RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 RKI1Q12189 258 aa2.49□□□□□ -2.01
snR42snR42 ATG5Q12380 294 aa2.49□□□□□ -2.01
snR42snR42 QCR2P07257 368 aa2.48□□□□□ -2.01
snR42snR42 SPS2P08459 502 aa2.48□□□□□ -2.01
snR42snR42 ERV1P27882 189 aa2.48□□□□□ -2.01
snR42snR42 MRP17P28778 131 aa2.48□□□□□ -2.01
snR42snR42 SUA5P32579 426 aa2.48□□□□□ -2.01
snR42snR42 MRPL3P36516 390 aa2.48□□□□□ -2.01
snR42snR42 ECM33P38248 429 aaKnown RBP2.48□□□□□ -2.01
snR42snR42 IMD2P38697 523 aaKnown RBP2.48□□□□□ -2.01
snR42snR42 NSA2P40078 261 aaKnown RBP2.48□□□□□ -2.01
snR42snR42 YIR035CP40579 254 aa2.48□□□□□ -2.01
snR42snR42 ARP3P47117 449 aaKnown RBP2.48□□□□□ -2.01
snR42snR42 TPN1P53099 579 aa2.48□□□□□ -2.01
snR42snR42 ACT1P60010 375 aaKnown RBP2.48□□□□□ -2.01
snR42snR42 GRH1Q04410 372 aaKnown RBP2.48□□□□□ -2.01
snR42snR42 ORM2Q06144 216 aa2.48□□□□□ -2.01
snR42snR42 YCT1Q12235 531 aa2.48□□□□□ -2.01
snR42snR42 PAA1Q12447 191 aaKnown RBP2.48□□□□□ -2.01
snR42snR42 YGL258W-AQ3E740 77 aa2.48□□□□□ -2.01
snR42snR42 TPI1P00942 248 aaKnown RBP2.47□□□□□ -2.01
snR42snR42 PET494P07390 489 aaPredicted RBP2.47□□□□□ -2.01
snR42snR42 UTR5P32630 166 aa2.47□□□□□ -2.01
snR42snR42 YBL071CP38185 102 aa2.47□□□□□ -2.01
snR42snR42 RRT1P38192 103 aa2.47□□□□□ -2.01
snR42snR42 YBR242WP38331 238 aa2.47□□□□□ -2.01
snR42snR42 RRF1P38771 230 aa2.47□□□□□ -2.01
snR42snR42 DOG2P38773 246 aa2.47□□□□□ -2.01
snR42snR42 DOG1P38774 246 aa2.47□□□□□ -2.01
snR42snR42 YAR068WP39564 161 aa2.47□□□□□ -2.01
snR42snR42 AIM20P40451 204 aa2.47□□□□□ -2.01
snR42snR42 DFG10P40526 253 aa2.47□□□□□ -2.01
snR42snR42 SYG1P40528 902 aa2.47□□□□□ -2.01
snR42snR42 YGR210CP42942 411 aa2.47□□□□□ -2.01
snR42snR42 YPI1P43587 155 aa2.47□□□□□ -2.01
snR42snR42 ECM27P47144 725 aa2.47□□□□□ -2.01
snR42snR42 PKP2P53170 491 aa2.47□□□□□ -2.01
snR42snR42 CAX4P53223 239 aa2.47□□□□□ -2.01
snR42snR42 YNR071CP53757 342 aa2.47□□□□□ -2.01
snR42snR42 SWT21P53873 357 aaPredicted RBP2.47□□□□□ -2.01
snR42snR42 YHP1Q04116 353 aa2.47□□□□□ -2.01
snR42snR42 PEX10Q05568 337 aa2.47□□□□□ -2.01
snR42snR42 PHO92Q06390 306 aa2.47□□□□□ -2.01
snR42snR42 RAD28Q12021 506 aa2.47□□□□□ -2.01
snR42snR42 POM34Q12445 299 aa2.47□□□□□ -2.01
snR42snR42 YBR255C-AQ3E776 120 aa2.47□□□□□ -2.01
snR42snR42 SEC22P22214 214 aa2.46□□□□□ -2.02
snR42snR42 YCR016WP25617 290 aaKnown RBP2.46□□□□□ -2.02
snR42snR42 YRA2P36036 203 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
snR42snR42 CDS1P38221 457 aa2.46□□□□□ -2.02
snR42snR42 QDR3P38227 689 aa2.46□□□□□ -2.02
snR42snR42 WSS1P38838 269 aa2.46□□□□□ -2.02
snR42snR42 SNU13P39990 126 aaKnown RBP2.46□□□□□ -2.02
snR42snR42 RPL13BP40212 199 aaKnown RBP2.46□□□□□ -2.02
snR42snR42 YKE4P40544 346 aa2.46□□□□□ -2.02
snR42snR42 SRB7P47822 140 aa2.46□□□□□ -2.02
snR42snR42 NIF3P53081 288 aa2.46□□□□□ -2.02
snR42snR42 ARO8P53090 500 aaKnown RBP2.46□□□□□ -2.02
snR42snR42 YGR050CP53231 118 aa2.46□□□□□ -2.02
snR42snR42 MSO1P53604 210 aaKnown RBP2.46□□□□□ -2.02
snR42snR42 EST3Q03096 181 aa2.46□□□□□ -2.02
snR42snR42 YMR090WQ04304 227 aaKnown RBP2.46□□□□□ -2.02
snR42snR42 YLR281CQ05863 155 aa2.46□□□□□ -2.02
snR42snR42 AIM45Q12480 344 aaKnown RBP2.46□□□□□ -2.02
snR42snR42 RPL13AQ12690 199 aaPredicted RBP2.46□□□□□ -2.02
snR42snR42 YLR146W-AQ2V2P1 62 aa2.46□□□□□ -2.02
snR42snR42 SOD1P00445 154 aaKnown RBP2.45□□□□□ -2.02
snR42snR42 ARG80P07249 177 aa2.45□□□□□ -2.02
snR42snR42 DFR1P07807 211 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
snR42snR42 MRS3P10566 314 aa2.45□□□□□ -2.02
snR42snR42 NHP6BP11633 99 aaKnown RBP2.45□□□□□ -2.02
snR42snR42 FCY2P17064 533 aa2.45□□□□□ -2.02
snR42snR42 TIP1P27654 210 aaPredicted RBP2.45□□□□□ -2.02
snR42snR42 ALK2P32789 676 aaPredicted RBP2.45□□□□□ -2.02
snR42snR42 NPL6P32832 435 aa2.45□□□□□ -2.02
snR42snR42 PDC2P32896 925 aa2.45□□□□□ -2.02
snR42snR42 YKL162CP36052 402 aa2.45□□□□□ -2.02
snR42snR42 SDH4P37298 181 aa2.45□□□□□ -2.02
snR42snR42 AVT5P38176 459 aa2.45□□□□□ -2.02
snR42snR42 MIC12P38341 106 aa2.45□□□□□ -2.02
snR42snR42 MPC2P38857 129 aa2.45□□□□□ -2.02
snR42snR42 MST28P39552 234 aa2.45□□□□□ -2.02
snR42snR42 YNL194CP40169 301 aa2.45□□□□□ -2.02
snR42snR42 DUO1P53168 247 aaKnown RBP2.45□□□□□ -2.02
snR42snR42 MST27P53176 234 aa2.45□□□□□ -2.02
snR42snR42 YGR219WP53307 113 aa2.45□□□□□ -2.02
snR42snR42 OCA2P53949 197 aa2.45□□□□□ -2.02
snR42snR42 GPI15P53961 229 aa2.45□□□□□ -2.02
snR42snR42 DID2P69771 204 aa2.45□□□□□ -2.02
snR42snR42 YDR274CP87283 123 aa2.45□□□□□ -2.02
snR42snR42 DCS1Q06151 350 aa2.45□□□□□ -2.02
snR42snR42 POS5Q06892 414 aa2.45□□□□□ -2.02
snR42snR42 RRT7Q07829 113 aa2.45□□□□□ -2.02
snR42snR42 CYC3P06182 269 aa2.44□□□□□ -2.02
snR42snR42 RPS25BP0C0T4 108 aaKnown RBP2.44□□□□□ -2.02
snR42snR42 YER137CP40083 148 aaKnown RBP2.44□□□□□ -2.02
snR42snR42 POR2P40478 281 aa2.44□□□□□ -2.02
snR42snR42 AGX1P43567 385 aa2.44□□□□□ -2.02
snR42snR42 ALG13P53178 202 aa2.44□□□□□ -2.02
snR42snR42 PDR17P53844 350 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms