RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFA1	YAR007C	COQ5	P49017	307 aa		4.64	□□□□□ -1.67
RFA1	YAR007C	YNR061C	P53747	219 aa		4.64	□□□□□ -1.67
RFA1	YAR007C	ARC18	Q05933	178 aa	Known RBP	4.64	□□□□□ -1.67
RFA1	YAR007C	POS5	Q06892	414 aa		4.64	□□□□□ -1.67
RFA1	YAR007C	POM34	Q12445	299 aa		4.64	□□□□□ -1.67
RFA1	YAR007C	YPT1	P01123	206 aa	Known RBP	4.63	□□□□□ -1.67
RFA1	YAR007C	ATP10	P18496	279 aa		4.63	□□□□□ -1.67
RFA1	YAR007C	YNL200C	P40165	246 aa	Known RBP	4.63	□□□□□ -1.67
RFA1	YAR007C	SHR5	P41912	237 aa		4.63	□□□□□ -1.67
RFA1	YAR007C	CAB4	P53332	305 aa		4.63	□□□□□ -1.67
RFA1	YAR007C	YNR071C	P53757	342 aa		4.63	□□□□□ -1.67
RFA1	YAR007C	WSC2	P53832	503 aa		4.63	□□□□□ -1.67
RFA1	YAR007C	YOR292C	Q08743	309 aa		4.63	□□□□□ -1.67
RFA1	YAR007C	PRP46	Q12417	451 aa	Predicted RBP	4.63	□□□□□ -1.67
RFA1	YAR007C	RPP2A	P05319	106 aa	Known RBP	4.62	□□□□□ -1.67
RFA1	YAR007C	RPS2	P25443	254 aa	Known RBP	4.62	□□□□□ -1.67
RFA1	YAR007C	PCL7	P40186	285 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	PRM5	P40476	318 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	YGL118C	P53132	145 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	SWT21	P53873	357 aa	Predicted RBP	4.62	□□□□□ -1.67
RFA1	YAR007C	TDA7	P53882	636 aa	Predicted RBP	4.62	□□□□□ -1.67
RFA1	YAR007C	DIA1	P54005	336 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	RIM9	Q04734	239 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	SCW10	Q04951	389 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	RDL2	Q08742	149 aa	Known RBP	4.62	□□□□□ -1.67
RFA1	YAR007C	GRE1	Q08969	168 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	YDL180W	Q12301	547 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	Q0144	Q9ZZW2	109 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	BLM10	P43583	2143 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	YLR302C	O13544	120 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	ADH1	P00330	348 aa	Known RBP	4.62	□□□□□ -1.67
RFA1	YAR007C	COX1	P00401	534 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	HMRA1	P0CY11	126 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	NNK1	P36003	928 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	SRX1	P36077	127 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	ECM33	P38248	429 aa	Known RBP	4.62	□□□□□ -1.67
RFA1	YAR007C	UBS1	P38290	277 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	SHO1	P40073	367 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	CCS1	P40202	249 aa	Known RBP	4.62	□□□□□ -1.67
RFA1	YAR007C	SAS2	P40963	338 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	YJR015W	P47090	510 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	ARP3	P47117	449 aa	Known RBP	4.62	□□□□□ -1.67
RFA1	YAR007C	SDS23	P53172	527 aa		4.62	□□□□□ -1.67
RFA1	YAR007C	SAG1	P20840	650 aa		4.61	□□□□□ -1.67
RFA1	YAR007C	URK1	P27515	501 aa		4.61	□□□□□ -1.67
RFA1	YAR007C	RAD23	P32628	398 aa	Known RBP	4.61	□□□□□ -1.67
RFA1	YAR007C	MCH2	P36032	473 aa		4.61	□□□□□ -1.67
RFA1	YAR007C	SEC72	P39742	193 aa	Known RBP	4.61	□□□□□ -1.67
RFA1	YAR007C	OYE3	P41816	400 aa	Predicted RBP	4.61	□□□□□ -1.67
RFA1	YAR007C	BRP1	P53194	125 aa		4.61	□□□□□ -1.67
RFA1	YAR007C	YNR064C	P53750	290 aa		4.61	□□□□□ -1.67
RFA1	YAR007C	BOR1	P53838	576 aa		4.61	□□□□□ -1.67
RFA1	YAR007C	ATG4	P53867	494 aa		4.61	□□□□□ -1.67
RFA1	YAR007C	ECM18	Q04623	453 aa		4.61	□□□□□ -1.67
RFA1	YAR007C	BRR2	P32639	2163 aa	Known RBP	4.61	□□□□□ -1.67
RFA1	YAR007C	YFL068W	P0CX99	160 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	YLL066W-A	P0CY00	160 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	YLL067W-A	P0CY01	160 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	TIR1	P10863	254 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	DAL82	P21705	255 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	RML2	P32611	393 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	YPS6	P40583	537 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	YFL054C	P43549	646 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	COX18	P53239	316 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	POP3	P53833	195 aa	Predicted RBP	4.6	□□□□□ -1.67
RFA1	YAR007C	DYN2	Q02647	92 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	VPS71	Q03433	280 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	RPL7B	Q12213	244 aa	Known RBP	4.6	□□□□□ -1.67
RFA1	YAR007C	UTP23	Q12339	254 aa	Known RBP	4.6	□□□□□ -1.67
RFA1	YAR007C	MPD1	Q12404	318 aa	Known RBP	4.6	□□□□□ -1.67
RFA1	YAR007C	YMR316C-A	I2HB70	103 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	CDC43	P18898	376 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	MSN1	P22148	382 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	SOR1	P35497	357 aa	Known RBP	4.6	□□□□□ -1.67
RFA1	YAR007C	SNU13	P39990	126 aa	Known RBP	4.6	□□□□□ -1.67
RFA1	YAR007C	YER079W	P40052	210 aa	Known RBP	4.6	□□□□□ -1.67
RFA1	YAR007C	MIC27	P50945	234 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	YNL184C	P53876	108 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	DPP1	Q05521	289 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	SOR2	Q07786	357 aa		4.6	□□□□□ -1.67
RFA1	YAR007C	NIP7	Q08962	181 aa	Known RBP	4.6	□□□□□ -1.67
RFA1	YAR007C	NCE102	Q12207	173 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
RFA1	YAR007C	USB1	Q12208	290 aa	Known RBP	4.6	□□□□□ -1.67
RFA1	YAR007C	SEC16	P48415	2195 aa	Known RBP	4.6	□□□□□ -1.67
RFA1	YAR007C	MRS1	P07266	363 aa		4.59	□□□□□ -1.67
RFA1	YAR007C	RPL23A	P0CX41	137 aa	Known RBP	4.59	□□□□□ -1.67
RFA1	YAR007C	RPL23B	P0CX42	137 aa	Known RBP	4.59	□□□□□ -1.67
RFA1	YAR007C	MRS3	P10566	314 aa		4.59	□□□□□ -1.67
RFA1	YAR007C	HYP2	P23301	157 aa	Known RBP	4.59	□□□□□ -1.67
RFA1	YAR007C	NTC20	P38302	140 aa	Predicted RBP	4.59	□□□□□ -1.67
RFA1	YAR007C	HUA1	P40325	198 aa		4.59	□□□□□ -1.67
RFA1	YAR007C	MOB1	P40484	314 aa		4.59	□□□□□ -1.67
RFA1	YAR007C	YML079W	Q03629	201 aa		4.59	□□□□□ -1.67
RFA1	YAR007C	TRS23	Q03784	219 aa		4.59	□□□□□ -1.67
RFA1	YAR007C	YIL102C-A	Q2V2P5	75 aa		4.59	□□□□□ -1.67
RFA1	YAR007C	WIP1	Q2V2P8	89 aa		4.59	□□□□□ -1.67
RFA1	YAR007C	YOS1	Q3E834	85 aa		4.59	□□□□□ -1.67
RFA1	YAR007C	IMP1	P28627	190 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	YKL069W	P36088	180 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	YAR068W	P39564	161 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms