RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W GLE2P40066 365 aa1.6□□□□□ -2.15
SSF1YHR066W ICE2P40499 491 aa1.6□□□□□ -2.15
SSF1YHR066W YFH7P43591 353 aa1.6□□□□□ -2.15
SSF1YHR066W GON7P46984 123 aa1.6□□□□□ -2.15
SSF1YHR066W ARP3P47117 449 aaKnown RBP1.6□□□□□ -2.15
SSF1YHR066W ARO8P53090 500 aaKnown RBP1.6□□□□□ -2.15
SSF1YHR066W HSK3P69852 69 aa1.6□□□□□ -2.15
SSF1YHR066W AIM34Q03673 198 aa1.6□□□□□ -2.15
SSF1YHR066W YDR249CQ03787 373 aa1.6□□□□□ -2.15
SSF1YHR066W ATG39Q06159 398 aa1.6□□□□□ -2.15
SSF1YHR066W MCP1Q12106 302 aa1.6□□□□□ -2.15
SSF1YHR066W PEX11Q12462 236 aa1.6□□□□□ -2.15
SSF1YHR066W RPS28AQ3E7X9 67 aaPredicted RBP1.6□□□□□ -2.15
SSF1YHR066W BEM2P39960 2167 aaKnown RBP1.6□□□□□ -2.15
SSF1YHR066W REP2P03872 296 aa1.59□□□□□ -2.15
SSF1YHR066W Q0255P03881 472 aa1.59□□□□□ -2.15
SSF1YHR066W RPL9AP05738 191 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W RPL26AP05743 127 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W ADH3P07246 375 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W RPB3P16370 318 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W SEC14P24280 304 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W YCR023CP25351 611 aa1.59□□□□□ -2.15
SSF1YHR066W CLB6P32943 380 aa1.59□□□□□ -2.15
SSF1YHR066W SRP102P36057 244 aaPredicted RBP1.59□□□□□ -2.15
SSF1YHR066W ARC15P40518 154 aaRIP-Chip data1.59□□□□□ -2.15not detected
SSF1YHR066W MNN5P46982 586 aa1.59□□□□□ -2.15
SSF1YHR066W YJR111CP47148 283 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W RPL9BP51401 191 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W SBH2P52871 88 aa1.59□□□□□ -2.15
SSF1YHR066W RPL26BP53221 127 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W NQM1P53228 333 aaPredicted RBP1.59□□□□□ -2.15
SSF1YHR066W SWP1Q02795 286 aa1.59□□□□□ -2.15
SSF1YHR066W GPI17Q04080 534 aa1.59□□□□□ -2.15
SSF1YHR066W HPT1Q04178 221 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W TRM12Q04235 462 aa1.59□□□□□ -2.15
SSF1YHR066W HNT1Q04344 158 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W DYN3Q04949 312 aa1.59□□□□□ -2.15
SSF1YHR066W SHH4Q06236 168 aa1.59□□□□□ -2.15
SSF1YHR066W SUE1Q06524 206 aa1.59□□□□□ -2.15
SSF1YHR066W PSF1Q12488 208 aa1.59□□□□□ -2.15
SSF1YHR066W UTP20P35194 2493 aaKnown RBP1.59□□□□□ -2.15
SSF1YHR066W CDC8P00572 216 aa1.59□□□□□ -2.16
SSF1YHR066W BET1P22804 142 aa1.59□□□□□ -2.16
SSF1YHR066W SCO1P23833 295 aa1.59□□□□□ -2.16
SSF1YHR066W UBC8P28263 218 aa1.59□□□□□ -2.16
SSF1YHR066W MDH3P32419 343 aaKnown RBP RIP-Chip data1.59□□□□□ -2.16not detected
SSF1YHR066W YKL102CP34249 101 aa1.59□□□□□ -2.16
SSF1YHR066W SKG1P36169 355 aa1.59□□□□□ -2.16
SSF1YHR066W CTR2P38865 189 aa1.59□□□□□ -2.16
SSF1YHR066W SMD3P43321 101 aaKnown RBP1.59□□□□□ -2.16
SSF1YHR066W SKI6P46948 246 aaPredicted RBP1.59□□□□□ -2.16
SSF1YHR066W DSK2P48510 373 aa1.59□□□□□ -2.16
SSF1YHR066W CAB4P53332 305 aa1.59□□□□□ -2.16
SSF1YHR066W COS6P53344 381 aa1.59□□□□□ -2.16
SSF1YHR066W PGA1P53896 198 aa1.59□□□□□ -2.16
SSF1YHR066W YPR127WQ06494 345 aa1.59□□□□□ -2.16
SSF1YHR066W DGA1Q08650 418 aa1.59□□□□□ -2.16
SSF1YHR066W MPD1Q12404 318 aaKnown RBP1.59□□□□□ -2.16
SSF1YHR066W MHT1Q12525 324 aa1.59□□□□□ -2.16
SSF1YHR066W EFG1Q3E705 233 aaKnown RBP1.59□□□□□ -2.16
SSF1YHR066W YDR034W-BQ6Q5X2 51 aa1.59□□□□□ -2.16
SSF1YHR066W YLR422WQ06409 1932 aa1.58□□□□□ -2.16
SSF1YHR066W URA5P13298 226 aaKnown RBP1.58□□□□□ -2.16
SSF1YHR066W ATP15P21306 62 aa1.58□□□□□ -2.16
SSF1YHR066W MRPS28P21771 286 aa1.58□□□□□ -2.16
SSF1YHR066W KDX1P36005 433 aa1.58□□□□□ -2.16
SSF1YHR066W TVP38P36164 337 aa1.58□□□□□ -2.16
SSF1YHR066W MOG1P47123 218 aa1.58□□□□□ -2.16
SSF1YHR066W MPA43P53583 542 aaPredicted RBP1.58□□□□□ -2.16
SSF1YHR066W CGI121Q03705 181 aaKnown RBP1.58□□□□□ -2.16
SSF1YHR066W PLP1Q04004 230 aa1.58□□□□□ -2.16
SSF1YHR066W YLR031WQ07978 186 aa1.58□□□□□ -2.16
SSF1YHR066W SAS5Q99314 248 aa1.58□□□□□ -2.16
SSF1YHR066W BRR2P32639 2163 aaKnown RBP1.57□□□□□ -2.16
SSF1YHR066W YHR032W-AP0C5N6 59 aa1.57□□□□□ -2.16
SSF1YHR066W PET54P10834 293 aa1.57□□□□□ -2.16
SSF1YHR066W OCH1P31755 480 aa1.57□□□□□ -2.16
SSF1YHR066W SLM6P38343 150 aa1.57□□□□□ -2.16
SSF1YHR066W TIF34P40217 347 aaKnown RBP1.57□□□□□ -2.16
SSF1YHR066W SOK1P40317 901 aa1.57□□□□□ -2.16
SSF1YHR066W PRM10P42946 383 aa1.57□□□□□ -2.16
SSF1YHR066W TDA4P47153 279 aa1.57□□□□□ -2.16
SSF1YHR066W YGR026WP53217 278 aa1.57□□□□□ -2.16
SSF1YHR066W MAK3Q03503 176 aa1.57□□□□□ -2.16
SSF1YHR066W SPC2Q04969 178 aa1.57□□□□□ -2.16
SSF1YHR066W ARR2Q06597 130 aa1.57□□□□□ -2.16
SSF1YHR066W YPR014CQ6B0W2 109 aa1.57□□□□□ -2.16
SSF1YHR066W TIM9O74700 87 aa1.56□□□□□ -2.16
SSF1YHR066W CKS1P20486 150 aaKnown RBP1.56□□□□□ -2.16
SSF1YHR066W CCA1P21269 546 aa1.56□□□□□ -2.16
SSF1YHR066W SER2P42941 309 aa1.56□□□□□ -2.16
SSF1YHR066W SNX4P47057 423 aa1.56□□□□□ -2.16
SSF1YHR066W SOL1P50278 321 aa1.56□□□□□ -2.16
SSF1YHR066W AKR2Q12013 749 aa1.56□□□□□ -2.16
SSF1YHR066W YLR046CQ12253 270 aa1.56□□□□□ -2.16
SSF1YHR066W PDR18P53756 1333 aa1.55□□□□□ -2.16
SSF1YHR066W RPL40AP0CH08 128 aaKnown RBP1.55□□□□□ -2.16
SSF1YHR066W RPL40BP0CH09 128 aaKnown RBP1.55□□□□□ -2.16
SSF1YHR066W SPO13P23624 291 aa1.55□□□□□ -2.16
SSF1YHR066W BUB2P26448 306 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 141.5 ms