RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W TY1A-ML2P0CX76 440 aa4.85□□□□□ -1.63
ATG4YNL223W YHL044WP38727 235 aa4.85□□□□□ -1.63
ATG4YNL223W GZF3P42944 551 aaKnown RBP4.85□□□□□ -1.63
ATG4YNL223W YGR045CP53229 120 aa4.85□□□□□ -1.63
ATG4YNL223W SSU72P53538 206 aaPredicted RBP4.85□□□□□ -1.63
ATG4YNL223W YMR007WQ03675 126 aa4.85□□□□□ -1.63
ATG4YNL223W AVO2Q04749 426 aa4.85□□□□□ -1.63
ATG4YNL223W ADH6Q04894 360 aaKnown RBP4.85□□□□□ -1.63
ATG4YNL223W DAL4Q04895 635 aa4.85□□□□□ -1.63
ATG4YNL223W TY1A-GR1Q12085 440 aa4.85□□□□□ -1.63
ATG4YNL223W RDL1Q12305 139 aaKnown RBP4.85□□□□□ -1.63
ATG4YNL223W ATO3Q12359 275 aa4.85□□□□□ -1.63
ATG4YNL223W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.85□□□□□ -1.63
ATG4YNL223W TY1A-OLQ92392 440 aaKnown RBP4.85□□□□□ -1.63
ATG4YNL223W MRP2P10663 115 aaPredicted RBP4.84□□□□□ -1.63
ATG4YNL223W HEM13P11353 328 aaKnown RBP4.84□□□□□ -1.63
ATG4YNL223W YKR045CP36138 183 aa4.84□□□□□ -1.63
ATG4YNL223W YJR015WP47090 510 aa4.84□□□□□ -1.63
ATG4YNL223W HHO1P53551 258 aa4.84□□□□□ -1.63
ATG4YNL223W BOR1P53838 576 aa4.84□□□□□ -1.63
ATG4YNL223W YNL234WP53857 426 aa4.84□□□□□ -1.63
ATG4YNL223W CTR3Q06686 241 aa4.84□□□□□ -1.63
ATG4YNL223W CSI2Q08054 341 aa4.84□□□□□ -1.63
ATG4YNL223W SME1Q12330 94 aaPredicted RBP4.84□□□□□ -1.63
ATG4YNL223W SPO24Q3E752 67 aa4.84□□□□□ -1.63
ATG4YNL223W PRP8P33334 2413 aaKnown RBP4.84□□□□□ -1.63
ATG4YNL223W ADE8P04161 214 aa4.83□□□□□ -1.64
ATG4YNL223W PAU1P0CE88 120 aa4.83□□□□□ -1.64
ATG4YNL223W PAU14P0CE89 120 aa4.83□□□□□ -1.64
ATG4YNL223W PAU6P0CE90 120 aa4.83□□□□□ -1.64
ATG4YNL223W PAU18P0CE91 120 aa4.83□□□□□ -1.64
ATG4YNL223W PAU8P0CE92 120 aa4.83□□□□□ -1.64
ATG4YNL223W PAU11P0CE93 120 aa4.83□□□□□ -1.64
ATG4YNL223W BGL2P15703 313 aaKnown RBP4.83□□□□□ -1.64
ATG4YNL223W QDR3P38227 689 aa4.83□□□□□ -1.64
ATG4YNL223W PAU13P38725 120 aa4.83□□□□□ -1.64
ATG4YNL223W YAP1802P53309 568 aa4.83□□□□□ -1.64
ATG4YNL223W PAU10Q03050 120 aa4.83□□□□□ -1.64
ATG4YNL223W YHP1Q04116 353 aa4.83□□□□□ -1.64
ATG4YNL223W PAU20Q08322 120 aa4.83□□□□□ -1.64
ATG4YNL223W YPR145C-AQ2V2P0 78 aa4.83□□□□□ -1.64
ATG4YNL223W PAU9Q3E770 120 aa4.83□□□□□ -1.64
ATG4YNL223W Q0297Q9ZZV8 51 aa4.83□□□□□ -1.64
ATG4YNL223W SOD1P00445 154 aaKnown RBP4.82□□□□□ -1.64
ATG4YNL223W TOM40P23644 387 aaKnown RBP4.82□□□□□ -1.64
ATG4YNL223W FPR2P32472 135 aa4.82□□□□□ -1.64
ATG4YNL223W ALK2P32789 676 aaPredicted RBP4.82□□□□□ -1.64
ATG4YNL223W VMA11P32842 164 aa4.82□□□□□ -1.64
ATG4YNL223W DER1P38307 211 aa4.82□□□□□ -1.64
ATG4YNL223W PGD1P40356 397 aa4.82□□□□□ -1.64
ATG4YNL223W PHS1P40857 217 aa4.82□□□□□ -1.64
ATG4YNL223W YJL213WP40896 331 aa4.82□□□□□ -1.64
ATG4YNL223W RTS2P40962 232 aa4.82□□□□□ -1.64
ATG4YNL223W LST8P41318 303 aa4.82□□□□□ -1.64
ATG4YNL223W BNS1P50084 137 aa4.82□□□□□ -1.64
ATG4YNL223W MIC27P50945 234 aa4.82□□□□□ -1.64
ATG4YNL223W YIP1P53039 248 aa4.82□□□□□ -1.64
ATG4YNL223W TIM21P53220 239 aa4.82□□□□□ -1.64
ATG4YNL223W YGR151CP53287 111 aa4.82□□□□□ -1.64
ATG4YNL223W SHH3Q04487 196 aa4.82□□□□□ -1.64
ATG4YNL223W POS5Q06892 414 aa4.82□□□□□ -1.64
ATG4YNL223W ERV2Q12284 196 aa4.82□□□□□ -1.64
ATG4YNL223W YMR316C-AI2HB70 103 aa4.81□□□□□ -1.64
ATG4YNL223W ADH3P07246 375 aaKnown RBP4.81□□□□□ -1.64
ATG4YNL223W SEC59P20048 519 aa4.81□□□□□ -1.64
ATG4YNL223W LAC1P28496 418 aa4.81□□□□□ -1.64
ATG4YNL223W NTF2P33331 125 aaKnown RBP4.81□□□□□ -1.64
ATG4YNL223W ATG8P38182 117 aaRIP-Chip data4.81□□□□□ -1.64not detected
ATG4YNL223W YAR068WP39564 161 aa4.81□□□□□ -1.64
ATG4YNL223W NOP16P40007 231 aaKnown RBP4.81□□□□□ -1.64
ATG4YNL223W LOC1P43586 204 aaPredicted RBP4.81□□□□□ -1.64
ATG4YNL223W TAX4P47030 604 aa4.81□□□□□ -1.64
ATG4YNL223W HAM1P47119 197 aaKnown RBP4.81□□□□□ -1.64
ATG4YNL223W ABM1P47146 123 aa4.81□□□□□ -1.64
ATG4YNL223W LRS4Q04087 347 aaKnown RBP4.81□□□□□ -1.64
ATG4YNL223W TMA10Q06177 86 aa4.81□□□□□ -1.64
ATG4YNL223W FCY1Q12178 158 aa4.81□□□□□ -1.64
ATG4YNL223W PIS1P06197 220 aaKnown RBP4.81□□□□□ -1.64
ATG4YNL223W MLF3P32047 452 aa4.81□□□□□ -1.64
ATG4YNL223W ACP1P32463 125 aa4.81□□□□□ -1.64
ATG4YNL223W MRPL4P36517 319 aa4.81□□□□□ -1.64
ATG4YNL223W PTC7P38797 343 aa4.81□□□□□ -1.64
ATG4YNL223W VMA21P41806 77 aa4.81□□□□□ -1.64
ATG4YNL223W PUS4P48567 403 aaKnown RBP4.81□□□□□ -1.64
ATG4YNL223W MCH1Q07376 486 aa4.81□□□□□ -1.64
ATG4YNL223W NDE2Q07500 545 aa4.81□□□□□ -1.64
ATG4YNL223W RAD28Q12021 506 aa4.81□□□□□ -1.64
ATG4YNL223W JID1Q12350 301 aa4.81□□□□□ -1.64
ATG4YNL223W GEP5Q12393 293 aa4.81□□□□□ -1.64
ATG4YNL223W PAA1Q12447 191 aaKnown RBP4.81□□□□□ -1.64
ATG4YNL223W MEC1P38111 2368 aa4.8□□□□□ -1.64
ATG4YNL223W YCR022CP25620 114 aa4.8□□□□□ -1.64
ATG4YNL223W RPS0AP32905 252 aaKnown RBP4.8□□□□□ -1.64
ATG4YNL223W YBL071CP38185 102 aa4.8□□□□□ -1.64
ATG4YNL223W CSH1P38287 376 aa4.8□□□□□ -1.64
ATG4YNL223W YPT31P38555 223 aaKnown RBP4.8□□□□□ -1.64
ATG4YNL223W PET100P38958 111 aa4.8□□□□□ -1.64
ATG4YNL223W BDH1P39714 382 aa4.8□□□□□ -1.64
ATG4YNL223W SAS2P40963 338 aa4.8□□□□□ -1.64
ATG4YNL223W YJL163CP46996 555 aa4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms