RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W YGR042WP53227 271 aa2.99□□□□□ -1.93
RET3YPL010W FYV6P53913 173 aa2.99□□□□□ -1.93
RET3YPL010W VBA1Q04301 562 aa2.99□□□□□ -1.93
RET3YPL010W RDS3Q06835 107 aaPredicted RBP2.99□□□□□ -1.93
RET3YPL010W UBA3Q99344 299 aa2.99□□□□□ -1.93
RET3YPL010W PET494P07390 489 aaPredicted RBP2.98□□□□□ -1.93
RET3YPL010W TRR1P29509 319 aaKnown RBP2.98□□□□□ -1.93
RET3YPL010W LAG1P38703 411 aa2.98□□□□□ -1.93
RET3YPL010W LSM12P38828 187 aaKnown RBP2.98□□□□□ -1.93
RET3YPL010W ARO8P53090 500 aaKnown RBP2.98□□□□□ -1.93
RET3YPL010W SWT21P53873 357 aaPredicted RBP2.98□□□□□ -1.93
RET3YPL010W YML018CQ03730 393 aa2.98□□□□□ -1.93
RET3YPL010W ERP1Q05359 219 aaKnown RBP2.98□□□□□ -1.93
RET3YPL010W IRC23Q08416 157 aa2.98□□□□□ -1.93
RET3YPL010W CYC3P06182 269 aa2.97□□□□□ -1.93
RET3YPL010W SEN2P16658 377 aa2.97□□□□□ -1.93
RET3YPL010W PHD1P36093 366 aa2.97□□□□□ -1.93
RET3YPL010W FMP23P38231 175 aa2.97□□□□□ -1.93
RET3YPL010W DOG2P38773 246 aa2.97□□□□□ -1.93
RET3YPL010W DOG1P38774 246 aa2.97□□□□□ -1.93
RET3YPL010W TDA4P47153 279 aa2.97□□□□□ -1.93
RET3YPL010W PKP2P53170 491 aa2.97□□□□□ -1.93
RET3YPL010W RCF1Q03713 159 aa2.97□□□□□ -1.93
RET3YPL010W PAM18Q07914 168 aa2.97□□□□□ -1.93
RET3YPL010W YLR031WQ07978 186 aa2.97□□□□□ -1.93
RET3YPL010W HUG1Q6Q5K6 68 aa2.97□□□□□ -1.93
RET3YPL010W TAR1Q8TGM6 124 aa2.97□□□□□ -1.93
RET3YPL010W HOM6P31116 359 aaKnown RBP2.96□□□□□ -1.94
RET3YPL010W AGA2P32781 87 aa2.96□□□□□ -1.94
RET3YPL010W AIM20P40451 204 aa2.96□□□□□ -1.94
RET3YPL010W SIM1P40472 476 aa2.96□□□□□ -1.94
RET3YPL010W POR2P40478 281 aa2.96□□□□□ -1.94
RET3YPL010W OTU1P43558 301 aa2.96□□□□□ -1.94
RET3YPL010W IRC18P47056 224 aa2.96□□□□□ -1.94
RET3YPL010W ATG39Q06159 398 aa2.96□□□□□ -1.94
RET3YPL010W SCP1Q08873 200 aa2.96□□□□□ -1.94
RET3YPL010W ATG41Q12048 136 aa2.96□□□□□ -1.94
RET3YPL010W YGL258W-AQ3E740 77 aa2.96□□□□□ -1.94
RET3YPL010W MIR1P23641 311 aaKnown RBP2.95□□□□□ -1.94
RET3YPL010W RRT1P38192 103 aa2.95□□□□□ -1.94
RET3YPL010W RTC3P38804 111 aaPredicted RBP2.95□□□□□ -1.94
RET3YPL010W BFR1P38934 470 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
RET3YPL010W SNF11P38956 169 aa2.95□□□□□ -1.94
RET3YPL010W YAR068WP39564 161 aa2.95□□□□□ -1.94
RET3YPL010W GAT4P40569 121 aa2.95□□□□□ -1.94
RET3YPL010W RBL2P48606 106 aaKnown RBP2.95□□□□□ -1.94
RET3YPL010W HAL1Q01766 294 aa2.95□□□□□ -1.94
RET3YPL010W KEI1Q06346 221 aa2.95□□□□□ -1.94
RET3YPL010W DCP1Q12517 231 aaPredicted RBP2.95□□□□□ -1.94
RET3YPL010W SOD1P00445 154 aaKnown RBP2.94□□□□□ -1.94
RET3YPL010W ZRC1P20107 442 aa2.94□□□□□ -1.94
RET3YPL010W RPL24BP24000 155 aaKnown RBP2.94□□□□□ -1.94
RET3YPL010W ECM25P32525 599 aa2.94□□□□□ -1.94
RET3YPL010W UPS2P35200 230 aa2.94□□□□□ -1.94
RET3YPL010W MRPL4P36517 319 aa2.94□□□□□ -1.94
RET3YPL010W GOS1P38736 223 aa2.94□□□□□ -1.94
RET3YPL010W HTD2P38790 280 aaKnown RBP2.94□□□□□ -1.94
RET3YPL010W ARP3P47117 449 aaKnown RBP2.94□□□□□ -1.94
RET3YPL010W MIC26P50087 233 aa2.94□□□□□ -1.94
RET3YPL010W OCA2P53949 197 aa2.94□□□□□ -1.94
RET3YPL010W SGF11Q03067 99 aa2.94□□□□□ -1.94
RET3YPL010W ADD37Q03233 198 aa2.94□□□□□ -1.94
RET3YPL010W LDS2Q08218 356 aa2.94□□□□□ -1.94
RET3YPL010W ERG27Q12452 347 aaKnown RBP2.94□□□□□ -1.94
RET3YPL010W AGC1Q12482 902 aa2.94□□□□□ -1.94
RET3YPL010W NKP1Q12493 238 aa2.94□□□□□ -1.94
RET3YPL010W SUS1Q6WNK7 96 aa2.94□□□□□ -1.94
RET3YPL010W PET20Q99373 253 aa2.94□□□□□ -1.94
RET3YPL010W CPR4P25334 318 aa2.93□□□□□ -1.94
RET3YPL010W POP5P28005 173 aa2.93□□□□□ -1.94
RET3YPL010W RNP1P32385 249 aa2.93□□□□□ -1.94
RET3YPL010W VMA22P38784 181 aa2.93□□□□□ -1.94
RET3YPL010W UIP3P39547 235 aa2.93□□□□□ -1.94
RET3YPL010W MST28P39552 234 aa2.93□□□□□ -1.94
RET3YPL010W NSA2P40078 261 aaKnown RBP2.93□□□□□ -1.94
RET3YPL010W MST27P53176 234 aa2.93□□□□□ -1.94
RET3YPL010W EST3Q03096 181 aa2.93□□□□□ -1.94
RET3YPL010W MRPL35Q06678 367 aa2.93□□□□□ -1.94
RET3YPL010W TIM18Q08749 192 aa2.93□□□□□ -1.94
RET3YPL010W FEX1Q08913 375 aa2.93□□□□□ -1.94
RET3YPL010W FEX2Q08991 375 aa2.93□□□□□ -1.94
RET3YPL010W YPR013CQ12145 317 aa2.93□□□□□ -1.94
RET3YPL010W CAP2P13517 287 aa2.92□□□□□ -1.94
RET3YPL010W MRPL27P36526 146 aaPredicted RBP2.92□□□□□ -1.94
RET3YPL010W YBL071CP38185 102 aa2.92□□□□□ -1.94
RET3YPL010W COS8P38723 381 aa2.92□□□□□ -1.94
RET3YPL010W RPR2P40571 144 aa2.92□□□□□ -1.94
RET3YPL010W CAT5P41735 233 aa2.92□□□□□ -1.94
RET3YPL010W LSM1P47017 172 aaKnown RBP2.92□□□□□ -1.94
RET3YPL010W THI74Q04083 370 aa2.92□□□□□ -1.94
RET3YPL010W VAM10Q08474 114 aa2.92□□□□□ -1.94
RET3YPL010W YOR283WQ12040 230 aaKnown RBP2.92□□□□□ -1.94
RET3YPL010W YPL162CQ12042 273 aa2.92□□□□□ -1.94
RET3YPL010W PAA1Q12447 191 aaKnown RBP2.92□□□□□ -1.94
RET3YPL010W FPR2P32472 135 aa2.91□□□□□ -1.94
RET3YPL010W FMT1P32785 401 aa2.91□□□□□ -1.94
RET3YPL010W ERV15P38312 142 aa2.91□□□□□ -1.94
RET3YPL010W GPI2P46961 280 aa2.91□□□□□ -1.94
RET3YPL010W SNX4P47057 423 aa2.91□□□□□ -1.94
RET3YPL010W SPO19Q03029 223 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 77 ms