RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W FCY2P17064 533 aa3.17□□□□□ -1.9
CKS1YBR135W SUI1P32911 108 aaKnown RBP3.17□□□□□ -1.9
CKS1YBR135W SLM6P38343 150 aa3.17□□□□□ -1.9
CKS1YBR135W GLE2P40066 365 aa3.17□□□□□ -1.9
CKS1YBR135W PEX17P40155 199 aa3.17□□□□□ -1.9
CKS1YBR135W HPM1P40481 377 aa3.17□□□□□ -1.9
CKS1YBR135W SLM2P53955 656 aa3.17□□□□□ -1.9
CKS1YBR135W HSK3P69852 69 aa3.17□□□□□ -1.9
CKS1YBR135W UBC7Q02159 165 aa3.17□□□□□ -1.9
CKS1YBR135W NEJ1Q06148 342 aa3.17□□□□□ -1.9
CKS1YBR135W FRQ1Q06389 190 aa3.17□□□□□ -1.9
CKS1YBR135W MDM32Q12171 622 aa3.17□□□□□ -1.9
CKS1YBR135W MHT1Q12525 324 aa3.17□□□□□ -1.9
CKS1YBR135W RIB3Q99258 208 aa3.17□□□□□ -1.9
CKS1YBR135W SAS5Q99314 248 aa3.17□□□□□ -1.9
CKS1YBR135W YHR139C-AO13536 103 aa3.16□□□□□ -1.9
CKS1YBR135W SCO1P23833 295 aa3.16□□□□□ -1.9
CKS1YBR135W OCH1P31755 480 aa3.16□□□□□ -1.9
CKS1YBR135W CAT5P41735 233 aa3.16□□□□□ -1.9
CKS1YBR135W CUP9P41817 306 aa3.16□□□□□ -1.9
CKS1YBR135W AIM25P47140 327 aa3.16□□□□□ -1.9
CKS1YBR135W RBL2P48606 106 aaKnown RBP3.16□□□□□ -1.9
CKS1YBR135W YNL184CP53876 108 aa3.16□□□□□ -1.9
CKS1YBR135W PET191Q02772 108 aa3.16□□□□□ -1.9
CKS1YBR135W MET31Q03081 177 aa3.16□□□□□ -1.9
CKS1YBR135W YPL257WQ08974 193 aa3.16□□□□□ -1.9
CKS1YBR135W PST2Q12335 198 aaKnown RBP3.16□□□□□ -1.9
CKS1YBR135W SLO1Q3E784 85 aa3.16□□□□□ -1.9
CKS1YBR135W HTL1Q9URQ5 78 aa3.16□□□□□ -1.9
CKS1YBR135W PBI2P0CT04 75 aaKnown RBP3.15□□□□□ -1.91
CKS1YBR135W MRPS28P21771 286 aa3.15□□□□□ -1.91
CKS1YBR135W AHC2P25649 128 aa3.15□□□□□ -1.91
CKS1YBR135W RPS27AP35997 82 aaKnown RBP3.15□□□□□ -1.91
CKS1YBR135W RPS27BP38711 82 aa3.15□□□□□ -1.91
CKS1YBR135W ARC15P40518 154 aaRIP-Chip data3.15□□□□□ -1.91not detected
CKS1YBR135W FAR7P43592 221 aa3.15□□□□□ -1.91
CKS1YBR135W RPA43P46669 326 aa3.15□□□□□ -1.91
CKS1YBR135W YJR146WP47174 117 aa3.15□□□□□ -1.91
CKS1YBR135W UBC12P52491 188 aa3.15□□□□□ -1.91
CKS1YBR135W PRM8P53174 237 aa3.15□□□□□ -1.91
CKS1YBR135W ARL3Q02804 198 aa3.15□□□□□ -1.91
CKS1YBR135W MIX17Q03667 156 aa3.15□□□□□ -1.91
CKS1YBR135W YDR249CQ03787 373 aa3.15□□□□□ -1.91
CKS1YBR135W RAV2Q03956 351 aa3.15□□□□□ -1.91
CKS1YBR135W YPR202WQ08993 238 aa3.15□□□□□ -1.91
CKS1YBR135W SLH1P53327 1967 aaKnown RBP3.14□□□□□ -1.91
CKS1YBR135W RPL43AP0CX25 92 aaKnown RBP3.14□□□□□ -1.91
CKS1YBR135W RPL43BP0CX26 92 aa3.14□□□□□ -1.91
CKS1YBR135W GSP1P32835 219 aaKnown RBP3.14□□□□□ -1.91
CKS1YBR135W GSP2P32836 220 aaKnown RBP3.14□□□□□ -1.91
CKS1YBR135W APS1P35181 156 aa3.14□□□□□ -1.91
CKS1YBR135W DOG2P38773 246 aa3.14□□□□□ -1.91
CKS1YBR135W DOG1P38774 246 aa3.14□□□□□ -1.91
CKS1YBR135W YHR125WP38831 101 aa3.14□□□□□ -1.91
CKS1YBR135W SDH7Q04401 133 aa3.14□□□□□ -1.91
CKS1YBR135W YOR304C-AO14468 76 aa3.13□□□□□ -1.91
CKS1YBR135W RAS2P01120 322 aaKnown RBP3.13□□□□□ -1.91
CKS1YBR135W Q0255P03881 472 aa3.13□□□□□ -1.91
CKS1YBR135W CCA1P21269 546 aa3.13□□□□□ -1.91
CKS1YBR135W ATG22P25568 528 aa3.13□□□□□ -1.91
CKS1YBR135W YCR101CP25607 182 aa3.13□□□□□ -1.91
CKS1YBR135W RPC19P28000 142 aaKnown RBP3.13□□□□□ -1.91
CKS1YBR135W FMP23P38231 175 aa3.13□□□□□ -1.91
CKS1YBR135W YBR285WP38354 144 aa3.13□□□□□ -1.91
CKS1YBR135W RPF1P38805 295 aaKnown RBP3.13□□□□□ -1.91
CKS1YBR135W SMD3P43321 101 aaKnown RBP3.13□□□□□ -1.91
CKS1YBR135W GPI14P47088 403 aaKnown RBP3.13□□□□□ -1.91
CKS1YBR135W YJR015WP47090 510 aa3.13□□□□□ -1.91
CKS1YBR135W ERV29P53337 310 aa3.13□□□□□ -1.91
CKS1YBR135W LSM7P53905 115 aaKnown RBP3.13□□□□□ -1.91
CKS1YBR135W YNL010WP53981 241 aaKnown RBP3.13□□□□□ -1.91
CKS1YBR135W GAS3Q03655 524 aa3.13□□□□□ -1.91
CKS1YBR135W SHH4Q06236 168 aa3.13□□□□□ -1.91
CKS1YBR135W YOL160WQ08321 113 aa3.13□□□□□ -1.91
CKS1YBR135W NIP7Q08962 181 aaKnown RBP3.13□□□□□ -1.91
CKS1YBR135W YPL225WQ08971 146 aaKnown RBP3.13□□□□□ -1.91
CKS1YBR135W YOR342CQ12182 319 aa3.13□□□□□ -1.91
CKS1YBR135W SEC4P07560 215 aaKnown RBP3.12□□□□□ -1.91
CKS1YBR135W YSF3P0C074 85 aaPredicted RBP3.12□□□□□ -1.91
CKS1YBR135W SNF4P12904 322 aa3.12□□□□□ -1.91
CKS1YBR135W UTR5P32630 166 aa3.12□□□□□ -1.91
CKS1YBR135W CLB6P32943 380 aa3.12□□□□□ -1.91
CKS1YBR135W SFK1P35735 353 aa3.12□□□□□ -1.91
CKS1YBR135W RGI1P40043 161 aaPredicted RBP3.12□□□□□ -1.91
CKS1YBR135W RPS12P48589 143 aaKnown RBP3.12□□□□□ -1.91
CKS1YBR135W YGL101WP53144 215 aa3.12□□□□□ -1.91
CKS1YBR135W YMR320WQ04897 101 aa3.12□□□□□ -1.91
CKS1YBR135W YPR174CQ06616 221 aaPredicted RBP3.12□□□□□ -1.91
CKS1YBR135W RDS3Q06835 107 aaPredicted RBP3.12□□□□□ -1.91
CKS1YBR135W YOR020W-AQ3E824 90 aa3.12□□□□□ -1.91
CKS1YBR135W YBR056W-AI2HB52 66 aa3.11□□□□□ -1.91
CKS1YBR135W RPL25P04456 142 aaKnown RBP3.11□□□□□ -1.91
CKS1YBR135W SIR2P06700 562 aa3.11□□□□□ -1.91
CKS1YBR135W TFC1P32367 649 aa3.11□□□□□ -1.91
CKS1YBR135W SCM4P32564 187 aa3.11□□□□□ -1.91
CKS1YBR135W SEC17P32602 292 aa3.11□□□□□ -1.91
CKS1YBR135W YBR032WP38223 100 aa3.11□□□□□ -1.91
CKS1YBR135W AYR1P40471 297 aa3.11□□□□□ -1.91
CKS1YBR135W GLC8P41818 229 aa3.11□□□□□ -1.91
CKS1YBR135W DID2P69771 204 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms