RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	YDL183C	P48569	320 aa		4	□□□□□ -1.77
RSC30	YHR056C	YOR011W-A	Q3E807	68 aa		4	□□□□□ -1.77
RSC30	YHR056C	ANB1	P19211	157 aa		3.99	□□□□□ -1.77
RSC30	YHR056C	AVT5	P38176	459 aa		3.99	□□□□□ -1.77
RSC30	YHR056C	CAT5	P41735	233 aa		3.99	□□□□□ -1.77
RSC30	YHR056C	RBL2	P48606	106 aa	Known RBP	3.99	□□□□□ -1.77
RSC30	YHR056C	YGR018C	P53211	109 aa		3.99	□□□□□ -1.77
RSC30	YHR056C	FMP41	P53889	259 aa	Known RBP	3.99	□□□□□ -1.77
RSC30	YHR056C	PAA1	Q12447	191 aa	Known RBP	3.99	□□□□□ -1.77
RSC30	YHR056C	CSH1	P38287	376 aa		3.98	□□□□□ -1.77
RSC30	YHR056C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	RIP-Chip
RSC30	YHR056C	MIT1	P40002	666 aa		3.98	□□□□□ -1.77
RSC30	YHR056C	ILM1	P47155	203 aa		3.98	□□□□□ -1.77
RSC30	YHR056C	MET17	P06106	444 aa		3.98	□□□□□ -1.77
RSC30	YHR056C	ERV15	P38312	142 aa		3.98	□□□□□ -1.77
RSC30	YHR056C	IRC22	P40006	225 aa		3.98	□□□□□ -1.77
RSC30	YHR056C	HXT14	P42833	540 aa		3.98	□□□□□ -1.77
RSC30	YHR056C	MAK3	Q03503	176 aa		3.98	□□□□□ -1.77
RSC30	YHR056C	FRQ1	Q06389	190 aa		3.98	□□□□□ -1.77
RSC30	YHR056C	UBC7	Q02159	165 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	CCW12	Q12127	133 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	YGR240C-A	Q3E786	66 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	QCR2	P07257	368 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	YCR022C	P25620	114 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	MRP17	P28778	131 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	SIT1	P39980	628 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	YGR050C	P53231	118 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	YLR031W	Q07978	186 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	ENV7	Q12003	364 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	CRC1	Q12289	327 aa		3.97	□□□□□ -1.77
RSC30	YHR056C	MBA1	P38300	278 aa		3.96	□□□□□ -1.78
RSC30	YHR056C	YHR213W	P0CI67	198 aa		3.96	□□□□□ -1.78
RSC30	YHR056C	YCR025C	P25352	136 aa		3.96	□□□□□ -1.78
RSC30	YHR056C	YER135C	P40082	130 aa		3.96	□□□□□ -1.78
RSC30	YHR056C	LCL2	Q08045	131 aa		3.96	□□□□□ -1.78
RSC30	YHR056C	YPL225W	Q08971	146 aa	Known RBP	3.96	□□□□□ -1.78
RSC30	YHR056C	YBR255C-A	Q3E776	120 aa		3.96	□□□□□ -1.78
RSC30	YHR056C	YCR001W	P25347	104 aa		3.95	□□□□□ -1.78
RSC30	YHR056C	RPL13B	P40212	199 aa	Known RBP	3.95	□□□□□ -1.78
RSC30	YHR056C	PRM7	Q12459	698 aa		3.95	□□□□□ -1.78
RSC30	YHR056C	RPL13A	Q12690	199 aa	Predicted RBP	3.95	□□□□□ -1.78
RSC30	YHR056C	YPR145C-A	Q2V2P0	78 aa		3.95	□□□□□ -1.78
RSC30	YHR056C	HTD2	P38790	280 aa	Known RBP	3.95	□□□□□ -1.78
RSC30	YHR056C	DYN2	Q02647	92 aa		3.95	□□□□□ -1.78
RSC30	YHR056C	COA4	Q05809	96 aa		3.95	□□□□□ -1.78
RSC30	YHR056C	YOR283W	Q12040	230 aa	Known RBP	3.95	□□□□□ -1.78
RSC30	YHR056C	RPL11A	P0C0W9	174 aa	Known RBP	3.94	□□□□□ -1.78
RSC30	YHR056C	IES5	P40060	125 aa		3.94	□□□□□ -1.78
RSC30	YHR056C	IMP2	P46972	177 aa		3.94	□□□□□ -1.78
RSC30	YHR056C	YJR096W	P47137	282 aa		3.94	□□□□□ -1.78
RSC30	YHR056C	GTF1	P53260	183 aa	Predicted RBP	3.94	□□□□□ -1.78
RSC30	YHR056C	HST4	P53688	370 aa		3.94	□□□□□ -1.78
RSC30	YHR056C	RPL11B	Q3E757	174 aa	Predicted RBP	3.94	□□□□□ -1.78
RSC30	YHR056C	SUS1	Q6WNK7	96 aa		3.94	□□□□□ -1.78
RSC30	YHR056C	ELF1	P36053	145 aa		3.94	□□□□□ -1.78
RSC30	YHR056C	WSS1	P38838	269 aa		3.94	□□□□□ -1.78
RSC30	YHR056C	YPR195C	Q06594	109 aa		3.94	□□□□□ -1.78
RSC30	YHR056C	COS8	P38723	381 aa		3.93	□□□□□ -1.78
RSC30	YHR056C	SNU13	P39990	126 aa	Known RBP	3.93	□□□□□ -1.78
RSC30	YHR056C	LST7	P53237	242 aa		3.93	□□□□□ -1.78
RSC30	YHR056C	TY1A-MR1	Q04215	440 aa		3.93	□□□□□ -1.78
RSC30	YHR056C	ATG5	Q12380	294 aa		3.93	□□□□□ -1.78
RSC30	YHR056C	DFM1	Q12743	341 aa	Known RBP	3.93	□□□□□ -1.78
RSC30	YHR056C	PIS1	P06197	220 aa	Known RBP	3.93	□□□□□ -1.78
RSC30	YHR056C	IZH1	Q03419	316 aa		3.93	□□□□□ -1.78
RSC30	YHR056C	YJL197C-A	P0C5P0	93 aa		3.92	□□□□□ -1.78
RSC30	YHR056C	EMP24	P32803	203 aa	Known RBP	3.92	□□□□□ -1.78
RSC30	YHR056C	POP8	P38208	133 aa		3.92	□□□□□ -1.78
RSC30	YHR056C	VHS2	P40463	436 aa		3.92	□□□□□ -1.78
RSC30	YHR056C	CWC23	P52868	283 aa	Predicted RBP	3.92	□□□□□ -1.78
RSC30	YHR056C	ORM2	Q06144	216 aa		3.92	□□□□□ -1.78
RSC30	YHR056C	YCT1	Q12235	531 aa		3.92	□□□□□ -1.78
RSC30	YHR056C	CDC7	P06243	507 aa		3.92	□□□□□ -1.78
RSC30	YHR056C	GLE2	P40066	365 aa		3.92	□□□□□ -1.78
RSC30	YHR056C	YIR035C	P40579	254 aa		3.92	□□□□□ -1.78
RSC30	YHR056C	YCH1	P42937	148 aa		3.92	□□□□□ -1.78
RSC30	YHR056C	YPL264C	Q08980	353 aa		3.92	□□□□□ -1.78
RSC30	YHR056C	RRF1	P38771	230 aa		3.91	□□□□□ -1.78
RSC30	YHR056C	AIM24	P47127	394 aa		3.91	□□□□□ -1.78
RSC30	YHR056C	NIF3	P53081	288 aa		3.91	□□□□□ -1.78
RSC30	YHR056C	HCH1	P53834	153 aa		3.91	□□□□□ -1.78
RSC30	YHR056C	TY1A-DR2	Q03964	440 aa	Known RBP	3.91	□□□□□ -1.78
RSC30	YHR056C	YLR042C	Q07990	161 aa		3.91	□□□□□ -1.78
RSC30	YHR056C	MRP2	P10663	115 aa	Predicted RBP	3.9	□□□□□ -1.78
RSC30	YHR056C	URA5	P13298	226 aa	Known RBP	3.9	□□□□□ -1.78
RSC30	YHR056C	SAS2	P40963	338 aa		3.9	□□□□□ -1.78
RSC30	YHR056C	LCB3	P47013	409 aa		3.9	□□□□□ -1.78
RSC30	YHR056C	YKL162C	P36052	402 aa		3.9	□□□□□ -1.79
RSC30	YHR056C	RTC6	O14464	93 aa		3.89	□□□□□ -1.79
RSC30	YHR056C	DDI2	P0CH63	225 aa		3.89	□□□□□ -1.79
RSC30	YHR056C	DDI3	P0CH64	225 aa		3.89	□□□□□ -1.79
RSC30	YHR056C	CDC40	P40968	455 aa	Predicted RBP	3.89	□□□□□ -1.79
RSC30	YHR056C	AIM25	P47140	327 aa		3.89	□□□□□ -1.79
RSC30	YHR056C	YLR224W	Q05947	369 aa		3.89	□□□□□ -1.79
RSC30	YHR056C	RNP1	P32385	249 aa		3.89	□□□□□ -1.79
RSC30	YHR056C	PAN3	P36102	679 aa	Predicted RBP	3.89	□□□□□ -1.79
RSC30	YHR056C	YPC1	P38298	316 aa		3.89	□□□□□ -1.79
RSC30	YHR056C	YOL160W	Q08321	113 aa		3.89	□□□□□ -1.79
RSC30	YHR056C	MRPL4	P36517	319 aa		3.88	□□□□□ -1.79
RSC30	YHR056C	YHR022C	P38763	256 aa		3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms