RNA–Protein interactions for RNA: YNL007C

SIS1, Transcript of Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p, yeast

Gene SIS1, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS1	YNL007C	YAP1802	P53309	568 aa		10.14	□□□□□ -0.79
SIS1	YNL007C	SSU72	P53538	206 aa	Predicted RBP	10.14	□□□□□ -0.79
SIS1	YNL007C	CTR3	Q06686	241 aa		10.14	□□□□□ -0.79
SIS1	YNL007C	TY1A-GR1	Q12085	440 aa		10.14	□□□□□ -0.79
SIS1	YNL007C	POM34	Q12445	299 aa		10.14	□□□□□ -0.79
SIS1	YNL007C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	10.14	□□□□□ -0.79
SIS1	YNL007C	TY1A-OL	Q92392	440 aa	Known RBP	10.14	□□□□□ -0.79
SIS1	YNL007C	QDR3	P38227	689 aa		10.13	□□□□□ -0.79
SIS1	YNL007C	YIL012W	P40551	113 aa		10.13	□□□□□ -0.79
SIS1	YNL007C	YIR020C	P40575	100 aa		10.13	□□□□□ -0.79
SIS1	YNL007C	YGR045C	P53229	120 aa		10.13	□□□□□ -0.79
SIS1	YNL007C	MIX17	Q03667	156 aa		10.13	□□□□□ -0.79
SIS1	YNL007C	YMR007W	Q03675	126 aa		10.13	□□□□□ -0.79
SIS1	YNL007C	AVO2	Q04749	426 aa		10.13	□□□□□ -0.79
SIS1	YNL007C	CSI2	Q08054	341 aa		10.13	□□□□□ -0.79
SIS1	YNL007C	YBL029C-A	Q3E756	94 aa		10.13	□□□□□ -0.79
SIS1	YNL007C	PAU1	P0CE88	120 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	PAU14	P0CE89	120 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	PAU6	P0CE90	120 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	PAU18	P0CE91	120 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	PAU8	P0CE92	120 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	PAU11	P0CE93	120 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	PAU13	P38725	120 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	PET100	P38958	111 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	PAU10	Q03050	120 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	LRS4	Q04087	347 aa	Known RBP	10.12	□□□□□ -0.79
SIS1	YNL007C	ZEO1	Q08245	113 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	PAU20	Q08322	120 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	SPO24	Q3E752	67 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	PAU9	Q3E770	120 aa		10.12	□□□□□ -0.79
SIS1	YNL007C	DAL3	P32459	195 aa		10.11	□□□□□ -0.79
SIS1	YNL007C	YIP1	P53039	248 aa		10.11	□□□□□ -0.79
SIS1	YNL007C	HHO1	P53551	258 aa		10.11	□□□□□ -0.79
SIS1	YNL007C	BOR1	P53838	576 aa		10.11	□□□□□ -0.79
SIS1	YNL007C	YPR145C-A	Q2V2P0	78 aa		10.11	□□□□□ -0.79
SIS1	YNL007C	ATG8	P38182	117 aa	RIP-Chip data	10.1	□□□□□ -0.79	not detected
SIS1	YNL007C	DER1	P38307	211 aa		10.1	□□□□□ -0.79
SIS1	YNL007C	PTC7	P38797	343 aa		10.1	□□□□□ -0.79
SIS1	YNL007C	NOP16	P40007	231 aa	Known RBP	10.1	□□□□□ -0.79
SIS1	YNL007C	MIC27	P50945	234 aa		10.1	□□□□□ -0.79
SIS1	YNL007C	TIM21	P53220	239 aa		10.1	□□□□□ -0.79
SIS1	YNL007C	YGR151C	P53287	111 aa		10.1	□□□□□ -0.79
SIS1	YNL007C	SHH3	Q04487	196 aa		10.1	□□□□□ -0.79
SIS1	YNL007C	POS5	Q06892	414 aa		10.1	□□□□□ -0.79
SIS1	YNL007C	NDE2	Q07500	545 aa		10.1	□□□□□ -0.79
SIS1	YNL007C	ATO3	Q12359	275 aa		10.1	□□□□□ -0.79
SIS1	YNL007C	ADH3	P07246	375 aa	Known RBP	10.09	□□□□□ -0.79
SIS1	YNL007C	HEM13	P11353	328 aa	Known RBP	10.09	□□□□□ -0.79
SIS1	YNL007C	BGL2	P15703	313 aa	Known RBP	10.09	□□□□□ -0.79
SIS1	YNL007C	ACP1	P32463	125 aa		10.09	□□□□□ -0.79
SIS1	YNL007C	MRPL4	P36517	319 aa		10.09	□□□□□ -0.79
SIS1	YNL007C	MOG1	P47123	218 aa		10.09	□□□□□ -0.79
SIS1	YNL007C	YHP1	Q04116	353 aa		10.09	□□□□□ -0.79
SIS1	YNL007C	ADH6	Q04894	360 aa	Known RBP	10.09	□□□□□ -0.79
SIS1	YNL007C	ADE8	P04161	214 aa		10.08	□□□□□ -0.8
SIS1	YNL007C	SEC59	P20048	519 aa		10.08	□□□□□ -0.8
SIS1	YNL007C	TOM40	P23644	387 aa	Known RBP	10.08	□□□□□ -0.8
SIS1	YNL007C	LAC1	P28496	418 aa		10.08	□□□□□ -0.8
SIS1	YNL007C	ALK2	P32789	676 aa	Predicted RBP	10.08	□□□□□ -0.8
SIS1	YNL007C	NTF2	P33331	125 aa	Known RBP	10.08	□□□□□ -0.8
SIS1	YNL007C	VMA21	P41806	77 aa		10.08	□□□□□ -0.8
SIS1	YNL007C	YNL234W	P53857	426 aa		10.08	□□□□□ -0.8
SIS1	YNL007C	STD1	Q02794	444 aa		10.08	□□□□□ -0.8
SIS1	YNL007C	ERV2	Q12284	196 aa		10.08	□□□□□ -0.8
SIS1	YNL007C	RDL1	Q12305	139 aa	Known RBP	10.08	□□□□□ -0.8
SIS1	YNL007C	JID1	Q12350	301 aa		10.08	□□□□□ -0.8
SIS1	YNL007C	URA2	P07259	2214 aa	Known RBP	10.07	□□□□□ -0.8
SIS1	YNL007C	YMR316C-A	I2HB70	103 aa		10.07	□□□□□ -0.8
SIS1	YNL007C	PHS1	P40857	217 aa		10.07	□□□□□ -0.8
SIS1	YNL007C	LST8	P41318	303 aa		10.07	□□□□□ -0.8
SIS1	YNL007C	BNS1	P50084	137 aa		10.07	□□□□□ -0.8
SIS1	YNL007C	ATC1	Q04005	294 aa		10.07	□□□□□ -0.8
SIS1	YNL007C	FCY1	Q12178	158 aa		10.07	□□□□□ -0.8
SIS1	YNL007C	PAA1	Q12447	191 aa	Known RBP	10.07	□□□□□ -0.8
SIS1	YNL007C	RAD23	P32628	398 aa	Known RBP	10.06	□□□□□ -0.8
SIS1	YNL007C	YPT31	P38555	223 aa	Known RBP	10.06	□□□□□ -0.8
SIS1	YNL007C	GZF3	P42944	551 aa	Known RBP	10.06	□□□□□ -0.8
SIS1	YNL007C	NSE4	P43124	402 aa		10.06	□□□□□ -0.8
SIS1	YNL007C	LOC1	P43586	204 aa	Predicted RBP	10.06	□□□□□ -0.8
SIS1	YNL007C	TAX4	P47030	604 aa		10.06	□□□□□ -0.8
SIS1	YNL007C	SUT1	P53032	299 aa	Known RBP	10.06	□□□□□ -0.8
SIS1	YNL007C	FPR2	P32472	135 aa		10.05	□□□□□ -0.8
SIS1	YNL007C	YKR045C	P36138	183 aa		10.05	□□□□□ -0.8
SIS1	YNL007C	ATP16	Q12165	160 aa		10.05	□□□□□ -0.8
SIS1	YNL007C	GEP5	Q12393	293 aa		10.05	□□□□□ -0.8
SIS1	YNL007C	SOD1	P00445	154 aa	Known RBP	10.04	□□□□□ -0.8
SIS1	YNL007C	PIS1	P06197	220 aa	Known RBP	10.04	□□□□□ -0.8
SIS1	YNL007C	VMA11	P32842	164 aa		10.04	□□□□□ -0.8
SIS1	YNL007C	MCH1	Q07376	486 aa		10.04	□□□□□ -0.8
SIS1	YNL007C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	10.03	□□□□□ -0.8	not detected
SIS1	YNL007C	PHO85	P17157	305 aa		10.03	□□□□□ -0.8
SIS1	YNL007C	POP5	P28005	173 aa		10.03	□□□□□ -0.8
SIS1	YNL007C	MRPS9	P38120	278 aa		10.03	□□□□□ -0.8
SIS1	YNL007C	YBL071C	P38185	102 aa		10.03	□□□□□ -0.8
SIS1	YNL007C	GTT1	P40582	234 aa		10.03	□□□□□ -0.8
SIS1	YNL007C	YJL213W	P40896	331 aa		10.03	□□□□□ -0.8
SIS1	YNL007C	ABM1	P47146	123 aa		10.03	□□□□□ -0.8
SIS1	YNL007C	DAN1	P47178	298 aa		10.03	□□□□□ -0.8
SIS1	YNL007C	YGR026W	P53217	278 aa		10.03	□□□□□ -0.8
SIS1	YNL007C	RAD28	Q12021	506 aa		10.03	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 75.2 ms