RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	FUN19	P28003	413 aa	Predicted RBP	4.88	□□□□□ -1.63
DBP9	YLR276C	TOA2	P32774	122 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	BAT1	P38891	393 aa	Known RBP	4.88	□□□□□ -1.63
DBP9	YLR276C	YEA4	P40004	342 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	YGL230C	P53074	147 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	LST7	P53237	242 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	MTM1	P53320	366 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	FSH2	Q05015	223 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	COQ11	Q05892	277 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	SYM1	Q06563	197 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	YPL162C	Q12042	273 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	VAR1	P02381	398 aa		4.87	□□□□□ -1.63
DBP9	YLR276C	INO4	P13902	151 aa		4.87	□□□□□ -1.63
DBP9	YLR276C	SEC11	P15367	167 aa		4.87	□□□□□ -1.63
DBP9	YLR276C	RPS2	P25443	254 aa	Known RBP	4.87	□□□□□ -1.63
DBP9	YLR276C	MSS51	P32335	436 aa		4.87	□□□□□ -1.63
DBP9	YLR276C	ZRT1	P32804	376 aa		4.87	□□□□□ -1.63
DBP9	YLR276C	TKL2	P33315	681 aa		4.87	□□□□□ -1.63
DBP9	YLR276C	TAE1	P38340	232 aa		4.87	□□□□□ -1.63
DBP9	YLR276C	INM1	P38710	295 aa		4.87	□□□□□ -1.63
DBP9	YLR276C	PRP11	Q07350	266 aa	Predicted RBP	4.87	□□□□□ -1.63
DBP9	YLR276C	PFA4	Q12006	378 aa		4.87	□□□□□ -1.63
DBP9	YLR276C	COX10	P21592	462 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	PPA2	P28239	310 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	YOR062C	P36025	268 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	MCR1	P36060	302 aa	Known RBP	4.86	□□□□□ -1.63
DBP9	YLR276C	DRE2	P36152	348 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	RPS20	P38701	121 aa	Known RBP	4.86	□□□□□ -1.63
DBP9	YLR276C	YFL065C	P43539	102 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	YPR203W	Q08994	102 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	MCP1	Q12106	302 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	MCT1	Q12283	360 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	RNH203	Q12338	110 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	YCL012C	Q8J0M4	134 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	ODC2	Q99297	307 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	STE7	P06784	515 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	MCK1	P21965	375 aa	Known RBP	4.86	□□□□□ -1.63
DBP9	YLR276C	RNQ1	P25367	405 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	RIP-Chip
DBP9	YLR276C	DER1	P38307	211 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	SDS24	P38314	527 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	YER085C	P40058	173 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	YIP3	P53633	176 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	CRZ1	P53968	678 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	SDH7	Q04401	133 aa		4.86	□□□□□ -1.63
DBP9	YLR276C	UTP23	Q12339	254 aa	Known RBP	4.86	□□□□□ -1.63
DBP9	YLR276C	CUP2	P15315	225 aa		4.85	□□□□□ -1.63
DBP9	YLR276C	TRX3	P25372	127 aa		4.85	□□□□□ -1.63
DBP9	YLR276C	YCR100C	P25606	316 aa		4.85	□□□□□ -1.63
DBP9	YLR276C	RAD23	P32628	398 aa	Known RBP	4.85	□□□□□ -1.63
DBP9	YLR276C	YBR292C	P38357	123 aa		4.85	□□□□□ -1.63
DBP9	YLR276C	TEM1	P38987	245 aa		4.85	□□□□□ -1.63
DBP9	YLR276C	PAU4	P53427	120 aa		4.85	□□□□□ -1.63
DBP9	YLR276C	RRG8	Q06109	277 aa		4.85	□□□□□ -1.63
DBP9	YLR276C	ATO3	Q12359	275 aa		4.85	□□□□□ -1.63
DBP9	YLR276C	SCS22	Q6Q595	175 aa		4.85	□□□□□ -1.63
DBP9	YLR276C	PAU1	P0CE88	120 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	PAU14	P0CE89	120 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	PAU6	P0CE90	120 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	PAU18	P0CE91	120 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	PAU8	P0CE92	120 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	PAU11	P0CE93	120 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	MKK1	P32490	508 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	REC114	P32841	428 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	PHO88	P38264	188 aa	Predicted RBP	4.84	□□□□□ -1.63
DBP9	YLR276C	PAU13	P38725	120 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	HAC1	P41546	238 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	SNO3	P43544	222 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	YGL235W	P53071	178 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	RPL21A	Q02753	160 aa	Known RBP	4.84	□□□□□ -1.63
DBP9	YLR276C	PAU10	Q03050	120 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	THI74	Q04083	370 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	PAU20	Q08322	120 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	ORT1	Q12375	292 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	RPL21B	Q12672	160 aa	Known RBP	4.84	□□□□□ -1.63
DBP9	YLR276C	YLR363W-A	Q3E747	85 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	PAU9	Q3E770	120 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	YPL229W	Q99395	206 aa		4.84	□□□□□ -1.63
DBP9	YLR276C	CDC21	P06785	304 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	YOL162W	P0CF19	215 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	DPM1	P14020	267 aa	Known RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	GLN3	P18494	730 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	HYP2	P23301	157 aa	Known RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	MSL1	P40567	111 aa	Predicted RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	HIT1	P46973	164 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	XPT1	P47165	209 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	MPP6	P53725	186 aa	Predicted RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	ALG9	P53868	555 aa	Known RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	SUR7	P54003	302 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	YLR460C	P54007	376 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	YMR310C	Q04867	317 aa	Predicted RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	SME1	Q12330	94 aa	Predicted RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	YLR111W	Q12528	110 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	YKR104W	P0CE69	306 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	RPL12A	P0CX53	165 aa	Known RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	RPL12B	P0CX54	165 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	MRPL24	P36525	258 aa	Predicted RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	CBP4	P37267	147 aa		4.83	□□□□□ -1.64
DBP9	YLR276C	YHR138C	P38841	114 aa	Predicted RBP	4.83	□□□□□ -1.64
DBP9	YLR276C	RPB11	P38902	120 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 110.2 ms