RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C RIB5P38145 238 aa8□□□□□ -1.13
POM34YLR018C YJL163CP46996 555 aa8□□□□□ -1.13
POM34YLR018C YAP1802P53309 568 aa8□□□□□ -1.13
POM34YLR018C YMR007WQ03675 126 aa8□□□□□ -1.13
POM34YLR018C SDO1Q07953 250 aaKnown RBP8□□□□□ -1.13
POM34YLR018C QCR9P22289 66 aa7.99□□□□□ -1.13
POM34YLR018C TOM40P23644 387 aaKnown RBP7.99□□□□□ -1.13
POM34YLR018C LDS1P31379 325 aa7.99□□□□□ -1.13
POM34YLR018C RPL14AP36105 138 aaKnown RBP7.99□□□□□ -1.13
POM34YLR018C QDR3P38227 689 aa7.99□□□□□ -1.13
POM34YLR018C RPL14BP38754 138 aaKnown RBP7.99□□□□□ -1.13
POM34YLR018C BOR1P53838 576 aa7.99□□□□□ -1.13
POM34YLR018C SHH3Q04487 196 aa7.99□□□□□ -1.13
POM34YLR018C AVO2Q04749 426 aa7.99□□□□□ -1.13
POM34YLR018C SME1Q12330 94 aaPredicted RBP7.99□□□□□ -1.13
POM34YLR018C PAA1Q12447 191 aaKnown RBP7.99□□□□□ -1.13
POM34YLR018C YMR316C-AI2HB70 103 aa7.98□□□□□ -1.13
POM34YLR018C SUA7P29055 345 aaPredicted RBP7.98□□□□□ -1.13
POM34YLR018C PTC7P38797 343 aa7.98□□□□□ -1.13
POM34YLR018C MIC27P50945 234 aa7.98□□□□□ -1.13
POM34YLR018C YPL108WQ02872 168 aaPredicted RBP7.98□□□□□ -1.13
POM34YLR018C SRL1Q08673 210 aa7.98□□□□□ -1.13
POM34YLR018C RAD28Q12021 506 aa7.98□□□□□ -1.13
POM34YLR018C RKI1Q12189 258 aa7.98□□□□□ -1.13
POM34YLR018C ILV5P06168 395 aaKnown RBP7.97□□□□□ -1.13
POM34YLR018C FPR2P32472 135 aa7.97□□□□□ -1.13
POM34YLR018C MRPL38P35996 138 aaPredicted RBP7.97□□□□□ -1.13
POM34YLR018C SHB17P36136 271 aaKnown RBP7.97□□□□□ -1.13
POM34YLR018C DER1P38307 211 aa7.97□□□□□ -1.13
POM34YLR018C SMD3P43321 101 aaKnown RBP7.97□□□□□ -1.13
POM34YLR018C Q0142Q9ZZW4 58 aa7.97□□□□□ -1.13
POM34YLR018C PIS1P06197 220 aaKnown RBP7.96□□□□□ -1.14
POM34YLR018C FEN2P25621 512 aaKnown RBP7.96□□□□□ -1.14
POM34YLR018C YBL071CP38185 102 aa7.96□□□□□ -1.14
POM34YLR018C YER188WP40103 239 aa7.96□□□□□ -1.14
POM34YLR018C GPP2P40106 250 aaKnown RBP7.96□□□□□ -1.14
POM34YLR018C RTS2P40962 232 aa7.96□□□□□ -1.14
POM34YLR018C RIB4P50861 169 aaPredicted RBP7.96□□□□□ -1.14
POM34YLR018C LST7P53237 242 aa7.96□□□□□ -1.14
POM34YLR018C CAF40P53829 373 aa7.96□□□□□ -1.14
POM34YLR018C IRC23Q08416 157 aa7.96□□□□□ -1.14
POM34YLR018C TY1A-DR4O74302 440 aa7.95□□□□□ -1.14
POM34YLR018C RPL15AP05748 204 aaKnown RBP7.95□□□□□ -1.14
POM34YLR018C TY1A-AP0CX57 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-PR1P0CX58 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-ORP0CX59 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-PR2P0CX60 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-DR5P0CX65 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-ER2P0CX66 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-GR3P0CX67 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-LR1P0CX68 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-MR2P0CX69 440 aa7.95□□□□□ -1.14
POM34YLR018C YPS1P32329 569 aa7.95□□□□□ -1.14
POM34YLR018C DAL3P32459 195 aa7.95□□□□□ -1.14
POM34YLR018C YAR068WP39564 161 aa7.95□□□□□ -1.14
POM34YLR018C BDH1P39714 382 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-JR2P47099 440 aa7.95□□□□□ -1.14
POM34YLR018C PAU4P53427 120 aa7.95□□□□□ -1.14
POM34YLR018C RPL15BP54780 204 aaPredicted RBP7.95□□□□□ -1.14
POM34YLR018C TY1A-DR1Q03856 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-ML1Q04706 440 aaKnown RBP7.95□□□□□ -1.14
POM34YLR018C TY1A-BRQ12217 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-NL2Q12470 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-GR2Q12485 440 aa7.95□□□□□ -1.14
POM34YLR018C CCW14O13547 238 aa7.94□□□□□ -1.14
POM34YLR018C DFR1P07807 211 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
POM34YLR018C MRP2P10663 115 aaPredicted RBP7.94□□□□□ -1.14
POM34YLR018C CSH1P38287 376 aa7.94□□□□□ -1.14
POM34YLR018C TIF11P38912 153 aaKnown RBP7.94□□□□□ -1.14
POM34YLR018C TAX4P47030 604 aa7.94□□□□□ -1.14
POM34YLR018C YGR018CP53211 109 aa7.94□□□□□ -1.14
POM34YLR018C PBP4Q07362 185 aaKnown RBP7.94□□□□□ -1.14
POM34YLR018C RXT3Q07458 294 aa7.94□□□□□ -1.14
POM34YLR018C PCC1Q3E833 88 aa7.94□□□□□ -1.14
POM34YLR018C YCR022CP25620 114 aa7.93□□□□□ -1.14
POM34YLR018C ALK2P32789 676 aaPredicted RBP7.93□□□□□ -1.14
POM34YLR018C YIL024CP40543 189 aa7.93□□□□□ -1.14
POM34YLR018C AVT5P38176 459 aa7.92□□□□□ -1.14
POM34YLR018C CDS1P38221 457 aa7.92□□□□□ -1.14
POM34YLR018C DOG2P38773 246 aa7.92□□□□□ -1.14
POM34YLR018C DOG1P38774 246 aa7.92□□□□□ -1.14
POM34YLR018C SNO1Q03144 224 aa7.92□□□□□ -1.14
POM34YLR018C ATC1Q04005 294 aa7.92□□□□□ -1.14
POM34YLR018C YMR253CQ04835 414 aa7.92□□□□□ -1.14
POM34YLR018C YOR352WQ08816 343 aa7.92□□□□□ -1.14
POM34YLR018C YOR097CQ12274 175 aaPredicted RBP7.92□□□□□ -1.14
POM34YLR018C PAU1P0CE88 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU14P0CE89 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU6P0CE90 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU18P0CE91 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU8P0CE92 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU11P0CE93 120 aa7.91□□□□□ -1.14
POM34YLR018C CNB1P25296 175 aa7.91□□□□□ -1.14
POM34YLR018C PRS4P38063 326 aaPredicted RBP7.91□□□□□ -1.14
POM34YLR018C RRT1P38192 103 aa7.91□□□□□ -1.14
POM34YLR018C PAU13P38725 120 aa7.91□□□□□ -1.14
POM34YLR018C ATG27P46989 271 aa7.91□□□□□ -1.14
POM34YLR018C DSK2P48510 373 aa7.91□□□□□ -1.14
POM34YLR018C PAU10Q03050 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU20Q08322 120 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 263.2 ms