□□□□ -2.24
MSH5YDL154W MRPL28P36527 147 aa1.04□□□□□ -2.24
MSH5YDL154W ECM33P38248 429 aaKnown RBP1.04□□□□□ -2.24
MSH5YDL154W YBR090CP38253 122 aa1.04□□□□□ -2.24
MSH5YDL154W YEA6P39953 335 aa1.04□□□□□ -2.24
MSH5YDL154W NRK1P53915 240 aa1.04□□□□□ -2.24
MSH5YDL154W DYN2Q02647 92 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms