RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 PI4K2BG5E9Z4 385 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 M0QZ92 97 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 MGEA5O60502 916 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 ERBB2P04626 1255 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 FGFR1P11362 822 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 LMO2P25791 158 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 ATICP31939 592 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 CTNNA1P35221 906 aaKnown RBP6.6□□□□□ -1.35
CLK1-210ENST00000473565 C1QBPQ07021 282 aaKnown RBP6.6□□□□□ -1.35
CLK1-210ENST00000473565 MYO1EQ12965 1108 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 TXNRD3NBQ6F5E7 133 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 PLEKHA7Q6IQ23 1121 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 DNAJC24Q6P3W2 148 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 NME8Q8N427 588 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 OR6B3Q8NGW1 331 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 PIWIL1Q96J94 861 aaKnown RBP6.6□□□□□ -1.35
CLK1-210ENST00000473565 RPS6KC1Q96S38 1066 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 HEMGNQ9BXL5 484 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 SENP6Q9GZR1 1112 aaPredicted RBP6.6□□□□□ -1.35
CLK1-210ENST00000473565 TRPV6Q9H1D0 765 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 MIOSQ9NXC5 875 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 BARX2Q9UMQ3 279 aaPredicted RBP6.6□□□□□ -1.35
CLK1-210ENST00000473565 NFU1Q9UMS0 254 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 L1RE1Q9UN81 338 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 GRAP2O75791 330 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 PROSCO94903 275 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 HMGCRP04035 888 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 INHAP05111 366 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 FAM153BP0C7A2 387 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 MYBL1P10243 752 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 RFC1P35251 1148 aaPredicted RBP6.6□□□□□ -1.35
CLK1-210ENST00000473565 KCNJ1P48048 391 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 APLP1P51693 650 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 YWHAEP62258 255 aaKnown RBP6.6□□□□□ -1.35
CLK1-210ENST00000473565 CASP8Q14790 479 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 SOWAHAQ2M3V2 549 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 FAM153CQ494X1 144 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 RAB6CQ53S08 254 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 PPP1R26Q5T8A7 1209 aaPredicted RBP6.6□□□□□ -1.35
CLK1-210ENST00000473565 CCDC70Q6NSX1 233 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 DCUN1D2Q6PH85 259 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 FEZF2Q8TBJ5 459 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 C18orf8Q96DM3 657 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 PAAF1Q9BRP4 392 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 RAB6CQ9H0N0 254 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 WNT8AQ9H1J5 351 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 DPH5Q9H2P9 285 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 SYNCQ9H7C4 482 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 VRTNQ9H8Y1 702 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 PLEKHA5Q9HAU0 1116 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 DDX20Q9UHI6 824 aaKnown RBP6.6□□□□□ -1.35
CLK1-210ENST00000473565 FAM153AQ9UHL3 310 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 TSPAN16Q9UKR8 245 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 PCDHGC3Q9UN70 934 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.6□□□□□ -1.35
CLK1-210ENST00000473565 NOD1Q9Y239 953 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 PCDHA3Q9Y5H8 950 aa6.6□□□□□ -1.35
CLK1-210ENST00000473565 TCRBV5S1A1TA0A578 114 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 MIF4GDA9UHW6 222 aaKnown RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 CES2O00748 559 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 KPNA6O60684 536 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 ERLIN1O75477 346 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 P4HA1P13674 534 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 CCDC130P13994 396 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 AXLP30530 894 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 ACLYP53396 1101 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 PSMC1P62191 440 aaKnown RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 ITGA7Q13683 1181 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 GOLGA7BQ2TAP0 167 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 PAN2Q504Q3 1202 aaKnown RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 SGO2Q562F6 1265 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 SEL1L2Q5TEA6 688 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 TTC27Q6P3X3 843 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 SND1Q7KZF4 910 aaKnown RBP eCLIP6.59□□□□□ -1.35
CLK1-210ENST00000473565 APBB1IPQ7Z5R6 666 aaPredicted RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 CD302Q8IX05 232 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 PRELID2Q8N945 189 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 SH3TC2Q8TF17 1288 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 ATG4AQ8WYN0 398 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 TRIM11Q96F44 468 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 NT5C1AQ9BXI3 368 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 FAM105AQ9NUU6 356 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 PARVAQ9NVD7 372 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 PCDH10Q9P2E7 1040 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 PADI3Q9ULW8 664 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 UBQLN1Q9UMX0 589 aaKnown RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 CEP83Q9Y592 693 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 TMEM191CA6NGB0 347 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 I3L4J1 428 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 ATP2C2O75185 946 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 LSM8O95777 96 aaKnown RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 PAEPP09466 180 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 RARAP10276 462 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 ACAT1P24752 427 aaKnown RBP6.59□□□□□ -1.35
CLK1-210ENST00000473565 ADORA2BP29275 332 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 GPD2P43304 727 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 SCNN1GP51170 649 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 RABGGTBP53611 331 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 RWDD2BP57060 319 aa6.59□□□□□ -1.35
CLK1-210ENST00000473565 TUBB4BP68371 445 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms