RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C OST3P48439 350 aa3.8□□□□□ -1.8
UBI4YLL039C TAF4P50105 388 aa3.8□□□□□ -1.8
UBI4YLL039C RPL9BP51401 191 aaKnown RBP3.8□□□□□ -1.8
UBI4YLL039C YGR151CP53287 111 aa3.8□□□□□ -1.8
UBI4YLL039C SCW4P53334 386 aaKnown RBP3.8□□□□□ -1.8
UBI4YLL039C YNL046WP53956 172 aa3.8□□□□□ -1.8
UBI4YLL039C MOT3P54785 490 aaKnown RBP3.8□□□□□ -1.8
UBI4YLL039C YPL257WQ08974 193 aa3.8□□□□□ -1.8
UBI4YLL039C ATG5Q12380 294 aa3.8□□□□□ -1.8
UBI4YLL039C Q0297Q9ZZV8 51 aa3.8□□□□□ -1.8
UBI4YLL039C MDM10P18409 493 aa3.79□□□□□ -1.8
UBI4YLL039C TCA17P32613 152 aa3.79□□□□□ -1.8
UBI4YLL039C YOX1P34161 385 aa3.79□□□□□ -1.8
UBI4YLL039C MRPL27P36526 146 aaPredicted RBP3.79□□□□□ -1.8
UBI4YLL039C UMP1P38293 148 aa3.79□□□□□ -1.8
UBI4YLL039C YND1P40009 630 aa3.79□□□□□ -1.8
UBI4YLL039C YER121WP40076 114 aa3.79□□□□□ -1.8
UBI4YLL039C SMD3P43321 101 aaKnown RBP3.79□□□□□ -1.8
UBI4YLL039C GWT1P47026 490 aa3.79□□□□□ -1.8
UBI4YLL039C YJR056CP47115 236 aa3.79□□□□□ -1.8
UBI4YLL039C YJR111CP47148 283 aaKnown RBP3.79□□□□□ -1.8
UBI4YLL039C SBH2P52871 88 aa3.79□□□□□ -1.8
UBI4YLL039C VHT1P53241 593 aa3.79□□□□□ -1.8
UBI4YLL039C YNR066CP53752 436 aa3.79□□□□□ -1.8
UBI4YLL039C TEX1P53851 422 aaKnown RBP3.79□□□□□ -1.8
UBI4YLL039C BUD25P85052 153 aa3.79□□□□□ -1.8
UBI4YLL039C CNL1Q06333 122 aa3.79□□□□□ -1.8
UBI4YLL039C VAM3Q12241 283 aa3.79□□□□□ -1.8
UBI4YLL039C SPO24Q3E752 67 aa3.79□□□□□ -1.8
UBI4YLL039C YIL134C-AQ45U18 67 aa3.79□□□□□ -1.8
UBI4YLL039C YDR157WA0A023PZE8 133 aa3.78□□□□□ -1.8
UBI4YLL039C DDI2P0CH63 225 aa3.78□□□□□ -1.8
UBI4YLL039C DDI3P0CH64 225 aa3.78□□□□□ -1.8
UBI4YLL039C YFL068WP0CX99 160 aa3.78□□□□□ -1.8
UBI4YLL039C YLL066W-AP0CY00 160 aa3.78□□□□□ -1.8
UBI4YLL039C YLL067W-AP0CY01 160 aa3.78□□□□□ -1.8
UBI4YLL039C MRP49P32388 137 aa3.78□□□□□ -1.8
UBI4YLL039C ARO4P32449 370 aaKnown RBP3.78□□□□□ -1.8
UBI4YLL039C MTC7P32633 139 aa3.78□□□□□ -1.8
UBI4YLL039C YHL044WP38727 235 aa3.78□□□□□ -1.8
UBI4YLL039C YEA4P40004 342 aa3.78□□□□□ -1.8
UBI4YLL039C YER079WP40052 210 aaKnown RBP3.78□□□□□ -1.8
UBI4YLL039C NSA2P40078 261 aaKnown RBP3.78□□□□□ -1.8
UBI4YLL039C GPI14P47088 403 aaKnown RBP3.78□□□□□ -1.8
UBI4YLL039C RIB4P50861 169 aaPredicted RBP3.78□□□□□ -1.8
UBI4YLL039C ERG25P53045 309 aa3.78□□□□□ -1.8
UBI4YLL039C EST3Q03096 181 aa3.78□□□□□ -1.8
UBI4YLL039C YDR248CQ03786 193 aa3.78□□□□□ -1.8
UBI4YLL039C YMR166CQ03829 368 aa3.78□□□□□ -1.8
UBI4YLL039C GMC1Q04399 608 aa3.78□□□□□ -1.8
UBI4YLL039C SNA4Q07549 140 aa3.78□□□□□ -1.8
UBI4YLL039C YCT1Q12235 531 aa3.78□□□□□ -1.8
UBI4YLL039C YLR146W-AQ2V2P1 62 aa3.78□□□□□ -1.8
UBI4YLL039C DYN1P36022 4092 aa3.78□□□□□ -1.8
UBI4YLL039C RPL39P04650 51 aa3.77□□□□□ -1.81
UBI4YLL039C GDH1P07262 454 aaKnown RBP3.77□□□□□ -1.81
UBI4YLL039C CPR1P14832 162 aaKnown RBP3.77□□□□□ -1.81
UBI4YLL039C NTF2P33331 125 aaKnown RBP3.77□□□□□ -1.81
UBI4YLL039C CMC1P36064 111 aa3.77□□□□□ -1.81
UBI4YLL039C MIX23P38162 196 aa3.77□□□□□ -1.81
UBI4YLL039C SLM6P38343 150 aa3.77□□□□□ -1.81
UBI4YLL039C CTR2P38865 189 aa3.77□□□□□ -1.81
UBI4YLL039C YIL060WP40519 144 aa3.77□□□□□ -1.81
UBI4YLL039C SGN1P40561 250 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
UBI4YLL039C YIR020CP40575 100 aa3.77□□□□□ -1.81
UBI4YLL039C LOC1P43586 204 aaPredicted RBP3.77□□□□□ -1.81
UBI4YLL039C NCA3P46955 337 aa3.77□□□□□ -1.81
UBI4YLL039C TAX4P47030 604 aa3.77□□□□□ -1.81
UBI4YLL039C YHC3P47040 408 aa3.77□□□□□ -1.81
UBI4YLL039C BNA1P47096 177 aa3.77□□□□□ -1.81
UBI4YLL039C APS2Q00381 147 aa3.77□□□□□ -1.81
UBI4YLL039C CTF19Q02732 369 aa3.77□□□□□ -1.81
UBI4YLL039C VPS28Q02767 242 aa3.77□□□□□ -1.81
UBI4YLL039C YDR415CQ04033 374 aaPredicted RBP3.77□□□□□ -1.81
UBI4YLL039C SHH3Q04487 196 aa3.77□□□□□ -1.81
UBI4YLL039C YMR254CQ04838 102 aa3.77□□□□□ -1.81
UBI4YLL039C MSC3Q05812 728 aa3.77□□□□□ -1.81
UBI4YLL039C MCH1Q07376 486 aa3.77□□□□□ -1.81
UBI4YLL039C HRD1Q08109 551 aa3.77□□□□□ -1.81
UBI4YLL039C GEP5Q12393 293 aa3.77□□□□□ -1.81
UBI4YLL039C HUT1Q12520 339 aa3.77□□□□□ -1.81
UBI4YLL039C ODC2Q99297 307 aa3.77□□□□□ -1.81
UBI4YLL039C PET20Q99373 253 aa3.77□□□□□ -1.81
UBI4YLL039C DFR1P07807 211 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
UBI4YLL039C RPS25BP0C0T4 108 aaKnown RBP3.76□□□□□ -1.81
UBI4YLL039C RFA3P26755 122 aaKnown RBP3.76□□□□□ -1.81
UBI4YLL039C ARO2P28777 376 aaKnown RBP3.76□□□□□ -1.81
UBI4YLL039C PAN3P36102 679 aaPredicted RBP3.76□□□□□ -1.81
UBI4YLL039C DOG1P38774 246 aa3.76□□□□□ -1.81
UBI4YLL039C GON7P46984 123 aa3.76□□□□□ -1.81
UBI4YLL039C XPT1P47165 209 aa3.76□□□□□ -1.81
UBI4YLL039C BXI1P48558 297 aa3.76□□□□□ -1.81
UBI4YLL039C YDL183CP48569 320 aa3.76□□□□□ -1.81
UBI4YLL039C BNS1P50084 137 aa3.76□□□□□ -1.81
UBI4YLL039C GEP7P53171 287 aa3.76□□□□□ -1.81
UBI4YLL039C YAP1802P53309 568 aa3.76□□□□□ -1.81
UBI4YLL039C YNR064CP53750 290 aa3.76□□□□□ -1.81
UBI4YLL039C FCY22Q12119 530 aa3.76□□□□□ -1.81
UBI4YLL039C FRE8Q12209 686 aa3.76□□□□□ -1.81
UBI4YLL039C YOR097CQ12274 175 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms