RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	APJ1	P53940	528 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	YKR005C	Q02203	525 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	VPS28	Q02767	242 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	YMR099C	Q03161	297 aa	Known RBP	3.14	□□□□□ -1.91
GEM1	YAL048C	LPP1	Q04396	274 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	YPL162C	Q12042	273 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	YPS3	Q12303	508 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	YFR032C-B	Q8TGU2	87 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	FKS1	P38631	1876 aa	Known RBP	3.14	□□□□□ -1.91
GEM1	YAL048C	TRP1	P00912	224 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	BGL2	P15703	313 aa	Known RBP	3.14	□□□□□ -1.91
GEM1	YAL048C	UTP30	P36144	274 aa	Known RBP	3.14	□□□□□ -1.91
GEM1	YAL048C	YKR070W	P36151	352 aa	Known RBP	3.14	□□□□□ -1.91
GEM1	YAL048C	PRM5	P40476	318 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	GVP36	P40531	326 aa	Known RBP	3.14	□□□□□ -1.91
GEM1	YAL048C	TDA4	P47153	279 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	YNL033W	P53964	284 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	YNL019C	P53975	284 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	GAS3	Q03655	524 aa		3.14	□□□□□ -1.91
GEM1	YAL048C	MOT1	P32333	1867 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	MYO1	P08964	1928 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	YGL041W-A	P0C5N3	154 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	SEC59	P20048	519 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	SPT14	P32363	452 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	RFS1	P38234	210 aa	Known RBP	3.13	□□□□□ -1.91
GEM1	YAL048C	RPF1	P38805	295 aa	Known RBP	3.13	□□□□□ -1.91
GEM1	YAL048C	YHR140W	P38842	239 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	YER189W	P40104	122 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	YIL012W	P40551	113 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	GPI2	P46961	280 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	YJR085C	P47131	105 aa	Known RBP	3.13	□□□□□ -1.91
GEM1	YAL048C	YGR015C	P53208	328 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	NHP10	Q03435	203 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	EMI1	Q04406	187 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	TIM22	Q12328	207 aa		3.13	□□□□□ -1.91
GEM1	YAL048C	ATP5	P09457	212 aa		3.12	□□□□□ -1.91
GEM1	YAL048C	ERG2	P32352	222 aa		3.12	□□□□□ -1.91
GEM1	YAL048C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
GEM1	YAL048C	RPL14A	P36105	138 aa	Known RBP	3.12	□□□□□ -1.91
GEM1	YAL048C	SHB17	P36136	271 aa	Known RBP	3.12	□□□□□ -1.91
GEM1	YAL048C	SHE1	P38200	338 aa		3.12	□□□□□ -1.91
GEM1	YAL048C	PHO89	P38361	574 aa		3.12	□□□□□ -1.91
GEM1	YAL048C	RPL14B	P38754	138 aa	Known RBP	3.12	□□□□□ -1.91
GEM1	YAL048C	PRE5	P40302	234 aa	Known RBP	3.12	□□□□□ -1.91
GEM1	YAL048C	CLD1	P53264	445 aa		3.12	□□□□□ -1.91
GEM1	YAL048C	NIP7	Q08962	181 aa	Known RBP	3.12	□□□□□ -1.91
GEM1	YAL048C	HTL1	Q9URQ5	78 aa		3.12	□□□□□ -1.91
GEM1	YAL048C	YLR179C	Q06252	201 aa	Known RBP	3.12	□□□□□ -1.91
GEM1	YAL048C	OCA6	Q12454	224 aa		3.12	□□□□□ -1.91
GEM1	YAL048C	RPB3	P16370	318 aa	Known RBP	3.11	□□□□□ -1.91
GEM1	YAL048C	ANB1	P19211	157 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	RPB5	P20434	215 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	ZRT3	P34240	503 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	NSG1	P38837	291 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	TIF34	P40217	347 aa	Known RBP	3.11	□□□□□ -1.91
GEM1	YAL048C	BNS1	P50084	137 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	SWT21	P53873	357 aa	Predicted RBP	3.11	□□□□□ -1.91
GEM1	YAL048C	NAT3	Q06504	195 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	YLR042C	Q07990	161 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	YDL211C	Q12121	372 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	MSB2	P32334	1306 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	AVT2	P39981	480 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	AVT6	P40074	448 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	YNL200C	P40165	246 aa	Known RBP	3.11	□□□□□ -1.91
GEM1	YAL048C	YGL262W	P53054	175 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	BUD25	P85052	153 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	RNH202	Q05635	350 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	PBA1	Q05778	276 aa		3.11	□□□□□ -1.91
GEM1	YAL048C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
GEM1	YAL048C	YLR462W	O13556	202 aa		3.1	□□□□□ -1.91
GEM1	YAL048C	YEL075C	P39972	122 aa		3.1	□□□□□ -1.91
GEM1	YAL048C	YNL208W	P40159	199 aa	Known RBP	3.1	□□□□□ -1.91
GEM1	YAL048C	YJL218W	P40892	196 aa	Known RBP	3.1	□□□□□ -1.91
GEM1	YAL048C	YJL028W	P47062	111 aa		3.1	□□□□□ -1.91
GEM1	YAL048C	SCW10	Q04951	389 aa		3.1	□□□□□ -1.91
GEM1	YAL048C	YOR020W-A	Q3E824	90 aa		3.1	□□□□□ -1.91
GEM1	YAL048C	RIF1	P29539	1916 aa		3.1	□□□□□ -1.91
GEM1	YAL048C	CCA1	P21269	546 aa		3.09	□□□□□ -1.91
GEM1	YAL048C	ETR1	P38071	380 aa		3.09	□□□□□ -1.91
GEM1	YAL048C	ATG18	P43601	500 aa		3.09	□□□□□ -1.91
GEM1	YAL048C	DIE2	P50076	525 aa		3.09	□□□□□ -1.91
GEM1	YAL048C	YGL230C	P53074	147 aa		3.09	□□□□□ -1.91
GEM1	YAL048C	YPL039W	Q03080	316 aa		3.09	□□□□□ -1.91
GEM1	YAL048C	HUT1	Q12520	339 aa		3.09	□□□□□ -1.91
GEM1	YAL048C	YLR412C-A	Q3E742	68 aa		3.09	□□□□□ -1.91
GEM1	YAL048C	YPR170W-B	P0C5R9	85 aa		3.09	□□□□□ -1.92
GEM1	YAL048C	CSE2	P33308	149 aa		3.09	□□□□□ -1.92
GEM1	YAL048C	YBL059W	P34224	193 aa		3.09	□□□□□ -1.92
GEM1	YAL048C	MSA2	P36157	363 aa		3.09	□□□□□ -1.92
GEM1	YAL048C	YFL019C	P43576	117 aa		3.09	□□□□□ -1.92
GEM1	YAL048C	MCP1	Q12106	302 aa		3.09	□□□□□ -1.92
GEM1	YAL048C	IZH2	Q12442	317 aa		3.09	□□□□□ -1.92
GEM1	YAL048C	SPT15	P13393	240 aa	Known RBP	3.08	□□□□□ -1.92
GEM1	YAL048C	BET1	P22804	142 aa		3.08	□□□□□ -1.92
GEM1	YAL048C	RNP1	P32385	249 aa		3.08	□□□□□ -1.92
GEM1	YAL048C	SDH3	P33421	198 aa		3.08	□□□□□ -1.92
GEM1	YAL048C	RPB11	P38902	120 aa		3.08	□□□□□ -1.92
GEM1	YAL048C	STB1	P42845	420 aa		3.08	□□□□□ -1.92
GEM1	YAL048C	CRH1	P53301	507 aa		3.08	□□□□□ -1.92
GEM1	YAL048C	SCP1	Q08873	200 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms