RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeast

Gene CTK3, Length 891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTK3	YML112W	ETR1	P38071	380 aa		0.99	□□□□□ -2.25
CTK3	YML112W	FMP23	P38231	175 aa		0.99	□□□□□ -2.25
CTK3	YML112W	RPS20	P38701	121 aa	Known RBP	0.99	□□□□□ -2.25
CTK3	YML112W	RPF1	P38805	295 aa	Known RBP	0.99	□□□□□ -2.25
CTK3	YML112W	YHR180W	P38868	163 aa		0.99	□□□□□ -2.25
CTK3	YML112W	AST2	P39945	430 aa	Known RBP	0.99	□□□□□ -2.25
CTK3	YML112W	RFC2	P40348	353 aa		0.99	□□□□□ -2.25
CTK3	YML112W	TIR3	P40552	269 aa		0.99	□□□□□ -2.25
CTK3	YML112W	CAT5	P41735	233 aa		0.99	□□□□□ -2.25
CTK3	YML112W	GLR1	P41921	483 aa	Known RBP	0.99	□□□□□ -2.25
CTK3	YML112W	GPI14	P47088	403 aa	Known RBP	0.99	□□□□□ -2.25
CTK3	YML112W	MCM22	P47167	239 aa		0.99	□□□□□ -2.25
CTK3	YML112W	YGL101W	P53144	215 aa		0.99	□□□□□ -2.25
CTK3	YML112W	LSM7	P53905	115 aa	Known RBP	0.99	□□□□□ -2.25
CTK3	YML112W	MAK3	Q03503	176 aa		0.99	□□□□□ -2.25
CTK3	YML112W	GAS3	Q03655	524 aa		0.99	□□□□□ -2.25
CTK3	YML112W	RUB1	Q03919	77 aa		0.99	□□□□□ -2.25
CTK3	YML112W	GPI17	Q04080	534 aa		0.99	□□□□□ -2.25
CTK3	YML112W	YLR162W	Q06235	118 aa		0.99	□□□□□ -2.25
CTK3	YML112W	SHH4	Q06236	168 aa		0.99	□□□□□ -2.25
CTK3	YML112W	HRD1	Q08109	551 aa		0.99	□□□□□ -2.25
CTK3	YML112W	DGA1	Q08650	418 aa		0.99	□□□□□ -2.25
CTK3	YML112W	YIR021W-A	Q3E739	70 aa		0.99	□□□□□ -2.25
CTK3	YML112W	YKL068W-A	Q3E826	78 aa		0.99	□□□□□ -2.25
CTK3	YML112W	YFR032C-B	Q8TGU2	87 aa		0.99	□□□□□ -2.25
CTK3	YML112W	TRM732	Q03496	1420 aa		0.98	□□□□□ -2.25
CTK3	YML112W	YOR304C-A	O14468	76 aa		0.98	□□□□□ -2.25
CTK3	YML112W	RPL30	P14120	105 aa	Known RBP	0.98	□□□□□ -2.25
CTK3	YML112W	CKS1	P20486	150 aa	Known RBP	0.98	□□□□□ -2.25
CTK3	YML112W	UTP30	P36144	274 aa	Known RBP	0.98	□□□□□ -2.25
CTK3	YML112W	YBR063C	P38083	404 aa		0.98	□□□□□ -2.25
CTK3	YML112W	YEA4	P40004	342 aa		0.98	□□□□□ -2.25
CTK3	YML112W	PGD1	P40356	397 aa		0.98	□□□□□ -2.25
CTK3	YML112W	YJL218W	P40892	196 aa	Known RBP	0.98	□□□□□ -2.25
CTK3	YML112W	FAR7	P43592	221 aa		0.98	□□□□□ -2.25
CTK3	YML112W	FIP1	P45976	327 aa		0.98	□□□□□ -2.25
CTK3	YML112W	ARP3	P47117	449 aa	Known RBP	0.98	□□□□□ -2.25
CTK3	YML112W	ARO8	P53090	500 aa	Known RBP	0.98	□□□□□ -2.25
CTK3	YML112W	YGR050C	P53231	118 aa		0.98	□□□□□ -2.25
CTK3	YML112W	YKR005C	Q02203	525 aa		0.98	□□□□□ -2.25
CTK3	YML112W	DML1	Q03652	475 aa		0.98	□□□□□ -2.25
CTK3	YML112W	AIM36	Q03798	255 aa		0.98	□□□□□ -2.25
CTK3	YML112W	PKR1	Q03880	122 aa	Known RBP	0.98	□□□□□ -2.25
CTK3	YML112W	RAV2	Q03956	351 aa		0.98	□□□□□ -2.25
CTK3	YML112W	CSN9	Q03981	162 aa		0.98	□□□□□ -2.25
CTK3	YML112W	THI74	Q04083	370 aa		0.98	□□□□□ -2.25
CTK3	YML112W	YDR391C	Q04170	232 aa		0.98	□□□□□ -2.25
CTK3	YML112W	YMR253C	Q04835	414 aa		0.98	□□□□□ -2.25
CTK3	YML112W	FYV12	Q08559	129 aa		0.98	□□□□□ -2.25
CTK3	YML112W	NIP7	Q08962	181 aa	Known RBP	0.98	□□□□□ -2.25
CTK3	YML112W	MDM32	Q12171	622 aa		0.98	□□□□□ -2.25
CTK3	YML112W	PSF1	Q12488	208 aa		0.98	□□□□□ -2.25
CTK3	YML112W	TDA8	Q6B2U8	126 aa		0.98	□□□□□ -2.25
CTK3	YML112W	TY1B-H	O13535	1793 aa		0.98	□□□□□ -2.25
CTK3	YML112W	TAF2	P23255	1407 aa		0.98	□□□□□ -2.25
CTK3	YML112W	MBF1	O14467	151 aa	Known RBP	0.97	□□□□□ -2.25
CTK3	YML112W	REP2	P03872	296 aa		0.97	□□□□□ -2.25
CTK3	YML112W	RPL25	P04456	142 aa	Known RBP	0.97	□□□□□ -2.25
CTK3	YML112W	YPR170W-B	P0C5R9	85 aa		0.97	□□□□□ -2.25
CTK3	YML112W	NSP1	P14907	823 aa	Known RBP	0.97	□□□□□ -2.25
CTK3	YML112W	SEC14	P24280	304 aa	Known RBP	0.97	□□□□□ -2.25
CTK3	YML112W	CNB1	P25296	175 aa		0.97	□□□□□ -2.25
CTK3	YML112W	PTC1	P35182	281 aa		0.97	□□□□□ -2.25
CTK3	YML112W	TMA19	P35691	167 aa	Known RBP	0.97	□□□□□ -2.25
CTK3	YML112W	YHR140W	P38842	239 aa		0.97	□□□□□ -2.25
CTK3	YML112W	RGI1	P40043	161 aa	Predicted RBP	0.97	□□□□□ -2.25
CTK3	YML112W	APQ12	P40532	138 aa		0.97	□□□□□ -2.25
CTK3	YML112W	SFT1	P43682	97 aa		0.97	□□□□□ -2.25
CTK3	YML112W	RBL2	P48606	106 aa	Known RBP	0.97	□□□□□ -2.25
CTK3	YML112W	LSM3	P57743	89 aa	Known RBP	0.97	□□□□□ -2.25
CTK3	YML112W	HHT1	P61830	136 aa		0.97	□□□□□ -2.25
CTK3	YML112W	VPS71	Q03433	280 aa		0.97	□□□□□ -2.25
CTK3	YML112W	PLP1	Q04004	230 aa		0.97	□□□□□ -2.25
CTK3	YML112W	TRM12	Q04235	462 aa		0.97	□□□□□ -2.25
CTK3	YML112W	PRP11	Q07350	266 aa	Predicted RBP	0.97	□□□□□ -2.25
CTK3	YML112W	YOL014W	Q08110	124 aa		0.97	□□□□□ -2.25
CTK3	YML112W	YPL225W	Q08971	146 aa	Known RBP	0.97	□□□□□ -2.25
CTK3	YML112W	FSF1	Q12029	327 aa	Known RBP	0.97	□□□□□ -2.25
CTK3	YML112W	SPC3	Q12133	184 aa		0.97	□□□□□ -2.25
CTK3	YML112W	RTR2	Q12378	196 aa		0.97	□□□□□ -2.25
CTK3	YML112W	YLR099W-A	Q3E798	87 aa		0.97	□□□□□ -2.25
CTK3	YML112W	TSC11	P40061	1430 aa		0.97	□□□□□ -2.25
CTK3	YML112W	ADK1	P07170	222 aa	Known RBP	0.96	□□□□□ -2.26
CTK3	YML112W	QCR8	P08525	94 aa		0.96	□□□□□ -2.26
CTK3	YML112W	TIR1	P10863	254 aa		0.96	□□□□□ -2.26
CTK3	YML112W	SNF4	P12904	322 aa		0.96	□□□□□ -2.26
CTK3	YML112W	SPO13	P23624	291 aa		0.96	□□□□□ -2.26
CTK3	YML112W	STP22	P25604	385 aa		0.96	□□□□□ -2.26
CTK3	YML112W	MRP49	P32388	137 aa		0.96	□□□□□ -2.26
CTK3	YML112W	YBL010C	P32788	280 aa		0.96	□□□□□ -2.26
CTK3	YML112W	SNC2	P33328	115 aa		0.96	□□□□□ -2.26
CTK3	YML112W	PAN3	P36102	679 aa	Predicted RBP	0.96	□□□□□ -2.26
CTK3	YML112W	MRPL24	P36525	258 aa	Predicted RBP	0.96	□□□□□ -2.26
CTK3	YML112W	IRC22	P40006	225 aa		0.96	□□□□□ -2.26
CTK3	YML112W	HMF1	P40037	129 aa	Known RBP	0.96	□□□□□ -2.26
CTK3	YML112W	YNL217W	P40152	326 aa		0.96	□□□□□ -2.26
CTK3	YML112W	YPL073C	P40323	161 aa		0.96	□□□□□ -2.26
CTK3	YML112W	SER2	P42941	309 aa		0.96	□□□□□ -2.26
CTK3	YML112W	YGL193C	P53097	103 aa		0.96	□□□□□ -2.26
CTK3	YML112W	SAY1	P53324	424 aa		0.96	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 155.9 ms