RNA–Protein interactions for RNA: YBR286W

APE3, Transcript of Vacuolar aminopeptidase Y, yeast

Gene APE3, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APE3	YBR286W	DSK2	P48510	373 aa		4.67	□□□□□ -1.66
APE3	YBR286W	IRC23	Q08416	157 aa		4.67	□□□□□ -1.66
APE3	YBR286W	LAC1	P28496	418 aa		4.66	□□□□□ -1.66
APE3	YBR286W	FPR2	P32472	135 aa		4.66	□□□□□ -1.66
APE3	YBR286W	RAD23	P32628	398 aa	Known RBP	4.66	□□□□□ -1.66
APE3	YBR286W	YBL071C	P38185	102 aa		4.66	□□□□□ -1.66
APE3	YBR286W	CSH1	P38287	376 aa		4.66	□□□□□ -1.66
APE3	YBR286W	NOP16	P40007	231 aa	Known RBP	4.66	□□□□□ -1.66
APE3	YBR286W	PGD1	P40356	397 aa		4.66	□□□□□ -1.66
APE3	YBR286W	VMA21	P41806	77 aa		4.66	□□□□□ -1.66
APE3	YBR286W	ATG27	P46989	271 aa		4.66	□□□□□ -1.66
APE3	YBR286W	PUS4	P48567	403 aa	Known RBP	4.66	□□□□□ -1.66
APE3	YBR286W	TIM21	P53220	239 aa		4.66	□□□□□ -1.66
APE3	YBR286W	LST7	P53237	242 aa		4.66	□□□□□ -1.66
APE3	YBR286W	RAD28	Q12021	506 aa		4.66	□□□□□ -1.66
APE3	YBR286W	PRE9	P23638	258 aa	Known RBP	4.65	□□□□□ -1.66
APE3	YBR286W	YPS1	P32329	569 aa		4.65	□□□□□ -1.66
APE3	YBR286W	GPP2	P40106	250 aa	Known RBP	4.65	□□□□□ -1.66
APE3	YBR286W	NSE4	P43124	402 aa		4.65	□□□□□ -1.66
APE3	YBR286W	HAM1	P47119	197 aa	Known RBP	4.65	□□□□□ -1.66
APE3	YBR286W	DAN1	P47178	298 aa		4.65	□□□□□ -1.66
APE3	YBR286W	ATC1	Q04005	294 aa		4.65	□□□□□ -1.66
APE3	YBR286W	LRS4	Q04087	347 aa	Known RBP	4.65	□□□□□ -1.66
APE3	YBR286W	PBP4	Q07362	185 aa	Known RBP	4.65	□□□□□ -1.66
APE3	YBR286W	RXT3	Q07458	294 aa		4.65	□□□□□ -1.66
APE3	YBR286W	RKI1	Q12189	258 aa		4.65	□□□□□ -1.66
APE3	YBR286W	ILV5	P06168	395 aa	Known RBP	4.64	□□□□□ -1.67
APE3	YBR286W	CDC7	P06243	507 aa		4.64	□□□□□ -1.67
APE3	YBR286W	ADH3	P07246	375 aa	Known RBP	4.64	□□□□□ -1.67
APE3	YBR286W	PHO85	P17157	305 aa		4.64	□□□□□ -1.67
APE3	YBR286W	SEC59	P20048	519 aa		4.64	□□□□□ -1.67
APE3	YBR286W	RPS2	P25443	254 aa	Known RBP	4.64	□□□□□ -1.67
APE3	YBR286W	COQ3	P27680	312 aa		4.64	□□□□□ -1.67
APE3	YBR286W	POP5	P28005	173 aa		4.64	□□□□□ -1.67
APE3	YBR286W	MRPL4	P36517	319 aa		4.64	□□□□□ -1.67
APE3	YBR286W	SDH4	P37298	181 aa		4.64	□□□□□ -1.67
APE3	YBR286W	CDS1	P38221	457 aa		4.64	□□□□□ -1.67
APE3	YBR286W	IMD2	P38697	523 aa	Known RBP	4.64	□□□□□ -1.67
APE3	YBR286W	PET100	P38958	111 aa		4.64	□□□□□ -1.67
APE3	YBR286W	PIC2	P40035	300 aa		4.64	□□□□□ -1.67
APE3	YBR286W	SAS2	P40963	338 aa		4.64	□□□□□ -1.67
APE3	YBR286W	LOA1	Q06508	300 aa		4.64	□□□□□ -1.67
APE3	YBR286W	YLR118C	Q12354	227 aa		4.64	□□□□□ -1.67
APE3	YBR286W	PET494	P07390	489 aa	Predicted RBP	4.64	□□□□□ -1.67
APE3	YBR286W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
APE3	YBR286W	RPB3	P16370	318 aa	Known RBP	4.64	□□□□□ -1.67
APE3	YBR286W	MRPS9	P38120	278 aa		4.64	□□□□□ -1.67
APE3	YBR286W	AVT5	P38176	459 aa		4.64	□□□□□ -1.67
APE3	YBR286W	DOG2	P38773	246 aa		4.64	□□□□□ -1.67
APE3	YBR286W	DOG1	P38774	246 aa		4.64	□□□□□ -1.67
APE3	YBR286W	YFL054C	P43549	646 aa		4.64	□□□□□ -1.67
APE3	YBR286W	HIT1	P46973	164 aa		4.64	□□□□□ -1.67
APE3	YBR286W	YGR026W	P53217	278 aa		4.64	□□□□□ -1.67
APE3	YBR286W	YML122C	Q03207	126 aa		4.64	□□□□□ -1.67
APE3	YBR286W	LDS2	Q08218	356 aa		4.64	□□□□□ -1.67
APE3	YBR286W	RNA15	P25299	296 aa	Predicted RBP	4.63	□□□□□ -1.67
APE3	YBR286W	AFR1	P33304	620 aa		4.63	□□□□□ -1.67
APE3	YBR286W	DUT1	P33317	147 aa		4.63	□□□□□ -1.67
APE3	YBR286W	MRPL38	P35996	138 aa	Predicted RBP	4.63	□□□□□ -1.67
APE3	YBR286W	LSM2	P38203	95 aa	Known RBP	4.63	□□□□□ -1.67
APE3	YBR286W	LSM4	P40070	187 aa	Known RBP	4.63	□□□□□ -1.67
APE3	YBR286W	YIL163C	P40448	117 aa		4.63	□□□□□ -1.67
APE3	YBR286W	STP4	Q07351	490 aa		4.63	□□□□□ -1.67
APE3	YBR286W	RPS22A	P0C0W1	130 aa	Known RBP	4.62	□□□□□ -1.67
APE3	YBR286W	PHD1	P36093	366 aa		4.62	□□□□□ -1.67
APE3	YBR286W	YBR013C	P38215	129 aa		4.62	□□□□□ -1.67
APE3	YBR286W	GLE2	P40066	365 aa		4.62	□□□□□ -1.67
APE3	YBR286W	PAU15	P40585	124 aa		4.62	□□□□□ -1.67
APE3	YBR286W	MOG1	P47123	218 aa		4.62	□□□□□ -1.67
APE3	YBR286W	HST4	P53688	370 aa		4.62	□□□□□ -1.67
APE3	YBR286W	AYT1	Q12226	474 aa		4.62	□□□□□ -1.67
APE3	YBR286W	YHR213W	P0CI67	198 aa		4.61	□□□□□ -1.67
APE3	YBR286W	POF1	P25576	258 aa		4.61	□□□□□ -1.67
APE3	YBR286W	HMX1	P32339	317 aa		4.61	□□□□□ -1.67
APE3	YBR286W	SFT2	P38166	215 aa		4.61	□□□□□ -1.67
APE3	YBR286W	RRT1	P38192	103 aa		4.61	□□□□□ -1.67
APE3	YBR286W	HUA1	P40325	198 aa		4.61	□□□□□ -1.67
APE3	YBR286W	GTT1	P40582	234 aa		4.61	□□□□□ -1.67
APE3	YBR286W	YJL027C	P47063	138 aa	Predicted RBP	4.61	□□□□□ -1.67
APE3	YBR286W	YNR071C	P53757	342 aa		4.61	□□□□□ -1.67
APE3	YBR286W	OCA2	P53949	197 aa		4.61	□□□□□ -1.67
APE3	YBR286W	FIT2	Q08906	153 aa		4.61	□□□□□ -1.67
APE3	YBR286W	YER145C-A	A0A023PYF4	145 aa		4.61	□□□□□ -1.67
APE3	YBR286W	RPB9	P27999	122 aa		4.61	□□□□□ -1.67
APE3	YBR286W	SUA7	P29055	345 aa	Predicted RBP	4.61	□□□□□ -1.67
APE3	YBR286W	YBR090C	P38253	122 aa		4.61	□□□□□ -1.67
APE3	YBR286W	SNU13	P39990	126 aa	Known RBP	4.61	□□□□□ -1.67
APE3	YBR286W	GPI2	P46961	280 aa		4.61	□□□□□ -1.67
APE3	YBR286W	IMP2	P46972	177 aa		4.61	□□□□□ -1.67
APE3	YBR286W	MGA1	P53050	456 aa		4.61	□□□□□ -1.67
APE3	YBR286W	SWT21	P53873	357 aa	Predicted RBP	4.61	□□□□□ -1.67
APE3	YBR286W	RAV2	Q03956	351 aa		4.61	□□□□□ -1.67
APE3	YBR286W	ZEO1	Q08245	113 aa		4.61	□□□□□ -1.67
APE3	YBR286W	HSP12	P22943	109 aa	Known RBP	4.6	□□□□□ -1.67
APE3	YBR286W	NNK1	P36003	928 aa		4.6	□□□□□ -1.67
APE3	YBR286W	YKL069W	P36088	180 aa		4.6	□□□□□ -1.67
APE3	YBR286W	SRP14	P38985	146 aa		4.6	□□□□□ -1.67
APE3	YBR286W	FYV6	P53913	173 aa		4.6	□□□□□ -1.67
APE3	YBR286W	DAD3	P69850	94 aa		4.6	□□□□□ -1.67
APE3	YBR286W	YPL108W	Q02872	168 aa	Predicted RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms