RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C YEL009C-AA0A023PZF2 135 aa3.42□□□□□ -1.86
SRP40YKR092C COX4P04037 155 aa3.42□□□□□ -1.86
SRP40YKR092C MRS1P07266 363 aa3.42□□□□□ -1.86
SRP40YKR092C YOL163WP0CF20 169 aa3.42□□□□□ -1.86
SRP40YKR092C INO4P13902 151 aa3.42□□□□□ -1.86
SRP40YKR092C HSP26P15992 214 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SRP40YKR092C EMP24P32803 203 aaKnown RBP3.42□□□□□ -1.86
SRP40YKR092C MDM31P38880 579 aa3.42□□□□□ -1.86
SRP40YKR092C RPB11P38902 120 aa3.42□□□□□ -1.86
SRP40YKR092C YPL073CP40323 161 aa3.42□□□□□ -1.86
SRP40YKR092C POP1P41812 875 aa3.42□□□□□ -1.86
SRP40YKR092C SDT1P53078 280 aa3.42□□□□□ -1.86
SRP40YKR092C PRM8P53174 237 aa3.42□□□□□ -1.86
SRP40YKR092C YGR015CP53208 328 aa3.42□□□□□ -1.86
SRP40YKR092C CLD1P53264 445 aa3.42□□□□□ -1.86
SRP40YKR092C INP1Q03694 420 aa3.42□□□□□ -1.86
SRP40YKR092C RPC11Q04307 110 aaPredicted RBP3.42□□□□□ -1.86
SRP40YKR092C YLR042CQ07990 161 aa3.42□□□□□ -1.86
SRP40YKR092C YOR376WQ08900 122 aa3.42□□□□□ -1.86
SRP40YKR092C BSC1Q12140 328 aa3.42□□□□□ -1.86
SRP40YKR092C ATG5Q12380 294 aa3.42□□□□□ -1.86
SRP40YKR092C EAF3Q12432 401 aa3.42□□□□□ -1.86
SRP40YKR092C YLR412C-AQ3E742 68 aa3.42□□□□□ -1.86
SRP40YKR092C YNL277W-AQ3E7Z0 62 aa3.42□□□□□ -1.86
SRP40YKR092C MHF1Q3E835 90 aa3.42□□□□□ -1.86
SRP40YKR092C ISD11Q6Q560 94 aa3.42□□□□□ -1.86
SRP40YKR092C IGO2Q9P305 131 aa3.42□□□□□ -1.86
SRP40YKR092C HEM2P05373 342 aa3.41□□□□□ -1.86
SRP40YKR092C RPL20AP0CX23 172 aaKnown RBP3.41□□□□□ -1.86
SRP40YKR092C RPL20BP0CX24 172 aaPredicted RBP3.41□□□□□ -1.86
SRP40YKR092C RPL12AP0CX53 165 aaKnown RBP3.41□□□□□ -1.86
SRP40YKR092C RPL12BP0CX54 165 aa3.41□□□□□ -1.86
SRP40YKR092C MXR2P25566 168 aa3.41□□□□□ -1.86
SRP40YKR092C TOA2P32774 122 aa3.41□□□□□ -1.86
SRP40YKR092C MRPS5P33759 307 aa3.41□□□□□ -1.86
SRP40YKR092C MRPL11P36521 249 aaPredicted RBP3.41□□□□□ -1.86
SRP40YKR092C YHR177WP38867 453 aa3.41□□□□□ -1.86
SRP40YKR092C YND1P40009 630 aa3.41□□□□□ -1.86
SRP40YKR092C YER079WP40052 210 aaKnown RBP3.41□□□□□ -1.86
SRP40YKR092C THG1P53215 237 aaKnown RBP3.41□□□□□ -1.86
SRP40YKR092C SAY1P53324 424 aa3.41□□□□□ -1.86
SRP40YKR092C YIF1P53845 314 aaKnown RBP3.41□□□□□ -1.86
SRP40YKR092C SPR6Q01684 191 aa3.41□□□□□ -1.86
SRP40YKR092C YMR166CQ03829 368 aa3.41□□□□□ -1.86
SRP40YKR092C YPQ1Q12010 308 aa3.41□□□□□ -1.86
SRP40YKR092C MCT1Q12283 360 aa3.41□□□□□ -1.86
SRP40YKR092C HUT1Q12520 339 aa3.41□□□□□ -1.86
SRP40YKR092C RIF1P29539 1916 aa3.4□□□□□ -1.86
SRP40YKR092C MSW1P04803 379 aa3.4□□□□□ -1.87
SRP40YKR092C SIR2P06700 562 aa3.4□□□□□ -1.87
SRP40YKR092C RPL2AP0CX45 254 aaKnown RBP3.4□□□□□ -1.87
SRP40YKR092C RPL2BP0CX46 254 aaKnown RBP3.4□□□□□ -1.87
SRP40YKR092C UBC5P15732 148 aa3.4□□□□□ -1.87
SRP40YKR092C ARF2P19146 181 aaKnown RBP3.4□□□□□ -1.87
SRP40YKR092C TIP1P27654 210 aaPredicted RBP3.4□□□□□ -1.87
SRP40YKR092C MKK1P32490 508 aa3.4□□□□□ -1.87
SRP40YKR092C COX13P32799 129 aa3.4□□□□□ -1.87
SRP40YKR092C CLB6P32943 380 aa3.4□□□□□ -1.87
SRP40YKR092C MRP21P38175 177 aa3.4□□□□□ -1.87
SRP40YKR092C ARN2P38724 620 aa3.4□□□□□ -1.87
SRP40YKR092C CAT5P41735 233 aa3.4□□□□□ -1.87
SRP40YKR092C PAM16P42949 149 aa3.4□□□□□ -1.87
SRP40YKR092C LCB3P47013 409 aa3.4□□□□□ -1.87
SRP40YKR092C CAB4P53332 305 aa3.4□□□□□ -1.87
SRP40YKR092C PGA1P53896 198 aa3.4□□□□□ -1.87
SRP40YKR092C VPS71Q03433 280 aa3.4□□□□□ -1.87
SRP40YKR092C GAS3Q03655 524 aa3.4□□□□□ -1.87
SRP40YKR092C SEN15Q04675 128 aa3.4□□□□□ -1.87
SRP40YKR092C SHH4Q06236 168 aa3.4□□□□□ -1.87
SRP40YKR092C LOA1Q06508 300 aa3.4□□□□□ -1.87
SRP40YKR092C PBP4Q07362 185 aaKnown RBP3.4□□□□□ -1.87
SRP40YKR092C RRS1Q08746 203 aaKnown RBP3.4□□□□□ -1.87
SRP40YKR092C YPL247CQ12523 523 aa3.4□□□□□ -1.87
SRP40YKR092C CSR2Q12734 1121 aa3.4□□□□□ -1.87
SRP40YKR092C MHF2Q3E829 80 aa3.4□□□□□ -1.87
SRP40YKR092C MSI1P13712 422 aa3.39□□□□□ -1.87
SRP40YKR092C QRI5P32344 111 aa3.39□□□□□ -1.87
SRP40YKR092C MSN2P33748 704 aa3.39□□□□□ -1.87
SRP40YKR092C TMA19P35691 167 aaKnown RBP3.39□□□□□ -1.87
SRP40YKR092C GPX2P38143 162 aa3.39□□□□□ -1.87
SRP40YKR092C YEL028WP39989 153 aa3.39□□□□□ -1.87
SRP40YKR092C AVT7P40501 490 aa3.39□□□□□ -1.87
SRP40YKR092C YIA6P40556 373 aa3.39□□□□□ -1.87
SRP40YKR092C EGT2P42835 1041 aa3.39□□□□□ -1.87
SRP40YKR092C ATG18P43601 500 aa3.39□□□□□ -1.87
SRP40YKR092C EAF6P47128 113 aa3.39□□□□□ -1.87
SRP40YKR092C TTI2P47168 421 aa3.39□□□□□ -1.87
SRP40YKR092C BOL2P53082 120 aa3.39□□□□□ -1.87
SRP40YKR092C WSC2P53832 503 aa3.39□□□□□ -1.87
SRP40YKR092C TDA7P53882 636 aaPredicted RBP3.39□□□□□ -1.87
SRP40YKR092C SLG1P54867 378 aa3.39□□□□□ -1.87
SRP40YKR092C RSM10Q03201 203 aa3.39□□□□□ -1.87
SRP40YKR092C YPR098CQ06089 161 aa3.39□□□□□ -1.87
SRP40YKR092C THP1Q08231 455 aa3.39□□□□□ -1.87
SRP40YKR092C NCE102Q12207 173 aaRIP-Chip data3.39□□□□□ -1.87not detected
SRP40YKR092C YIL134C-AQ45U18 67 aa3.39□□□□□ -1.87
SRP40YKR092C SUS1Q6WNK7 96 aa3.39□□□□□ -1.87
SRP40YKR092C ADH3P07246 375 aaKnown RBP3.38□□□□□ -1.87
SRP40YKR092C YPR170W-BP0C5R9 85 aa3.38□□□□□ -1.87
SRP40YKR092C HMRA1P0CY11 126 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms