RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 MGT1P26188 188 aa-3.91□□□□□ -3.04
snR53snR53 YEA6P39953 335 aa-3.91□□□□□ -3.04
snR53snR53 SPC25P40014 221 aa-3.91□□□□□ -3.04
snR53snR53 YOL014WQ08110 124 aa-3.91□□□□□ -3.04
snR53snR53 HYP2P23301 157 aaKnown RBP-3.92□□□□□ -3.04
snR53snR53 RTR1P40084 226 aaPredicted RBP-3.92□□□□□ -3.04
snR53snR53 YGR050CP53231 118 aa-3.92□□□□□ -3.04
snR53snR53 SPO19Q03029 223 aa-3.92□□□□□ -3.04
snR53snR53 DYN3Q04949 312 aa-3.92□□□□□ -3.04
snR53snR53 YDL157CQ12082 118 aa-3.92□□□□□ -3.04
snR53snR53 SSK22P25390 1331 aaPredicted RBP-3.93□□□□□ -3.04
snR53snR53 RPL33AP05744 107 aaKnown RBP-3.93□□□□□ -3.04
snR53snR53 RPA12P32529 125 aaKnown RBP-3.93□□□□□ -3.04
snR53snR53 RFC4P40339 323 aaKnown RBP-3.93□□□□□ -3.04
snR53snR53 MRPS12P53732 153 aa-3.93□□□□□ -3.04
snR53snR53 YHR214C-EQ8TGK0 99 aa-3.93□□□□□ -3.04
snR53snR53 MTW1P39731 289 aa-3.94□□□□□ -3.04
snR53snR53 YER134CP40081 178 aa-3.94□□□□□ -3.04
snR53snR53 TRM9P49957 279 aa-3.94□□□□□ -3.04
snR53snR53 RDI1Q12434 202 aa-3.94□□□□□ -3.04
snR53snR53 GCD2P12754 651 aaPredicted RBP-3.95□□□□□ -3.04
snR53snR53 TY1B-HO13535 1793 aa-3.95□□□□□ -3.04
snR53snR53 BMH2P34730 273 aaKnown RBP-3.96□□□□□ -3.04
snR53snR53 FAR7P43592 221 aa-3.96□□□□□ -3.04
snR53snR53 EMC4P53073 190 aa-3.96□□□□□ -3.04
snR53snR53 PNC1P53184 216 aaKnown RBP-3.96□□□□□ -3.04
snR53snR53 ERV41Q04651 352 aa-3.96□□□□□ -3.04
snR53snR53 FMP16Q12497 93 aa-3.96□□□□□ -3.04
snR53snR53 LOC1P43586 204 aaPredicted RBP-3.97□□□□□ -3.04
snR53snR53 MED4Q12343 284 aa-3.97□□□□□ -3.04
snR53snR53 CDC28P00546 298 aaKnown RBP-3.98□□□□□ -3.05
snR53snR53 RPS25BP0C0T4 108 aaKnown RBP-3.98□□□□□ -3.05
snR53snR53 NTG1P31378 399 aa-3.98□□□□□ -3.05
snR53snR53 VPS55P47111 140 aa-3.98□□□□□ -3.05
snR53snR53 RPS25AQ3E792 108 aaPredicted RBP-3.98□□□□□ -3.05
snR53snR53 YEL014CP39999 101 aa-3.99□□□□□ -3.05
snR53snR53 GLC8P41818 229 aa-3.99□□□□□ -3.05
snR53snR53 KAP95Q06142 861 aaKnown RBP-3.99□□□□□ -3.05
snR53snR53 CSM4Q08955 156 aa-3.99□□□□□ -3.05
snR53snR53 DAS2Q12084 232 aa-3.99□□□□□ -3.05
snR53snR53 CMC4Q3E7A9 73 aa-3.99□□□□□ -3.05
snR53snR53 UBR1P19812 1950 aa-4□□□□□ -3.05
snR53snR53 SPT14P32363 452 aa-4□□□□□ -3.05
snR53snR53 HSP150P32478 413 aa-4□□□□□ -3.05
snR53snR53 YNG1Q08465 219 aa-4.01□□□□□ -3.05
snR53snR53 GCY1P14065 312 aaKnown RBP RIP-Chip data-4.02□□□□□ -3.05not detected
snR53snR53 YRA2P36036 203 aaKnown RBP RIP-Chip data-4.02□□□□□ -3.05not detected
snR53snR53 YBR013CP38215 129 aa-4.02□□□□□ -3.05
snR53snR53 AIM2P39721 246 aa-4.02□□□□□ -3.05
snR53snR53 OSW5P40219 148 aa-4.02□□□□□ -3.05
snR53snR53 COG5P53951 403 aa-4.02□□□□□ -3.05
snR53snR53 RIM9Q04734 239 aa-4.02□□□□□ -3.05
snR53snR53 NMA1Q06178 401 aaKnown RBP-4.02□□□□□ -3.05
snR53snR53 COX2P00410 251 aa-4.03□□□□□ -3.05
snR53snR53 URA6P15700 204 aa-4.03□□□□□ -3.05
snR53snR53 GRX5Q02784 150 aa-4.03□□□□□ -3.05
snR53snR53 MAG1P22134 296 aaKnown RBP-4.04□□□□□ -3.06
snR53snR53 RRT1P38192 103 aa-4.04□□□□□ -3.06
snR53snR53 GAL83Q04739 417 aa-4.04□□□□□ -3.06
snR53snR53 BCY1P07278 416 aaKnown RBP-4.05□□□□□ -3.06
snR53snR53 MIC27P50945 234 aa-4.05□□□□□ -3.06
snR53snR53 ATP20Q12233 115 aa-4.05□□□□□ -3.06
snR53snR53 YML100W-AQ8TGT0 57 aa-4.05□□□□□ -3.06
snR53snR53 SAC3P46674 1301 aa-4.05□□□□□ -3.06
snR53snR53 TY4B-JP47024 1803 aa-4.05□□□□□ -3.06
snR53snR53 YPR117WQ06116 2489 aa-4.05□□□□□ -3.06
snR53snR53 YRF1-3P0CX14 1859 aa-4.06□□□□□ -3.06
snR53snR53 YRF1-7P0CX15 1859 aa-4.06□□□□□ -3.06
snR53snR53 ERG10P41338 398 aaKnown RBP-4.06□□□□□ -3.06
snR53snR53 DIE2P50076 525 aa-4.06□□□□□ -3.06
snR53snR53 YOR381W-AQ3E804 55 aa-4.06□□□□□ -3.06
snR53snR53 SUA7P29055 345 aaPredicted RBP-4.07□□□□□ -3.06
snR53snR53 YCR087C-AP37263 153 aa-4.07□□□□□ -3.06
snR53snR53 MIC12P38341 106 aa-4.07□□□□□ -3.06
snR53snR53 YHR173CP38864 112 aa-4.07□□□□□ -3.06
snR53snR53 SEC4P07560 215 aaKnown RBP-4.08□□□□□ -3.06
snR53snR53 MRPL31P14063 131 aaPredicted RBP-4.08□□□□□ -3.06
snR53snR53 PEX34P25584 144 aa-4.08□□□□□ -3.06
snR53snR53 SRL3P36167 246 aa-4.08□□□□□ -3.06
snR53snR53 SBH1P52870 82 aa-4.08□□□□□ -3.06
snR53snR53 RPL25P04456 142 aaKnown RBP-4.09□□□□□ -3.06
snR53snR53 YCR016WP25617 290 aaKnown RBP-4.09□□□□□ -3.06
snR53snR53 NTF2P33331 125 aaKnown RBP-4.09□□□□□ -3.06
snR53snR53 YML079WQ03629 201 aa-4.09□□□□□ -3.06
snR53snR53 YMR122CQ03879 124 aa-4.09□□□□□ -3.06
snR53snR53 COX20Q04935 205 aa-4.09□□□□□ -3.06
snR53snR53 YBR072C-AQ3E794 53 aa-4.09□□□□□ -3.06
snR53snR53 SPT3P06844 337 aa-4.1□□□□□ -3.07
snR53snR53 YGL014C-AP0C5N1 53 aa-4.1□□□□□ -3.07
snR53snR53 ARL3Q02804 198 aa-4.1□□□□□ -3.07
snR53snR53 RAD51P25454 400 aa-4.11□□□□□ -3.07
snR53snR53 NSA2P40078 261 aaKnown RBP-4.11□□□□□ -3.07
snR53snR53 YPR127WQ06494 345 aa-4.11□□□□□ -3.07
snR53snR53 SDO1Q07953 250 aaKnown RBP-4.11□□□□□ -3.07
snR53snR53 CUE1P38428 203 aa-4.12□□□□□ -3.07
snR53snR53 SRP14P38985 146 aa-4.12□□□□□ -3.07
snR53snR53 HMF1P40037 129 aaKnown RBP-4.12□□□□□ -3.07
snR53snR53 SKI6P46948 246 aaPredicted RBP-4.12□□□□□ -3.07
snR53snR53 ICS3P47034 131 aa-4.12□□□□□ -3.07
snR53snR53 HOC1P47124 396 aa-4.12□□□□□ -3.07
Retrieved 100 of 5,963 RNA–protein pairs in 100.6 ms