RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C BNA5Q05979 453 aa3.85□□□□□ -1.79
CDC48YDL126C RDI1Q12434 202 aa3.85□□□□□ -1.79
CDC48YDL126C FAB1P34756 2278 aa3.84□□□□□ -1.79
CDC48YDL126C YHR139C-AO13536 103 aa3.84□□□□□ -1.79
CDC48YDL126C NOP1P15646 327 aaKnown RBP3.84□□□□□ -1.79
CDC48YDL126C OAC1P32332 324 aa3.84□□□□□ -1.79
CDC48YDL126C TIR2P33890 251 aa3.84□□□□□ -1.79
CDC48YDL126C PAU16P35994 123 aa3.84□□□□□ -1.79
CDC48YDL126C MRPL11P36521 249 aaPredicted RBP3.84□□□□□ -1.79
CDC48YDL126C MIX23P38162 196 aa3.84□□□□□ -1.79
CDC48YDL126C YBR090CP38253 122 aa3.84□□□□□ -1.79
CDC48YDL126C AIM25P47140 327 aa3.84□□□□□ -1.79
CDC48YDL126C PDR17P53844 350 aa3.84□□□□□ -1.79
CDC48YDL126C HHT1P61830 136 aa3.84□□□□□ -1.79
CDC48YDL126C HSK3P69852 69 aa3.84□□□□□ -1.79
CDC48YDL126C KTI11Q3E840 82 aa3.84□□□□□ -1.79
CDC48YDL126C ZRT1P32804 376 aa3.84□□□□□ -1.8
CDC48YDL126C TMA19P35691 167 aaKnown RBP3.84□□□□□ -1.8
CDC48YDL126C MST27P53176 234 aa3.84□□□□□ -1.8
CDC48YDL126C YEL009C-AA0A023PZF2 135 aa3.83□□□□□ -1.8
CDC48YDL126C PAN3P36102 679 aaPredicted RBP3.83□□□□□ -1.8
CDC48YDL126C SMD3P43321 101 aaKnown RBP3.83□□□□□ -1.8
CDC48YDL126C YNR048WP53740 393 aa3.83□□□□□ -1.8
CDC48YDL126C ASI3P53983 676 aa3.83□□□□□ -1.8
CDC48YDL126C ARC18Q05933 178 aaKnown RBP3.83□□□□□ -1.8
CDC48YDL126C DIC1Q06143 298 aa3.83□□□□□ -1.8
CDC48YDL126C YCR075W-AQ3E830 75 aa3.83□□□□□ -1.8
CDC48YDL126C RPS25BP0C0T4 108 aaKnown RBP3.83□□□□□ -1.8
CDC48YDL126C COX10P21592 462 aa3.83□□□□□ -1.8
CDC48YDL126C PCL1P24867 279 aa3.83□□□□□ -1.8
CDC48YDL126C YER188WP40103 239 aa3.83□□□□□ -1.8
CDC48YDL126C PFS2P42841 465 aaKnown RBP3.83□□□□□ -1.8
CDC48YDL126C TTI2P47168 421 aa3.83□□□□□ -1.8
CDC48YDL126C BAT2P47176 376 aaKnown RBP3.83□□□□□ -1.8
CDC48YDL126C YGL262WP53054 175 aa3.83□□□□□ -1.8
CDC48YDL126C HNT1Q04344 158 aaKnown RBP3.83□□□□□ -1.8
CDC48YDL126C RPS25AQ3E792 108 aaPredicted RBP3.83□□□□□ -1.8
CDC48YDL126C FRM2P37261 193 aa3.82□□□□□ -1.8
CDC48YDL126C ECM33P38248 429 aaKnown RBP3.82□□□□□ -1.8
CDC48YDL126C TRR2P38816 342 aa3.82□□□□□ -1.8
CDC48YDL126C AIM11P87275 137 aa3.82□□□□□ -1.8
CDC48YDL126C ABF2Q02486 183 aa3.82□□□□□ -1.8
CDC48YDL126C UPS3Q04006 179 aa3.82□□□□□ -1.8
CDC48YDL126C YDL211CQ12121 372 aa3.82□□□□□ -1.8
CDC48YDL126C ATG40Q99325 256 aa3.82□□□□□ -1.8
CDC48YDL126C YBR292CP38357 123 aa3.82□□□□□ -1.8
CDC48YDL126C YNR064CP53750 290 aa3.82□□□□□ -1.8
CDC48YDL126C YLR152CP54072 576 aa3.82□□□□□ -1.8
CDC48YDL126C ELP6Q04868 273 aa3.82□□□□□ -1.8
CDC48YDL126C SME1Q12330 94 aaPredicted RBP3.82□□□□□ -1.8
CDC48YDL126C ISD11Q6Q560 94 aa3.82□□□□□ -1.8
CDC48YDL126C COX9P07255 59 aa3.81□□□□□ -1.8
CDC48YDL126C YOL162WP0CF19 215 aa3.81□□□□□ -1.8
CDC48YDL126C KRE1P17260 313 aa3.81□□□□□ -1.8
CDC48YDL126C RPS20P38701 121 aaKnown RBP3.81□□□□□ -1.8
CDC48YDL126C ECM34P38728 170 aa3.81□□□□□ -1.8
CDC48YDL126C PRE5P40302 234 aaKnown RBP3.81□□□□□ -1.8
CDC48YDL126C YIP1P53039 248 aa3.81□□□□□ -1.8
CDC48YDL126C ERG13P54839 491 aaKnown RBP3.81□□□□□ -1.8
CDC48YDL126C YLR412C-AQ3E742 68 aa3.81□□□□□ -1.8
CDC48YDL126C HEM4P06174 275 aa3.81□□□□□ -1.8
CDC48YDL126C MMS2P53152 137 aa3.81□□□□□ -1.8
CDC48YDL126C YKL023C-AQ2V2P3 75 aa3.81□□□□□ -1.8
CDC48YDL126C ARF1P11076 181 aaKnown RBP3.8□□□□□ -1.8
CDC48YDL126C REC114P32841 428 aa3.8□□□□□ -1.8
CDC48YDL126C SWD2P36104 329 aaPredicted RBP3.8□□□□□ -1.8
CDC48YDL126C PRM5P40476 318 aa3.8□□□□□ -1.8
CDC48YDL126C UBC13P52490 153 aa3.8□□□□□ -1.8
CDC48YDL126C HRI1Q05905 244 aaKnown RBP3.8□□□□□ -1.8
CDC48YDL126C IZH2Q12442 317 aa3.8□□□□□ -1.8
CDC48YDL126C PBI2P0CT04 75 aaKnown RBP3.8□□□□□ -1.8
CDC48YDL126C RPB8P20436 146 aa3.8□□□□□ -1.8
CDC48YDL126C YGP1P38616 354 aaKnown RBP3.8□□□□□ -1.8
CDC48YDL126C YHR130CP38834 111 aa3.8□□□□□ -1.8
CDC48YDL126C RPB11P38902 120 aa3.8□□□□□ -1.8
CDC48YDL126C WWM1P43582 211 aaKnown RBP3.8□□□□□ -1.8
CDC48YDL126C MIC27P50945 234 aa3.8□□□□□ -1.8
CDC48YDL126C TPC1P53257 314 aa3.8□□□□□ -1.8
CDC48YDL126C DUG3P53871 357 aa3.8□□□□□ -1.8
CDC48YDL126C SEN15Q04675 128 aa3.8□□□□□ -1.8
CDC48YDL126C PCL9Q12477 304 aa3.8□□□□□ -1.8
CDC48YDL126C VAR1P02381 398 aa3.79□□□□□ -1.8
CDC48YDL126C YIL029CP40538 142 aa3.79□□□□□ -1.8
CDC48YDL126C POP1P41812 875 aa3.79□□□□□ -1.8
CDC48YDL126C EAF3Q12432 401 aa3.79□□□□□ -1.8
CDC48YDL126C DFM1Q12743 341 aaKnown RBP3.79□□□□□ -1.8
CDC48YDL126C MSI1P13712 422 aa3.79□□□□□ -1.8
CDC48YDL126C TIP1P27654 210 aaPredicted RBP3.79□□□□□ -1.8
CDC48YDL126C SHE1P38200 338 aa3.79□□□□□ -1.8
CDC48YDL126C NSA2P40078 261 aaKnown RBP3.79□□□□□ -1.8
CDC48YDL126C INP1Q03694 420 aa3.79□□□□□ -1.8
CDC48YDL126C YMR090WQ04304 227 aaKnown RBP3.79□□□□□ -1.8
CDC48YDL126C LIP2Q06005 328 aa3.79□□□□□ -1.8
CDC48YDL126C SEI1Q06058 285 aa3.79□□□□□ -1.8
CDC48YDL126C PRM3Q08931 133 aa3.79□□□□□ -1.8
CDC48YDL126C YPL162CQ12042 273 aa3.79□□□□□ -1.8
CDC48YDL126C YIL102C-AQ2V2P5 75 aa3.79□□□□□ -1.8
CDC48YDL126C MDM10P18409 493 aa3.78□□□□□ -1.8
CDC48YDL126C YCR100CP25606 316 aa3.78□□□□□ -1.8
CDC48YDL126C YIL086CP40503 102 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms