RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C PDR17P53844 350 aa3.88□□□□□ -1.79
GDE1YPL110C SDC1Q03323 175 aa3.88□□□□□ -1.79
GDE1YPL110C RPL7BQ12213 244 aaKnown RBP3.88□□□□□ -1.79
GDE1YPL110C ADH1P00330 348 aaKnown RBP3.88□□□□□ -1.79
GDE1YPL110C OPI3P05375 206 aa3.88□□□□□ -1.79
GDE1YPL110C RPL40AP0CH08 128 aaKnown RBP3.88□□□□□ -1.79
GDE1YPL110C RPL40BP0CH09 128 aaKnown RBP3.88□□□□□ -1.79
GDE1YPL110C SPS18P32572 300 aa3.88□□□□□ -1.79
GDE1YPL110C VEL1P53058 206 aa3.88□□□□□ -1.79
GDE1YPL110C YDR209CQ03480 137 aa3.88□□□□□ -1.79
GDE1YPL110C VHS2P40463 436 aa3.87□□□□□ -1.79
GDE1YPL110C PFS2P42841 465 aaKnown RBP3.87□□□□□ -1.79
GDE1YPL110C OST2P46964 130 aa3.87□□□□□ -1.79
GDE1YPL110C UBP8P50102 471 aa3.87□□□□□ -1.79
GDE1YPL110C BUD9P53226 547 aa3.87□□□□□ -1.79
GDE1YPL110C CDC14Q00684 551 aa3.87□□□□□ -1.79
GDE1YPL110C RLM1Q12224 676 aa3.87□□□□□ -1.79
GDE1YPL110C PRS5Q12265 496 aaKnown RBP3.87□□□□□ -1.79
GDE1YPL110C JID1Q12350 301 aa3.87□□□□□ -1.79
GDE1YPL110C MRPL20P22354 195 aaPredicted RBP3.87□□□□□ -1.79
GDE1YPL110C RPA12P32529 125 aaKnown RBP3.87□□□□□ -1.79
GDE1YPL110C UMP1P38293 148 aa3.87□□□□□ -1.79
GDE1YPL110C YGP1P38616 354 aaKnown RBP3.87□□□□□ -1.79
GDE1YPL110C ELO1P39540 310 aa3.87□□□□□ -1.79
GDE1YPL110C SPO73P40031 143 aa3.87□□□□□ -1.79
GDE1YPL110C YIL059CP40520 121 aa3.87□□□□□ -1.79
GDE1YPL110C HMS2P47175 358 aa3.87□□□□□ -1.79
GDE1YPL110C YGR219WP53307 113 aa3.87□□□□□ -1.79
GDE1YPL110C YKR041WP36134 250 aa3.86□□□□□ -1.79
GDE1YPL110C YMC2P38087 329 aa3.86□□□□□ -1.79
GDE1YPL110C RTC2P38279 296 aa3.86□□□□□ -1.79
GDE1YPL110C HSP10P38910 106 aa3.86□□□□□ -1.79
GDE1YPL110C TEM1P38987 245 aa3.86□□□□□ -1.79
GDE1YPL110C YFR045WP43617 309 aa3.86□□□□□ -1.79
GDE1YPL110C COF1Q03048 143 aaKnown RBP3.86□□□□□ -1.79
GDE1YPL110C YMR320WQ04897 101 aa3.86□□□□□ -1.79
GDE1YPL110C COQ11Q05892 277 aa3.86□□□□□ -1.79
GDE1YPL110C YIL102C-AQ2V2P5 75 aa3.86□□□□□ -1.79
GDE1YPL110C SPO24Q3E752 67 aa3.86□□□□□ -1.79
GDE1YPL110C COX5AP00424 153 aa3.86□□□□□ -1.79
GDE1YPL110C CHO1P08456 276 aa3.86□□□□□ -1.79
GDE1YPL110C PEX2P32800 271 aa3.86□□□□□ -1.79
GDE1YPL110C YHR138CP38841 114 aaPredicted RBP3.86□□□□□ -1.79
GDE1YPL110C YIR016WP40572 265 aa3.86□□□□□ -1.79
GDE1YPL110C EGT2P42835 1041 aa3.86□□□□□ -1.79
GDE1YPL110C PGA1P53896 198 aa3.86□□□□□ -1.79
GDE1YPL110C MRX11Q03079 207 aa3.86□□□□□ -1.79
GDE1YPL110C YMR090WQ04304 227 aaKnown RBP3.86□□□□□ -1.79
GDE1YPL110C ASM4Q05166 528 aa3.86□□□□□ -1.79
GDE1YPL110C KEI1Q06346 221 aa3.86□□□□□ -1.79
GDE1YPL110C DFM1Q12743 341 aaKnown RBP3.86□□□□□ -1.79
GDE1YPL110C YCR099CP25657 155 aa3.86□□□□□ -1.79
GDE1YPL110C PRE2P30656 287 aaKnown RBP3.86□□□□□ -1.79
GDE1YPL110C UTP15Q04305 513 aaKnown RBP3.86□□□□□ -1.79
GDE1YPL110C ZPS1Q12512 249 aa3.86□□□□□ -1.79
GDE1YPL110C YNL277W-AQ3E7Z0 62 aa3.86□□□□□ -1.79
GDE1YPL110C MSB2P32334 1306 aa3.86□□□□□ -1.79
GDE1YPL110C RPB7P34087 171 aa3.85□□□□□ -1.79
GDE1YPL110C HMF1P40037 129 aaKnown RBP3.85□□□□□ -1.79
GDE1YPL110C NRG1Q03125 231 aa3.85□□□□□ -1.79
GDE1YPL110C YMR310CQ04867 317 aaPredicted RBP3.85□□□□□ -1.79
GDE1YPL110C ARC18Q05933 178 aaKnown RBP3.85□□□□□ -1.79
GDE1YPL110C RPL18AP0CX49 186 aaKnown RBP3.85□□□□□ -1.79
GDE1YPL110C RPL18BP0CX50 186 aaKnown RBP3.85□□□□□ -1.79
GDE1YPL110C AIM25P47140 327 aa3.85□□□□□ -1.79
GDE1YPL110C YPL162CQ12042 273 aa3.85□□□□□ -1.79
GDE1YPL110C ATG41Q12048 136 aa3.85□□□□□ -1.79
GDE1YPL110C FIT3Q08907 204 aa3.85□□□□□ -1.79
GDE1YPL110C FMP49A0A023PZB3 126 aa3.84□□□□□ -1.79
GDE1YPL110C MID2P36027 376 aa3.84□□□□□ -1.79
GDE1YPL110C ARP3P47117 449 aaKnown RBP3.84□□□□□ -1.79
GDE1YPL110C YPR098CQ06089 161 aa3.84□□□□□ -1.79
GDE1YPL110C YOR097CQ12274 175 aaPredicted RBP3.84□□□□□ -1.79
GDE1YPL110C MHF2Q3E829 80 aa3.84□□□□□ -1.79
GDE1YPL110C YBR063CP38083 404 aa3.84□□□□□ -1.79
GDE1YPL110C SDS24P38314 527 aa3.84□□□□□ -1.79
GDE1YPL110C RPS13P05756 151 aaKnown RBP3.84□□□□□ -1.8
GDE1YPL110C MRS1P07266 363 aa3.84□□□□□ -1.8
GDE1YPL110C SRP21P32342 167 aa3.84□□□□□ -1.8
GDE1YPL110C REC114P32841 428 aa3.84□□□□□ -1.8
GDE1YPL110C SDH3P33421 198 aa3.84□□□□□ -1.8
GDE1YPL110C PRM8P53174 237 aa3.84□□□□□ -1.8
GDE1YPL110C YMR317WQ04893 1140 aa3.84□□□□□ -1.8
GDE1YPL110C NAT3Q06504 195 aa3.84□□□□□ -1.8
GDE1YPL110C UTP23Q12339 254 aaKnown RBP3.84□□□□□ -1.8
GDE1YPL110C ICT1Q12385 394 aa3.84□□□□□ -1.8
GDE1YPL110C YLR363W-AQ3E747 85 aa3.84□□□□□ -1.8
GDE1YPL110C YKL018C-AQ3E7A7 99 aa3.84□□□□□ -1.8
GDE1YPL110C YIH1P25637 258 aa3.83□□□□□ -1.8
GDE1YPL110C YKR070WP36151 352 aaKnown RBP3.83□□□□□ -1.8
GDE1YPL110C HTD2P38790 280 aaKnown RBP3.83□□□□□ -1.8
GDE1YPL110C SFT1P43682 97 aa3.83□□□□□ -1.8
GDE1YPL110C LYS5P50113 272 aa3.83□□□□□ -1.8
GDE1YPL110C YGL262WP53054 175 aa3.83□□□□□ -1.8
GDE1YPL110C EMC4P53073 190 aa3.83□□□□□ -1.8
GDE1YPL110C ALG9P53868 555 aaKnown RBP3.83□□□□□ -1.8
GDE1YPL110C YML053CQ04978 212 aa3.83□□□□□ -1.8
GDE1YPL110C IGO2Q9P305 131 aa3.83□□□□□ -1.8
GDE1YPL110C TFS1P14306 219 aa3.83□□□□□ -1.8
GDE1YPL110C XBP1P40489 647 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms