RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A ARR3Q06598 404 aa12.5□□□□□ -0.41
TRN1tP(UGG)A YOR015WQ12169 119 aa12.5□□□□□ -0.41
TRN1tP(UGG)A SYG1P40528 902 aa12.49□□□□□ -0.41
TRN1tP(UGG)A TAX4P47030 604 aa12.49□□□□□ -0.41
TRN1tP(UGG)A UBC12P52491 188 aa12.49□□□□□ -0.41
TRN1tP(UGG)A POS5Q06892 414 aa12.49□□□□□ -0.41
TRN1tP(UGG)A CDC50P25656 391 aa12.48□□□□□ -0.41
TRN1tP(UGG)A YBR292CP38357 123 aa12.48□□□□□ -0.41
TRN1tP(UGG)A YDL186WP48568 277 aa12.48□□□□□ -0.41
TRN1tP(UGG)A ADD37Q03233 198 aa12.48□□□□□ -0.41
TRN1tP(UGG)A ATP14Q12349 124 aa12.48□□□□□ -0.41
TRN1tP(UGG)A ZRC1P20107 442 aa12.47□□□□□ -0.41
TRN1tP(UGG)A AHT1P29589 182 aa12.47□□□□□ -0.41
TRN1tP(UGG)A YNK1P36010 153 aaKnown RBP12.47□□□□□ -0.41
TRN1tP(UGG)A YCL001W-AP87012 153 aa12.47□□□□□ -0.41
TRN1tP(UGG)A YML122CQ03207 126 aa12.47□□□□□ -0.41
TRN1tP(UGG)A CTR3Q06686 241 aa12.47□□□□□ -0.41
TRN1tP(UGG)A PIS1P06197 220 aaKnown RBP12.46□□□□□ -0.41
TRN1tP(UGG)A CDS1P38221 457 aa12.46□□□□□ -0.41
TRN1tP(UGG)A VPS55P47111 140 aa12.46□□□□□ -0.41
TRN1tP(UGG)A RXT3Q07458 294 aa12.46□□□□□ -0.41
TRN1tP(UGG)A YMR316C-AI2HB70 103 aa12.45□□□□□ -0.42
TRN1tP(UGG)A DOG2P38773 246 aa12.45□□□□□ -0.42
TRN1tP(UGG)A DOG1P38774 246 aa12.45□□□□□ -0.42
TRN1tP(UGG)A FLO5P38894 1075 aa12.45□□□□□ -0.42
TRN1tP(UGG)A BDH1P39714 382 aa12.45□□□□□ -0.42
TRN1tP(UGG)A CAF16P43569 289 aa12.45□□□□□ -0.42
TRN1tP(UGG)A MIC27P50945 234 aa12.45□□□□□ -0.42
TRN1tP(UGG)A YGR018CP53211 109 aa12.45□□□□□ -0.42
TRN1tP(UGG)A BOR1P53838 576 aa12.45□□□□□ -0.42
TRN1tP(UGG)A YMR007WQ03675 126 aa12.45□□□□□ -0.42
TRN1tP(UGG)A HOR7Q05827 59 aa12.45□□□□□ -0.42
TRN1tP(UGG)A QCR9P22289 66 aa12.44□□□□□ -0.42
TRN1tP(UGG)A YBL059WP34224 193 aa12.44□□□□□ -0.42
TRN1tP(UGG)A SHB17P36136 271 aaKnown RBP12.44□□□□□ -0.42
TRN1tP(UGG)A RRT1P38192 103 aa12.44□□□□□ -0.42
TRN1tP(UGG)A SHH3Q04487 196 aa12.44□□□□□ -0.42
TRN1tP(UGG)A YOR352WQ08816 343 aa12.44□□□□□ -0.42
TRN1tP(UGG)A PET494P07390 489 aaPredicted RBP12.43□□□□□ -0.42
TRN1tP(UGG)A YCR022CP25620 114 aa12.43□□□□□ -0.42
TRN1tP(UGG)A FPR2P32472 135 aa12.43□□□□□ -0.42
TRN1tP(UGG)A PTC7P38797 343 aa12.43□□□□□ -0.42
TRN1tP(UGG)A SIT1P39980 628 aa12.43□□□□□ -0.42
TRN1tP(UGG)A SNN1P48232 102 aa12.43□□□□□ -0.42
TRN1tP(UGG)A LST7P53237 242 aa12.43□□□□□ -0.42
TRN1tP(UGG)A COX19Q3E731 98 aa12.43□□□□□ -0.42
TRN1tP(UGG)A AVT5P38176 459 aa12.42□□□□□ -0.42
TRN1tP(UGG)A DYN1P36022 4092 aa12.42□□□□□ -0.42
TRN1tP(UGG)A DFR1P07807 211 aaKnown RBP RIP-Chip data12.41□□□□□ -0.42not detected
TRN1tP(UGG)A DER1P38307 211 aa12.41□□□□□ -0.42
TRN1tP(UGG)A SHG1P38337 142 aa12.41□□□□□ -0.42
TRN1tP(UGG)A SPC25P40014 221 aa12.41□□□□□ -0.42
TRN1tP(UGG)A TOS8P53147 276 aa12.41□□□□□ -0.42
TRN1tP(UGG)A CPD1P53314 239 aa12.41□□□□□ -0.42
TRN1tP(UGG)A SWT21P53873 357 aaPredicted RBP12.41□□□□□ -0.42
TRN1tP(UGG)A FMP41P53889 259 aaKnown RBP12.41□□□□□ -0.42
TRN1tP(UGG)A ERV25P54837 211 aaKnown RBP12.41□□□□□ -0.42
TRN1tP(UGG)A ODC1Q03028 310 aa12.41□□□□□ -0.42
TRN1tP(UGG)A YMR181CQ03231 154 aa12.41□□□□□ -0.42
TRN1tP(UGG)A CSH1P38287 376 aa12.4□□□□□ -0.42
TRN1tP(UGG)A RIB4P50861 169 aaPredicted RBP12.4□□□□□ -0.42
TRN1tP(UGG)A AVO2Q04749 426 aa12.4□□□□□ -0.42
TRN1tP(UGG)A FIP1P45976 327 aa12.39□□□□□ -0.43
TRN1tP(UGG)A YGR219WP53307 113 aa12.39□□□□□ -0.43
TRN1tP(UGG)A TMA23Q03525 211 aa12.39□□□□□ -0.43
TRN1tP(UGG)A CDC7P06243 507 aa12.38□□□□□ -0.43
TRN1tP(UGG)A YER190C-BP0CX94 160 aa12.38□□□□□ -0.43
TRN1tP(UGG)A YEL077W-AP0CX95 160 aa12.38□□□□□ -0.43
TRN1tP(UGG)A YGR296C-BP0CX96 160 aa12.38□□□□□ -0.43
TRN1tP(UGG)A YPL283W-BP0CX97 160 aa12.38□□□□□ -0.43
TRN1tP(UGG)A YPR204C-AP0CX98 160 aa12.38□□□□□ -0.43
TRN1tP(UGG)A YFL068WP0CX99 160 aa12.38□□□□□ -0.43
TRN1tP(UGG)A YLL066W-AP0CY00 160 aa12.38□□□□□ -0.43
TRN1tP(UGG)A YLL067W-AP0CY01 160 aa12.38□□□□□ -0.43
TRN1tP(UGG)A MSK1P32048 576 aa12.38□□□□□ -0.43
TRN1tP(UGG)A PRY2P36110 329 aa12.38□□□□□ -0.43
TRN1tP(UGG)A ATG27P46989 271 aa12.37□□□□□ -0.43
TRN1tP(UGG)A YKL102CP34249 101 aa12.36□□□□□ -0.43
TRN1tP(UGG)A MCM22P47167 239 aa12.36□□□□□ -0.43
TRN1tP(UGG)A GNP1P48813 663 aa12.36□□□□□ -0.43
TRN1tP(UGG)A CAB4P53332 305 aa12.36□□□□□ -0.43
TRN1tP(UGG)A CAF40P53829 373 aa12.36□□□□□ -0.43
TRN1tP(UGG)A SDH7Q04401 133 aa12.36□□□□□ -0.43
TRN1tP(UGG)A YGR035W-AQ45U48 73 aa12.36□□□□□ -0.43
TRN1tP(UGG)A SNU13P39990 126 aaKnown RBP12.35□□□□□ -0.43
TRN1tP(UGG)A SAS2P40963 338 aa12.35□□□□□ -0.43
TRN1tP(UGG)A SMD3P43321 101 aaKnown RBP12.35□□□□□ -0.43
TRN1tP(UGG)A SME1Q12330 94 aaPredicted RBP12.35□□□□□ -0.43
TRN1tP(UGG)A VMA9Q3E7B6 73 aa12.35□□□□□ -0.43
TRN1tP(UGG)A RPL14AP36105 138 aaKnown RBP12.34□□□□□ -0.43
TRN1tP(UGG)A RIB5P38145 238 aa12.34□□□□□ -0.43
TRN1tP(UGG)A IMD2P38697 523 aaKnown RBP12.34□□□□□ -0.43
TRN1tP(UGG)A RPL14BP38754 138 aaKnown RBP12.34□□□□□ -0.43
TRN1tP(UGG)A MRPL23Q12487 163 aaPredicted RBP12.34□□□□□ -0.43
TRN1tP(UGG)A POP5P28005 173 aa12.33□□□□□ -0.44
TRN1tP(UGG)A MIC12P38341 106 aa12.33□□□□□ -0.44
TRN1tP(UGG)A PET100P38958 111 aa12.33□□□□□ -0.44
TRN1tP(UGG)A SDO1Q07953 250 aaKnown RBP12.33□□□□□ -0.44
TRN1tP(UGG)A CYC3P06182 269 aa12.32□□□□□ -0.44
TRN1tP(UGG)A MRP2P10663 115 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms