RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C YLR179CQ06252 201 aaKnown RBP10.73□□□□□ -0.69
SSA1YAL005C ARR3Q06598 404 aa10.73□□□□□ -0.69
SSA1YAL005C YOR015WQ12169 119 aa10.73□□□□□ -0.69
SSA1YAL005C RKI1Q12189 258 aa10.73□□□□□ -0.69
SSA1YAL005C TPT1Q12272 230 aaKnown RBP10.73□□□□□ -0.69
SSA1YAL005C YJR015WP47090 510 aa10.72□□□□□ -0.69
SSA1YAL005C YCL001W-AP87012 153 aa10.72□□□□□ -0.69
SSA1YAL005C CDC50P25656 391 aa10.72□□□□□ -0.69
SSA1YAL005C QDR3P38227 689 aa10.72□□□□□ -0.69
SSA1YAL005C FLO5P38894 1075 aa10.72□□□□□ -0.69
SSA1YAL005C POS5Q06892 414 aa10.72□□□□□ -0.69
SSA1YAL005C IRC23Q08416 157 aa10.72□□□□□ -0.69
SSA1YAL005C SPO13P23624 291 aa10.71□□□□□ -0.69
SSA1YAL005C AHT1P29589 182 aa10.71□□□□□ -0.69
SSA1YAL005C DUG3P53871 357 aa10.71□□□□□ -0.69
SSA1YAL005C RAD28Q12021 506 aa10.71□□□□□ -0.69
SSA1YAL005C POM33Q12164 279 aa10.71□□□□□ -0.69
SSA1YAL005C FEN2P25621 512 aaKnown RBP10.7□□□□□ -0.7
SSA1YAL005C UIP3P39547 235 aa10.7□□□□□ -0.7
SSA1YAL005C ODC1Q03028 310 aa10.7□□□□□ -0.7
SSA1YAL005C YML122CQ03207 126 aa10.7□□□□□ -0.7
SSA1YAL005C PBP4Q07362 185 aaKnown RBP10.7□□□□□ -0.7
SSA1YAL005C YPS1P32329 569 aa10.7□□□□□ -0.7
SSA1YAL005C YCR041WP37265 110 aa10.7□□□□□ -0.7
SSA1YAL005C SNN1P48232 102 aa10.7□□□□□ -0.7
SSA1YAL005C MRPL38P35996 138 aaPredicted RBP10.69□□□□□ -0.7
SSA1YAL005C YAR068WP39564 161 aa10.69□□□□□ -0.7
SSA1YAL005C GLO1P50107 326 aa10.69□□□□□ -0.7
SSA1YAL005C COX19Q3E731 98 aa10.69□□□□□ -0.7
SSA1YAL005C CDC7P06243 507 aa10.68□□□□□ -0.7
SSA1YAL005C RPS28BP0C0X0 67 aaKnown RBP10.68□□□□□ -0.7
SSA1YAL005C MIC12P38341 106 aa10.68□□□□□ -0.7
SSA1YAL005C CAF40P53829 373 aa10.68□□□□□ -0.7
SSA1YAL005C FMP41P53889 259 aaKnown RBP10.68□□□□□ -0.7
SSA1YAL005C RPS28AQ3E7X9 67 aaPredicted RBP10.68□□□□□ -0.7
SSA1YAL005C YMR316C-AI2HB70 103 aa10.68□□□□□ -0.7
SSA1YAL005C INO2P26798 304 aa10.68□□□□□ -0.7
SSA1YAL005C YBL071CP38185 102 aa10.68□□□□□ -0.7
SSA1YAL005C SHG1P38337 142 aa10.68□□□□□ -0.7
SSA1YAL005C YBR292CP38357 123 aa10.68□□□□□ -0.7
SSA1YAL005C GTT1P40582 234 aa10.68□□□□□ -0.7
SSA1YAL005C CTR3Q06686 241 aa10.68□□□□□ -0.7
SSA1YAL005C MSA1Q08471 629 aa10.68□□□□□ -0.7
SSA1YAL005C YBL059WP34224 193 aa10.67□□□□□ -0.7
SSA1YAL005C SPC25P40014 221 aa10.67□□□□□ -0.7
SSA1YAL005C BOR1P53838 576 aa10.67□□□□□ -0.7
SSA1YAL005C YMR007WQ03675 126 aa10.67□□□□□ -0.7
SSA1YAL005C COX2P00410 251 aa10.66□□□□□ -0.7
SSA1YAL005C PIS1P06197 220 aaKnown RBP10.66□□□□□ -0.7
SSA1YAL005C MRP2P10663 115 aaPredicted RBP10.66□□□□□ -0.7
SSA1YAL005C PRS4P38063 326 aaPredicted RBP10.66□□□□□ -0.7
SSA1YAL005C YNL194CP40169 301 aa10.66□□□□□ -0.7
SSA1YAL005C YGR018CP53211 109 aa10.66□□□□□ -0.7
SSA1YAL005C YCR022CP25620 114 aa10.66□□□□□ -0.7
SSA1YAL005C ECM25P32525 599 aa10.66□□□□□ -0.7
SSA1YAL005C SPG4Q04438 115 aa10.66□□□□□ -0.7
SSA1YAL005C RXT3Q07458 294 aa10.66□□□□□ -0.7
SSA1YAL005C YKL183C-AQ3E765 70 aa10.66□□□□□ -0.7
SSA1YAL005C QCR9P22289 66 aa10.65□□□□□ -0.7
SSA1YAL005C FPR2P32472 135 aa10.65□□□□□ -0.7
SSA1YAL005C CSH1P38287 376 aa10.65□□□□□ -0.7
SSA1YAL005C MIC27P50945 234 aa10.65□□□□□ -0.7
SSA1YAL005C SHH3Q04487 196 aa10.65□□□□□ -0.7
SSA1YAL005C AVO2Q04749 426 aa10.65□□□□□ -0.7
SSA1YAL005C SHB17P36136 271 aaKnown RBP10.64□□□□□ -0.71
SSA1YAL005C TMA23Q03525 211 aa10.64□□□□□ -0.71
SSA1YAL005C DPP1Q05521 289 aa10.64□□□□□ -0.71
SSA1YAL005C MSK1P32048 576 aa10.64□□□□□ -0.71
SSA1YAL005C LST7P53237 242 aa10.64□□□□□ -0.71
SSA1YAL005C YBR121C-AP0C5L4 52 aa10.63□□□□□ -0.71
SSA1YAL005C UGX2P32772 223 aa10.63□□□□□ -0.71
SSA1YAL005C DOG2P38773 246 aa10.63□□□□□ -0.71
SSA1YAL005C DOG1P38774 246 aa10.63□□□□□ -0.71
SSA1YAL005C YLR302CO13544 120 aa10.62□□□□□ -0.71
SSA1YAL005C VMA9Q3E7B6 73 aa10.62□□□□□ -0.71
SSA1YAL005C DFR1P07807 211 aaKnown RBP RIP-Chip data10.62□□□□□ -0.71not detected
SSA1YAL005C RPL14AP36105 138 aaKnown RBP10.62□□□□□ -0.71
SSA1YAL005C RPL14BP38754 138 aaKnown RBP10.62□□□□□ -0.71
SSA1YAL005C OXA1P39952 402 aa10.62□□□□□ -0.71
SSA1YAL005C YFR057WP43625 151 aa10.62□□□□□ -0.71
SSA1YAL005C TAX4P47030 604 aa10.62□□□□□ -0.71
SSA1YAL005C VPS55P47111 140 aa10.62□□□□□ -0.71
SSA1YAL005C MCM22P47167 239 aa10.62□□□□□ -0.71
SSA1YAL005C TY1A-DR3Q12441 440 aa10.62□□□□□ -0.71
SSA1YAL005C CUP2P15315 225 aa10.61□□□□□ -0.71
SSA1YAL005C AVT5P38176 459 aa10.61□□□□□ -0.71
SSA1YAL005C SWT21P53873 357 aaPredicted RBP10.61□□□□□ -0.71
SSA1YAL005C MSN1P22148 382 aa10.6□□□□□ -0.71
SSA1YAL005C YGR219WP53307 113 aa10.6□□□□□ -0.71
SSA1YAL005C DDI2P0CH63 225 aa10.6□□□□□ -0.71
SSA1YAL005C DDI3P0CH64 225 aa10.6□□□□□ -0.71
SSA1YAL005C RRT1P38192 103 aa10.6□□□□□ -0.71
SSA1YAL005C YMR181CQ03231 154 aa10.6□□□□□ -0.71
SSA1YAL005C YMR253CQ04835 414 aa10.6□□□□□ -0.71
SSA1YAL005C PHD1P36093 366 aa10.59□□□□□ -0.71
SSA1YAL005C SMD3P43321 101 aaKnown RBP10.59□□□□□ -0.71
SSA1YAL005C OCA2P53949 197 aa10.59□□□□□ -0.71
SSA1YAL005C GEP3Q08622 556 aa10.59□□□□□ -0.71
SSA1YAL005C Q0142Q9ZZW4 58 aa10.59□□□□□ -0.71
SSA1YAL005C DYN1P36022 4092 aa10.59□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms