RNA–Protein interactions for RNA: YBR041W

FAT1, Transcript of Very long chain fatty acyl-CoA synthetase and fatty acid transporter, yeast

Gene FAT1, Length 2,010 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAT1	YBR041W	SHH3	Q04487	196 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	LOA1	Q06508	300 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	PAA1	Q12447	191 aa	Known RBP	3.12	□□□□□ -1.91
FAT1	YBR041W	FMP49	A0A023PZB3	126 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	TRP4	P07285	380 aa	Predicted RBP	3.12	□□□□□ -1.91
FAT1	YBR041W	SOR1	P35497	357 aa	Known RBP	3.12	□□□□□ -1.91
FAT1	YBR041W	YFL054C	P43549	646 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	HIT1	P46973	164 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	PIR5	P46999	287 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	GLO1	P50107	326 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	SSU72	P53538	206 aa	Predicted RBP	3.12	□□□□□ -1.91
FAT1	YBR041W	YNL046W	P53956	172 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	ATC1	Q04005	294 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	YDR114C	Q04597	100 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	SOR2	Q07786	357 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	RNH203	Q12338	110 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	MRPL23	Q12487	163 aa	Predicted RBP	3.12	□□□□□ -1.91
FAT1	YBR041W	YNR034W-A	Q3E841	98 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	YMR105W-A	Q8TGS8	64 aa		3.12	□□□□□ -1.91
FAT1	YBR041W	TOR2	P32600	2474 aa	Known RBP	3.11	□□□□□ -1.91
FAT1	YBR041W	ILV5	P06168	395 aa	Known RBP	3.11	□□□□□ -1.91
FAT1	YBR041W	ATP10	P18496	279 aa		3.11	□□□□□ -1.91
FAT1	YBR041W	YKL102C	P34249	101 aa		3.11	□□□□□ -1.91
FAT1	YBR041W	YBR220C	P38318	560 aa		3.11	□□□□□ -1.91
FAT1	YBR041W	YGR149W	P48236	432 aa		3.11	□□□□□ -1.91
FAT1	YBR041W	DAD3	P69850	94 aa		3.11	□□□□□ -1.91
FAT1	YBR041W	YOR029W	Q12243	111 aa		3.11	□□□□□ -1.91
FAT1	YBR041W	MRS3	P10566	314 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	YKL075C	P36083	450 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	YFL015C	P43578	164 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	OST3	P48439	350 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	DSK2	P48510	373 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	YGR018C	P53211	109 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	CPD1	P53314	239 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	CRZ1	P53968	678 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	ATP19	P81451	68 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	SED1	Q01589	338 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	STD1	Q02794	444 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	SEN15	Q04675	128 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	YTH1	Q06102	208 aa	Predicted RBP	3.1	□□□□□ -1.91
FAT1	YBR041W	TMA10	Q06177	86 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	LDS2	Q08218	356 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	DCN1	Q12395	269 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	RPL39	P04650	51 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	PIS1	P06197	220 aa	Known RBP	3.1	□□□□□ -1.91
FAT1	YBR041W	TIR1	P10863	254 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	MRPL44	P19956	98 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	RAD23	P32628	398 aa	Known RBP	3.1	□□□□□ -1.91
FAT1	YBR041W	CSH1	P38287	376 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	BDH1	P39714	382 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
FAT1	YBR041W	YHP1	Q04116	353 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	TRI1	Q05024	226 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	MSC3	Q05812	728 aa		3.1	□□□□□ -1.91
FAT1	YBR041W	TOR1	P35169	2470 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	SOD1	P00445	154 aa	Known RBP	3.09	□□□□□ -1.91
FAT1	YBR041W	POR1	P04840	283 aa	Known RBP	3.09	□□□□□ -1.91
FAT1	YBR041W	HMRA1	P0CY11	126 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	NOP1	P15646	327 aa	Known RBP	3.09	□□□□□ -1.91
FAT1	YBR041W	SUA7	P29055	345 aa	Predicted RBP	3.09	□□□□□ -1.91
FAT1	YBR041W	QRI5	P32344	111 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	MIA40	P36046	403 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	YGP1	P38616	354 aa	Known RBP	3.09	□□□□□ -1.91
FAT1	YBR041W	YHR173C	P38864	112 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	YIL077C	P40508	320 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	AIM24	P47127	394 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	MIX17	Q03667	156 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	NAT3	Q06504	195 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	YDL218W	Q07629	317 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	YOR105W	Q08504	108 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	SMT3	Q12306	101 aa	Known RBP	3.09	□□□□□ -1.91
FAT1	YBR041W	RPS22B	Q3E7Y3	130 aa	Known RBP	3.09	□□□□□ -1.91
FAT1	YBR041W	YIL002W-A	Q3E7Z5	69 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	YIL134C-A	Q45U18	67 aa		3.09	□□□□□ -1.91
FAT1	YBR041W	YMR316C-A	I2HB70	103 aa		3.09	□□□□□ -1.92
FAT1	YBR041W	MRP10	O75012	95 aa		3.09	□□□□□ -1.92
FAT1	YBR041W	YGL010W	P25338	174 aa		3.09	□□□□□ -1.92
FAT1	YBR041W	YCR022C	P25620	114 aa		3.09	□□□□□ -1.92
FAT1	YBR041W	YIL163C	P40448	117 aa		3.09	□□□□□ -1.92
FAT1	YBR041W	FIT2	Q08906	153 aa		3.09	□□□□□ -1.92
FAT1	YBR041W	FYV7	Q12247	151 aa		3.09	□□□□□ -1.92
FAT1	YBR041W	ERG27	Q12452	347 aa	Known RBP	3.09	□□□□□ -1.92
FAT1	YBR041W	YOS1	Q3E834	85 aa		3.09	□□□□□ -1.92
FAT1	YBR041W	HTB1	P02293	131 aa	Known RBP	3.08	□□□□□ -1.92
FAT1	YBR041W	PMU1	P36069	295 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	MIX23	P38162	196 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	YBL071C	P38185	102 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	RPB11	P38902	120 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	YJL213W	P40896	331 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	LST8	P41318	303 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	MRX11	Q03079	207 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	IZH1	Q03419	316 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	YMR166C	Q03829	368 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	POS5	Q06892	414 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	SNA4	Q07549	140 aa		3.08	□□□□□ -1.92
FAT1	YBR041W	FUN14	P18411	198 aa		3.07	□□□□□ -1.92
FAT1	YBR041W	HSP12	P22943	109 aa	Known RBP	3.07	□□□□□ -1.92
FAT1	YBR041W	RPS2	P25443	254 aa	Known RBP	3.07	□□□□□ -1.92
FAT1	YBR041W	TCA17	P32613	152 aa		3.07	□□□□□ -1.92
FAT1	YBR041W	NNK1	P36003	928 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms