RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	PRP11	Q07350	266 aa	Predicted RBP	3	□□□□□ -1.93
RSA3	YLR221C	YLR053C	Q12026	108 aa		3	□□□□□ -1.93
RSA3	YLR221C	GPA2	P10823	449 aa		2.99	□□□□□ -1.93
RSA3	YLR221C	YBR220C	P38318	560 aa		2.99	□□□□□ -1.93
RSA3	YLR221C	YPR013C	Q12145	317 aa		2.99	□□□□□ -1.93
RSA3	YLR221C	ARC19	P33204	171 aa	Known RBP	2.98	□□□□□ -1.93
RSA3	YLR221C	UPS2	P35200	230 aa		2.98	□□□□□ -1.93
RSA3	YLR221C	SBH1	P52870	82 aa		2.98	□□□□□ -1.93
RSA3	YLR221C	TIM13	P53299	105 aa		2.98	□□□□□ -1.93
RSA3	YLR221C	DAD4	P69851	72 aa		2.98	□□□□□ -1.93
RSA3	YLR221C	TMA20	P89886	181 aa	Predicted RBP	2.98	□□□□□ -1.93
RSA3	YLR221C	GRX5	Q02784	150 aa		2.98	□□□□□ -1.93
RSA3	YLR221C	YPR127W	Q06494	345 aa		2.98	□□□□□ -1.93
RSA3	YLR221C	ATP20	Q12233	115 aa		2.98	□□□□□ -1.93
RSA3	YLR221C	STP22	P25604	385 aa		2.97	□□□□□ -1.93
RSA3	YLR221C	HSK3	P69852	69 aa		2.97	□□□□□ -1.93
RSA3	YLR221C	RNH202	Q05635	350 aa		2.97	□□□□□ -1.93
RSA3	YLR221C	DAS2	Q12084	232 aa		2.97	□□□□□ -1.93
RSA3	YLR221C	YOR214C	Q12282	236 aa		2.97	□□□□□ -1.93
RSA3	YLR221C	MDM35	O60200	86 aa		2.96	□□□□□ -1.94
RSA3	YLR221C	SFK1	P35735	353 aa		2.96	□□□□□ -1.94
RSA3	YLR221C	AME1	P38313	324 aa		2.96	□□□□□ -1.94
RSA3	YLR221C	SOL1	P50278	321 aa		2.96	□□□□□ -1.94
RSA3	YLR221C	VPS28	Q02767	242 aa		2.96	□□□□□ -1.94
RSA3	YLR221C	MAK3	Q03503	176 aa		2.96	□□□□□ -1.94
RSA3	YLR221C	RDI1	Q12434	202 aa		2.96	□□□□□ -1.94
RSA3	YLR221C	QCR8	P08525	94 aa		2.95	□□□□□ -1.94
RSA3	YLR221C	NUF2	P33895	451 aa		2.95	□□□□□ -1.94
RSA3	YLR221C	YHL018W	P38744	120 aa	Predicted RBP	2.95	□□□□□ -1.94
RSA3	YLR221C	GAL83	Q04739	417 aa		2.95	□□□□□ -1.94
RSA3	YLR221C	SMD2	Q06217	110 aa	Known RBP	2.95	□□□□□ -1.94
RSA3	YLR221C	FYV12	Q08559	129 aa		2.95	□□□□□ -1.94
RSA3	YLR221C	RPL2A	P0CX45	254 aa	Known RBP	2.94	□□□□□ -1.94
RSA3	YLR221C	RPL2B	P0CX46	254 aa	Known RBP	2.94	□□□□□ -1.94
RSA3	YLR221C	HSP30	P25619	332 aa		2.94	□□□□□ -1.94
RSA3	YLR221C	GSP2	P32836	220 aa	Known RBP	2.94	□□□□□ -1.94
RSA3	YLR221C	YNL200C	P40165	246 aa	Known RBP	2.94	□□□□□ -1.94
RSA3	YLR221C	COX8	P04039	78 aa		2.93	□□□□□ -1.94
RSA3	YLR221C	FPR1	P20081	114 aa	Known RBP	2.93	□□□□□ -1.94
RSA3	YLR221C	RRT1	P38192	103 aa		2.93	□□□□□ -1.94
RSA3	YLR221C	THG1	P53215	237 aa	Known RBP	2.93	□□□□□ -1.94
RSA3	YLR221C	YKR005C	Q02203	525 aa		2.93	□□□□□ -1.94
RSA3	YLR221C	MZM1	Q03429	123 aa	Predicted RBP	2.93	□□□□□ -1.94
RSA3	YLR221C	YOR015W	Q12169	119 aa		2.93	□□□□□ -1.94
RSA3	YLR221C	FYV4	P38783	130 aa	Predicted RBP	2.92	□□□□□ -1.94
RSA3	YLR221C	GLR1	P41921	483 aa	Known RBP	2.92	□□□□□ -1.94
RSA3	YLR221C	YFH7	P43591	353 aa		2.92	□□□□□ -1.94
RSA3	YLR221C	THI74	Q04083	370 aa		2.92	□□□□□ -1.94
RSA3	YLR221C	PIR1	Q03178	341 aa		2.91	□□□□□ -1.94
RSA3	YLR221C	RCE1	Q03530	315 aa		2.91	□□□□□ -1.94
RSA3	YLR221C	YCR023C	P25351	611 aa		2.9	□□□□□ -1.95
RSA3	YLR221C	EDC3	P39998	551 aa	Known RBP	2.9	□□□□□ -1.95
RSA3	YLR221C	FLX1	P40464	311 aa		2.9	□□□□□ -1.95
RSA3	YLR221C	YGL235W	P53071	178 aa		2.9	□□□□□ -1.95
RSA3	YLR221C	YGL101W	P53144	215 aa		2.9	□□□□□ -1.95
RSA3	YLR221C	YDR476C	Q03362	224 aa		2.9	□□□□□ -1.95
RSA3	YLR221C	CPR5	P35176	225 aa		2.89	□□□□□ -1.95
RSA3	YLR221C	ALB1	P47019	175 aa	Predicted RBP	2.89	□□□□□ -1.95
RSA3	YLR221C	NSL1	Q12143	216 aa		2.89	□□□□□ -1.95
RSA3	YLR221C	YNL146C-A	Q3E7Z1	64 aa		2.89	□□□□□ -1.95
RSA3	YLR221C	RAD6	P06104	172 aa		2.88	□□□□□ -1.95
RSA3	YLR221C	RPS28B	P0C0X0	67 aa	Known RBP	2.88	□□□□□ -1.95
RSA3	YLR221C	CSH1	P38287	376 aa		2.88	□□□□□ -1.95
RSA3	YLR221C	RIO2	P40160	425 aa	Known RBP	2.88	□□□□□ -1.95
RSA3	YLR221C	YAE1	P47118	141 aa	Predicted RBP	2.88	□□□□□ -1.95
RSA3	YLR221C	FIT2	Q08906	153 aa		2.88	□□□□□ -1.95
RSA3	YLR221C	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.88	□□□□□ -1.95
RSA3	YLR221C	MSB2	P32334	1306 aa		2.88	□□□□□ -1.95
RSA3	YLR221C	UBC6	P33296	250 aa	Predicted RBP	2.87	□□□□□ -1.95
RSA3	YLR221C	DER1	P38307	211 aa		2.87	□□□□□ -1.95
RSA3	YLR221C	HPA3	P39979	161 aa		2.87	□□□□□ -1.95
RSA3	YLR221C	EFM5	P53200	248 aa	Known RBP	2.87	□□□□□ -1.95
RSA3	YLR221C	CWC27	Q02770	301 aa		2.87	□□□□□ -1.95
RSA3	YLR221C	DML1	Q03652	475 aa		2.87	□□□□□ -1.95
RSA3	YLR221C	RRP17	Q04031	235 aa	Predicted RBP	2.87	□□□□□ -1.95
RSA3	YLR221C	FIG1	P38224	298 aa		2.86	□□□□□ -1.95
RSA3	YLR221C	HYR1	P40581	163 aa	Known RBP	2.86	□□□□□ -1.95
RSA3	YLR221C	YOR381W-A	Q3E804	55 aa		2.86	□□□□□ -1.95
RSA3	YLR221C	TRM3	Q07527	1436 aa		2.85	□□□□□ -1.95
RSA3	YLR221C	RPB7	P34087	171 aa		2.85	□□□□□ -1.95
RSA3	YLR221C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.85	□□□□□ -1.95	not detected
RSA3	YLR221C	NSE4	P43124	402 aa		2.84	□□□□□ -1.95
RSA3	YLR221C	LSM3	P57743	89 aa	Known RBP	2.84	□□□□□ -1.95
RSA3	YLR221C	SYM1	Q06563	197 aa		2.84	□□□□□ -1.95
RSA3	YLR221C	UBI4	P0CG63	381 aa	Known RBP	2.83	□□□□□ -1.96
RSA3	YLR221C	YEL073C	P39974	107 aa		2.83	□□□□□ -1.96
RSA3	YLR221C	UBC7	Q02159	165 aa		2.83	□□□□□ -1.96
RSA3	YLR221C	UPS3	Q04006	179 aa		2.83	□□□□□ -1.96
RSA3	YLR221C	YHP1	Q04116	353 aa		2.83	□□□□□ -1.96
RSA3	YLR221C	UPS1	Q05776	175 aa		2.83	□□□□□ -1.96
RSA3	YLR221C	ATG41	Q12048	136 aa		2.83	□□□□□ -1.96
RSA3	YLR221C	EFG1	Q3E705	233 aa	Known RBP	2.83	□□□□□ -1.96
RSA3	YLR221C	STF2	P16965	84 aa		2.82	□□□□□ -1.96
RSA3	YLR221C	BUB2	P26448	306 aa	Predicted RBP	2.82	□□□□□ -1.96
RSA3	YLR221C	YHL042W	P38729	150 aa		2.82	□□□□□ -1.96
RSA3	YLR221C	RIM9	Q04734	239 aa		2.82	□□□□□ -1.96
RSA3	YLR221C	PST2	Q12335	198 aa	Known RBP	2.82	□□□□□ -1.96
RSA3	YLR221C	PBI2	P0CT04	75 aa	Known RBP	2.81	□□□□□ -1.96
RSA3	YLR221C	MAK31	P23059	88 aa		2.81	□□□□□ -1.96
RSA3	YLR221C	NQM1	P53228	333 aa	Predicted RBP	2.81	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 140.1 ms