RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C SEI1Q06058 285 aa8.15□□□□□ -1.11
SPT20YOL148C IRC13Q08630 104 aa8.15□□□□□ -1.11
SPT20YOL148C Q0144Q9ZZW2 109 aa8.15□□□□□ -1.11
SPT20YOL148C FLO9P39712 1322 aa8.14□□□□□ -1.11
SPT20YOL148C YPT1P01123 206 aaKnown RBP8.14□□□□□ -1.11
SPT20YOL148C FCY2P17064 533 aa8.14□□□□□ -1.11
SPT20YOL148C EMP70P32802 667 aa8.14□□□□□ -1.11
SPT20YOL148C YBR220CP38318 560 aa8.14□□□□□ -1.11
SPT20YOL148C YBR255C-AQ3E776 120 aa8.14□□□□□ -1.11
SPT20YOL148C HOG1P32485 435 aa8.13□□□□□ -1.11
SPT20YOL148C LYS1P38998 373 aaRIP-Chip data8.13□□□□□ -1.11not detected
SPT20YOL148C ATF1P40353 525 aa8.13□□□□□ -1.11
SPT20YOL148C YGL118CP53132 145 aa8.13□□□□□ -1.11
SPT20YOL148C YGR126WP53274 230 aa8.13□□□□□ -1.11
SPT20YOL148C YML079WQ03629 201 aa8.13□□□□□ -1.11
SPT20YOL148C MRL1Q06815 381 aa8.13□□□□□ -1.11
SPT20YOL148C MSI1P13712 422 aa8.13□□□□□ -1.11
SPT20YOL148C YUH1P35127 236 aa8.13□□□□□ -1.11
SPT20YOL148C PFS1P38872 237 aa8.13□□□□□ -1.11
SPT20YOL148C GEP7P53171 287 aa8.13□□□□□ -1.11
SPT20YOL148C YHM2Q04013 314 aa8.13□□□□□ -1.11
SPT20YOL148C LPP1Q04396 274 aa8.13□□□□□ -1.11
SPT20YOL148C GRH1Q04410 372 aaKnown RBP8.13□□□□□ -1.11
SPT20YOL148C YOR186WQ08560 144 aa8.13□□□□□ -1.11
SPT20YOL148C PIN2Q12057 282 aa8.13□□□□□ -1.11
SPT20YOL148C USV1Q12132 391 aa8.13□□□□□ -1.11
SPT20YOL148C SCS22Q6Q595 175 aa8.13□□□□□ -1.11
SPT20YOL148C CYC7P00045 113 aa8.12□□□□□ -1.11
SPT20YOL148C HMRA1P0CY11 126 aa8.12□□□□□ -1.11
SPT20YOL148C RPL30P14120 105 aaKnown RBP8.12□□□□□ -1.11
SPT20YOL148C YKR070WP36151 352 aaKnown RBP8.12□□□□□ -1.11
SPT20YOL148C DER1P38307 211 aa8.12□□□□□ -1.11
SPT20YOL148C SEC24P40482 926 aaKnown RBP8.12□□□□□ -1.11
SPT20YOL148C YIP5P53108 310 aa8.12□□□□□ -1.11
SPT20YOL148C YGR050CP53231 118 aa8.12□□□□□ -1.11
SPT20YOL148C YNR048WP53740 393 aa8.12□□□□□ -1.11
SPT20YOL148C RKI1Q12189 258 aa8.12□□□□□ -1.11
SPT20YOL148C ATO3Q12359 275 aa8.12□□□□□ -1.11
SPT20YOL148C CUP2P15315 225 aa8.11□□□□□ -1.11
SPT20YOL148C PCL1P24867 279 aa8.11□□□□□ -1.11
SPT20YOL148C YKL107WP34251 309 aa8.11□□□□□ -1.11
SPT20YOL148C YIL163CP40448 117 aa8.11□□□□□ -1.11
SPT20YOL148C YNR061CP53747 219 aa8.11□□□□□ -1.11
SPT20YOL148C YLR460CP54007 376 aa8.11□□□□□ -1.11
SPT20YOL148C RIM9Q04734 239 aa8.11□□□□□ -1.11
SPT20YOL148C YDR344CQ05510 147 aa8.11□□□□□ -1.11
SPT20YOL148C OPI10Q08202 246 aa8.11□□□□□ -1.11
SPT20YOL148C RPL7BQ12213 244 aaKnown RBP8.11□□□□□ -1.11
SPT20YOL148C GEP5Q12393 293 aa8.11□□□□□ -1.11
SPT20YOL148C SEC4P07560 215 aaKnown RBP8.1□□□□□ -1.11
SPT20YOL148C PHD1P36093 366 aa8.1□□□□□ -1.11
SPT20YOL148C HNT2P49775 206 aa8.1□□□□□ -1.11
SPT20YOL148C CPD1P53314 239 aa8.1□□□□□ -1.11
SPT20YOL148C LEE1Q02799 301 aaKnown RBP8.1□□□□□ -1.11
SPT20YOL148C HRD1Q08109 551 aa8.1□□□□□ -1.11
SPT20YOL148C YSF3P0C074 85 aaPredicted RBP8.1□□□□□ -1.11
SPT20YOL148C YFL068WP0CX99 160 aa8.1□□□□□ -1.11
SPT20YOL148C YLL066W-AP0CY00 160 aa8.1□□□□□ -1.11
SPT20YOL148C YLL067W-AP0CY01 160 aa8.1□□□□□ -1.11
SPT20YOL148C FPR1P20081 114 aaKnown RBP8.1□□□□□ -1.11
SPT20YOL148C PSD1P39006 500 aa8.1□□□□□ -1.11
SPT20YOL148C ARP3P47117 449 aaKnown RBP8.1□□□□□ -1.11
SPT20YOL148C YFH1Q07540 174 aa8.1□□□□□ -1.11
SPT20YOL148C QRI5P32344 111 aa8.09□□□□□ -1.11
SPT20YOL148C RAD23P32628 398 aaKnown RBP8.09□□□□□ -1.11
SPT20YOL148C YNL198CP40166 100 aa8.09□□□□□ -1.11
SPT20YOL148C TDA4P47153 279 aa8.09□□□□□ -1.11
SPT20YOL148C MIC27P50945 234 aa8.09□□□□□ -1.11
SPT20YOL148C CAB4P53332 305 aa8.09□□□□□ -1.11
SPT20YOL148C YDR102CQ03864 110 aa8.09□□□□□ -1.11
SPT20YOL148C YPR098CQ06089 161 aa8.09□□□□□ -1.11
SPT20YOL148C ARF1P11076 181 aaKnown RBP8.08□□□□□ -1.12
SPT20YOL148C ZRT1P32804 376 aa8.08□□□□□ -1.12
SPT20YOL148C SWD3P38123 315 aa8.08□□□□□ -1.12
SPT20YOL148C SEC72P39742 193 aaKnown RBP8.08□□□□□ -1.12
SPT20YOL148C CCS1P40202 249 aaKnown RBP8.08□□□□□ -1.12
SPT20YOL148C SHR5P41912 237 aa8.08□□□□□ -1.12
SPT20YOL148C YNR014WP53719 212 aa8.08□□□□□ -1.12
SPT20YOL148C NAG1Q8TGN9 163 aa8.08□□□□□ -1.12
SPT20YOL148C TAD3Q9URQ3 322 aa8.08□□□□□ -1.12
SPT20YOL148C TIR1P10863 254 aa8.08□□□□□ -1.12
SPT20YOL148C ECM33P38248 429 aaKnown RBP8.08□□□□□ -1.12
SPT20YOL148C YPS6P40583 537 aa8.08□□□□□ -1.12
SPT20YOL148C YOR292CQ08743 309 aa8.08□□□□□ -1.12
SPT20YOL148C SWT1Q12104 458 aa8.08□□□□□ -1.12
SPT20YOL148C NNK1P36003 928 aa8.07□□□□□ -1.12
SPT20YOL148C MED6P38782 295 aa8.07□□□□□ -1.12
SPT20YOL148C YIL012WP40551 113 aa8.07□□□□□ -1.12
SPT20YOL148C SCW10Q04951 389 aa8.07□□□□□ -1.12
SPT20YOL148C USB1Q12208 290 aaKnown RBP8.07□□□□□ -1.12
SPT20YOL148C FEN2P25621 512 aaKnown RBP8.06□□□□□ -1.12
SPT20YOL148C DAL80P26343 269 aa8.06□□□□□ -1.12
SPT20YOL148C PRM5P40476 318 aa8.06□□□□□ -1.12
SPT20YOL148C SPG5P42933 373 aa8.06□□□□□ -1.12
SPT20YOL148C COX18P53239 316 aa8.06□□□□□ -1.12
SPT20YOL148C DIC1Q06143 298 aa8.06□□□□□ -1.12
SPT20YOL148C HNT3Q08702 217 aa8.06□□□□□ -1.12
SPT20YOL148C YRA1Q12159 226 aaKnown RBP8.06□□□□□ -1.12
SPT20YOL148C YAL064W-BO13512 126 aa8.06□□□□□ -1.12
SPT20YOL148C HYP2P23301 157 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms