RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W HUA1P40325 198 aa3.1□□□□□ -1.91
ROD1YOR018W YGR269WP40326 108 aa3.1□□□□□ -1.91
ROD1YOR018W PRM5P40476 318 aa3.1□□□□□ -1.91
ROD1YOR018W YJL118WP47022 219 aa3.1□□□□□ -1.91
ROD1YOR018W MCM22P47167 239 aa3.1□□□□□ -1.91
ROD1YOR018W NDE2Q07500 545 aa3.1□□□□□ -1.91
ROD1YOR018W YDL242WQ07746 117 aa3.1□□□□□ -1.91
ROD1YOR018W FCF2Q12035 217 aaPredicted RBP3.1□□□□□ -1.91
ROD1YOR018W JID1Q12350 301 aa3.1□□□□□ -1.91
ROD1YOR018W SOD1P00445 154 aaKnown RBP3.1□□□□□ -1.91
ROD1YOR018W HTB1P02293 131 aaKnown RBP3.1□□□□□ -1.91
ROD1YOR018W LSB5P25369 354 aa3.1□□□□□ -1.91
ROD1YOR018W IES6P32617 166 aa3.1□□□□□ -1.91
ROD1YOR018W GPI18P38211 433 aa3.1□□□□□ -1.91
ROD1YOR018W SLM6P38343 150 aa3.1□□□□□ -1.91
ROD1YOR018W RTC3P38804 111 aaPredicted RBP3.1□□□□□ -1.91
ROD1YOR018W EMC5P40540 141 aa3.1□□□□□ -1.91
ROD1YOR018W RPL9BP51401 191 aaKnown RBP3.1□□□□□ -1.91
ROD1YOR018W YGL114WP53134 725 aa3.1□□□□□ -1.91
ROD1YOR018W PDR17P53844 350 aa3.1□□□□□ -1.91
ROD1YOR018W YMR181CQ03231 154 aa3.1□□□□□ -1.91
ROD1YOR018W DCS1Q06151 350 aa3.1□□□□□ -1.91
ROD1YOR018W YOR352WQ08816 343 aa3.1□□□□□ -1.91
ROD1YOR018W DYN1P36022 4092 aa3.09□□□□□ -1.91
ROD1YOR018W RPS25BP0C0T4 108 aaKnown RBP3.09□□□□□ -1.91
ROD1YOR018W YCL042WP25572 119 aa3.09□□□□□ -1.91
ROD1YOR018W SIP1P32578 815 aa3.09□□□□□ -1.91
ROD1YOR018W YEA4P40004 342 aa3.09□□□□□ -1.91
ROD1YOR018W COX15P40086 486 aa3.09□□□□□ -1.91
ROD1YOR018W CTR3Q06686 241 aa3.09□□□□□ -1.91
ROD1YOR018W POS5Q06892 414 aa3.09□□□□□ -1.91
ROD1YOR018W YPL264CQ08980 353 aa3.09□□□□□ -1.91
ROD1YOR018W RPS25AQ3E792 108 aaPredicted RBP3.09□□□□□ -1.91
ROD1YOR018W VPS63O13549 108 aa3.09□□□□□ -1.92
ROD1YOR018W SHB17P36136 271 aaKnown RBP3.09□□□□□ -1.92
ROD1YOR018W YPT10P38146 199 aa3.09□□□□□ -1.92
ROD1YOR018W YHR138CP38841 114 aaPredicted RBP3.09□□□□□ -1.92
ROD1YOR018W PSD1P39006 500 aa3.09□□□□□ -1.92
ROD1YOR018W YJR015WP47090 510 aa3.09□□□□□ -1.92
ROD1YOR018W YAP1802P53309 568 aa3.09□□□□□ -1.92
ROD1YOR018W FMP41P53889 259 aaKnown RBP3.09□□□□□ -1.92
ROD1YOR018W SNO1Q03144 224 aa3.09□□□□□ -1.92
ROD1YOR018W YMR007WQ03675 126 aa3.09□□□□□ -1.92
ROD1YOR018W YMR317WQ04893 1140 aa3.09□□□□□ -1.92
ROD1YOR018W SDO1Q07953 250 aaKnown RBP3.09□□□□□ -1.92
ROD1YOR018W YMR31P19955 123 aa3.08□□□□□ -1.92
ROD1YOR018W SOR1P35497 357 aaKnown RBP3.08□□□□□ -1.92
ROD1YOR018W YPT31P38555 223 aaKnown RBP3.08□□□□□ -1.92
ROD1YOR018W SNU13P39990 126 aaKnown RBP3.08□□□□□ -1.92
ROD1YOR018W UBC12P52491 188 aa3.08□□□□□ -1.92
ROD1YOR018W YML122CQ03207 126 aa3.08□□□□□ -1.92
ROD1YOR018W PRP11Q07350 266 aaPredicted RBP3.08□□□□□ -1.92
ROD1YOR018W SOR2Q07786 357 aa3.08□□□□□ -1.92
ROD1YOR018W HRD1Q08109 551 aa3.08□□□□□ -1.92
ROD1YOR018W AGC1Q12482 902 aa3.08□□□□□ -1.92
ROD1YOR018W VMA9Q3E7B6 73 aa3.08□□□□□ -1.92
ROD1YOR018W AHT1P29589 182 aa3.08□□□□□ -1.92
ROD1YOR018W YPS1P32329 569 aa3.08□□□□□ -1.92
ROD1YOR018W RPS0AP32905 252 aaKnown RBP3.08□□□□□ -1.92
ROD1YOR018W CBT1P36038 271 aaPredicted RBP3.08□□□□□ -1.92
ROD1YOR018W AVO2Q04749 426 aa3.08□□□□□ -1.92
ROD1YOR018W SPS18P32572 300 aa3.07□□□□□ -1.92
ROD1YOR018W YCR041WP37265 110 aa3.07□□□□□ -1.92
ROD1YOR018W YAR068WP39564 161 aa3.07□□□□□ -1.92
ROD1YOR018W LST8P41318 303 aa3.07□□□□□ -1.92
ROD1YOR018W YGR025WP53216 100 aa3.07□□□□□ -1.92
ROD1YOR018W FRQ1Q06389 190 aa3.07□□□□□ -1.92
ROD1YOR018W PBP4Q07362 185 aaKnown RBP3.07□□□□□ -1.92
ROD1YOR018W COX19Q3E731 98 aa3.07□□□□□ -1.92
ROD1YOR018W YHR213W-AQ8TGT4 77 aa3.07□□□□□ -1.92
ROD1YOR018W APA2P22108 325 aa3.07□□□□□ -1.92
ROD1YOR018W ELF1P36053 145 aa3.07□□□□□ -1.92
ROD1YOR018W QDR3P38227 689 aa3.07□□□□□ -1.92
ROD1YOR018W NSA2P40078 261 aaKnown RBP3.07□□□□□ -1.92
ROD1YOR018W STD1Q02794 444 aa3.07□□□□□ -1.92
ROD1YOR018W YOL029CQ08187 201 aa3.07□□□□□ -1.92
ROD1YOR018W ZRC1P20107 442 aa3.06□□□□□ -1.92
ROD1YOR018W YBL059WP34224 193 aa3.06□□□□□ -1.92
ROD1YOR018W DSK2P48510 373 aa3.06□□□□□ -1.92
ROD1YOR018W YCL001W-AP87012 153 aa3.06□□□□□ -1.92
ROD1YOR018W YMR253CQ04835 414 aa3.06□□□□□ -1.92
ROD1YOR018W ADH6Q04894 360 aaKnown RBP3.06□□□□□ -1.92
ROD1YOR018W ERV2Q12284 196 aa3.06□□□□□ -1.92
ROD1YOR018W ISN1Q99312 450 aa3.06□□□□□ -1.92
ROD1YOR018W MSK1P32048 576 aa3.05□□□□□ -1.92
ROD1YOR018W ECM31P38122 312 aa3.05□□□□□ -1.92
ROD1YOR018W YBR090CP38253 122 aa3.05□□□□□ -1.92
ROD1YOR018W DER1P38307 211 aa3.05□□□□□ -1.92
ROD1YOR018W YHL044WP38727 235 aa3.05□□□□□ -1.92
ROD1YOR018W NOP16P40007 231 aaKnown RBP3.05□□□□□ -1.92
ROD1YOR018W ATG27P46989 271 aa3.05□□□□□ -1.92
ROD1YOR018W YNR066CP53752 436 aa3.05□□□□□ -1.92
ROD1YOR018W PAA1Q12447 191 aaKnown RBP3.05□□□□□ -1.92
ROD1YOR018W YGL258W-AQ3E740 77 aa3.05□□□□□ -1.92
ROD1YOR018W PCC1Q3E833 88 aa3.05□□□□□ -1.92
ROD1YOR018W YCR022CP25620 114 aa3.05□□□□□ -1.92
ROD1YOR018W LSM2P38203 95 aaKnown RBP3.05□□□□□ -1.92
ROD1YOR018W TRS20P38334 175 aa3.05□□□□□ -1.92
ROD1YOR018W IMD2P38697 523 aaKnown RBP3.05□□□□□ -1.92
ROD1YOR018W GLE2P40066 365 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms