RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C QCR6P00127 147 aa0.85□□□□□ -2.27
RPL40BYKR094C RAD6P06104 172 aa0.85□□□□□ -2.27
RPL40BYKR094C YOL162WP0CF19 215 aa0.85□□□□□ -2.27
RPL40BYKR094C PBI2P0CT04 75 aaKnown RBP0.85□□□□□ -2.27
RPL40BYKR094C TIR1P10863 254 aa0.85□□□□□ -2.27
RPL40BYKR094C SEC11P15367 167 aa0.85□□□□□ -2.27
RPL40BYKR094C IDP1P21954 428 aaKnown RBP0.85□□□□□ -2.27
RPL40BYKR094C HSP30P25619 332 aa0.85□□□□□ -2.27
RPL40BYKR094C BUB2P26448 306 aaPredicted RBP0.85□□□□□ -2.27
RPL40BYKR094C GSP2P32836 220 aaKnown RBP0.85□□□□□ -2.27
RPL40BYKR094C NUF2P33895 451 aa0.85□□□□□ -2.27
RPL40BYKR094C SFK1P35735 353 aa0.85□□□□□ -2.27
RPL40BYKR094C FIG1P38224 298 aa0.85□□□□□ -2.27
RPL40BYKR094C YBR219CP38317 127 aa0.85□□□□□ -2.27
RPL40BYKR094C YER135CP40082 130 aa0.85□□□□□ -2.27
RPL40BYKR094C YPL073CP40323 161 aa0.85□□□□□ -2.27
RPL40BYKR094C TTI2P47168 421 aa0.85□□□□□ -2.27
RPL40BYKR094C SBH2P52871 88 aa0.85□□□□□ -2.27
RPL40BYKR094C MPC3P53311 146 aa0.85□□□□□ -2.27
RPL40BYKR094C POP3P53833 195 aaPredicted RBP0.85□□□□□ -2.27
RPL40BYKR094C YKR005CQ02203 525 aa0.85□□□□□ -2.27
RPL40BYKR094C PIR1Q03178 341 aa0.85□□□□□ -2.27
RPL40BYKR094C YPR127WQ06494 345 aa0.85□□□□□ -2.27
RPL40BYKR094C PRP11Q07350 266 aaPredicted RBP0.85□□□□□ -2.27
RPL40BYKR094C TRM3Q07527 1436 aa0.85□□□□□ -2.27
RPL40BYKR094C YPR013CQ12145 317 aa0.85□□□□□ -2.27
RPL40BYKR094C RDI1Q12434 202 aa0.85□□□□□ -2.27
RPL40BYKR094C FAS1P07149 2051 aaKnown RBP0.84□□□□□ -2.27
RPL40BYKR094C QCR8P08525 94 aa0.84□□□□□ -2.27
RPL40BYKR094C PEX34P25584 144 aa0.84□□□□□ -2.27
RPL40BYKR094C FMP23P38231 175 aa0.84□□□□□ -2.27
RPL40BYKR094C DER1P38307 211 aa0.84□□□□□ -2.27
RPL40BYKR094C YNL033WP53964 284 aa0.84□□□□□ -2.27
RPL40BYKR094C YDR391CQ04170 232 aa0.84□□□□□ -2.27
RPL40BYKR094C SMD2Q06217 110 aaKnown RBP0.84□□□□□ -2.27
RPL40BYKR094C NAT3Q06504 195 aa0.84□□□□□ -2.27
RPL40BYKR094C YLR046CQ12253 270 aa0.84□□□□□ -2.27
RPL40BYKR094C CYR1P08678 2026 aaKnown RBP0.83□□□□□ -2.28
RPL40BYKR094C GPA2P10823 449 aa0.83□□□□□ -2.28
RPL40BYKR094C PTC1P35182 281 aa0.83□□□□□ -2.28
RPL40BYKR094C YKR045CP36138 183 aa0.83□□□□□ -2.28
RPL40BYKR094C YBR220CP38318 560 aa0.83□□□□□ -2.28
RPL40BYKR094C YAP3P38749 330 aa0.83□□□□□ -2.28
RPL40BYKR094C EDC3P39998 551 aaKnown RBP0.83□□□□□ -2.28
RPL40BYKR094C YGL101WP53144 215 aa0.83□□□□□ -2.28
RPL40BYKR094C HHT1P61830 136 aa0.83□□□□□ -2.28
RPL40BYKR094C RCE1Q03530 315 aa0.83□□□□□ -2.28
RPL40BYKR094C UPS3Q04006 179 aa0.83□□□□□ -2.28
RPL40BYKR094C THI74Q04083 370 aa0.83□□□□□ -2.28
RPL40BYKR094C GAL83Q04739 417 aa0.83□□□□□ -2.28
RPL40BYKR094C FYV12Q08559 129 aa0.83□□□□□ -2.28
RPL40BYKR094C DAS2Q12084 232 aa0.83□□□□□ -2.28
RPL40BYKR094C YOR015WQ12169 119 aa0.83□□□□□ -2.28
RPL40BYKR094C PET20Q99373 253 aa0.83□□□□□ -2.28
RPL40BYKR094C UBR2Q07963 1872 aa0.83□□□□□ -2.28
RPL40BYKR094C YLR422WQ06409 1932 aa0.83□□□□□ -2.28
RPL40BYKR094C MSB2P32334 1306 aa0.83□□□□□ -2.28
RPL40BYKR094C MDM35O60200 86 aa0.82□□□□□ -2.28
RPL40BYKR094C YCR023CP25351 611 aa0.82□□□□□ -2.28
RPL40BYKR094C SRP102P36057 244 aaPredicted RBP0.82□□□□□ -2.28
RPL40BYKR094C RRT1P38192 103 aa0.82□□□□□ -2.28
RPL40BYKR094C RPL13BP40212 199 aaKnown RBP0.82□□□□□ -2.28
RPL40BYKR094C DLS1P40366 167 aa0.82□□□□□ -2.28
RPL40BYKR094C YGL193CP53097 103 aa0.82□□□□□ -2.28
RPL40BYKR094C LSM3P57743 89 aaKnown RBP0.82□□□□□ -2.28
RPL40BYKR094C DAD4P69851 72 aa0.82□□□□□ -2.28
RPL40BYKR094C HSK3P69852 69 aa0.82□□□□□ -2.28
RPL40BYKR094C RAV2Q03956 351 aa0.82□□□□□ -2.28
RPL40BYKR094C YLR162WQ06235 118 aa0.82□□□□□ -2.28
RPL40BYKR094C CSI2Q08054 341 aa0.82□□□□□ -2.28
RPL40BYKR094C UIP4Q08926 304 aa0.82□□□□□ -2.28
RPL40BYKR094C NSL1Q12143 216 aa0.82□□□□□ -2.28
RPL40BYKR094C ATP20Q12233 115 aa0.82□□□□□ -2.28
RPL40BYKR094C RPL13AQ12690 199 aaPredicted RBP0.82□□□□□ -2.28
RPL40BYKR094C EFG1Q3E705 233 aaKnown RBP0.82□□□□□ -2.28
RPL40BYKR094C YOR1P53049 1477 aa0.81□□□□□ -2.28
RPL40BYKR094C COX8P04039 78 aa0.81□□□□□ -2.28
RPL40BYKR094C ATP5P09457 212 aa0.81□□□□□ -2.28
RPL40BYKR094C UBI4P0CG63 381 aaKnown RBP0.81□□□□□ -2.28
RPL40BYKR094C RPL2AP0CX45 254 aaKnown RBP0.81□□□□□ -2.28
RPL40BYKR094C RPL2BP0CX46 254 aaKnown RBP0.81□□□□□ -2.28
RPL40BYKR094C PET54P10834 293 aa0.81□□□□□ -2.28
RPL40BYKR094C RPL30P14120 105 aaKnown RBP0.81□□□□□ -2.28
RPL40BYKR094C FPR1P20081 114 aaKnown RBP0.81□□□□□ -2.28
RPL40BYKR094C YGL010WP25338 174 aa0.81□□□□□ -2.28
RPL40BYKR094C YHL018WP38744 120 aaPredicted RBP0.81□□□□□ -2.28
RPL40BYKR094C VMA22P38784 181 aa0.81□□□□□ -2.28
RPL40BYKR094C YEL028WP39989 153 aa0.81□□□□□ -2.28
RPL40BYKR094C SOK1P40317 901 aa0.81□□□□□ -2.28
RPL40BYKR094C MOB1P40484 314 aa0.81□□□□□ -2.28
RPL40BYKR094C APQ12P40532 138 aa0.81□□□□□ -2.28
RPL40BYKR094C ALB1P47019 175 aaPredicted RBP0.81□□□□□ -2.28
RPL40BYKR094C SOL1P50278 321 aa0.81□□□□□ -2.28
RPL40BYKR094C MET31Q03081 177 aa0.81□□□□□ -2.28
RPL40BYKR094C LIP1Q03579 150 aa0.81□□□□□ -2.28
RPL40BYKR094C RRP17Q04031 235 aaPredicted RBP0.81□□□□□ -2.28
RPL40BYKR094C SYM1Q06563 197 aa0.81□□□□□ -2.28
RPL40BYKR094C YPD1Q07688 167 aa0.81□□□□□ -2.28
RPL40BYKR094C YPR202WQ08993 238 aa0.81□□□□□ -2.28
RPL40BYKR094C YNL146C-AQ3E7Z1 64 aa0.81□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms