RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C YDL085C-AQ3E7B7 68 aaKnown RBP1.07□□□□□ -2.24
CUP1-2YHR055C YBR242WP38331 238 aa1.06□□□□□ -2.24
CUP1-2YHR055C NSG1P38837 291 aa1.06□□□□□ -2.24
CUP1-2YHR055C GPI14P47088 403 aaKnown RBP1.06□□□□□ -2.24
CUP1-2YHR055C SBH2P52871 88 aa1.06□□□□□ -2.24
CUP1-2YHR055C GRX5Q02784 150 aa1.06□□□□□ -2.24
CUP1-2YHR055C YPR203WQ08994 102 aa1.06□□□□□ -2.24
CUP1-2YHR055C YLR412C-AQ3E742 68 aa1.06□□□□□ -2.24
CUP1-2YHR055C YLR422WQ06409 1932 aa1.05□□□□□ -2.24
CUP1-2YHR055C MAK5P38112 773 aaPredicted RBP1.05□□□□□ -2.24
CUP1-2YHR055C NSA2P40078 261 aaKnown RBP1.05□□□□□ -2.24
CUP1-2YHR055C DGK1Q12382 290 aa1.05□□□□□ -2.24
CUP1-2YHR055C TRX3P25372 127 aa1.04□□□□□ -2.24
CUP1-2YHR055C TAH1P25638 111 aaPredicted RBP1.04□□□□□ -2.24
CUP1-2YHR055C SBH1P52870 82 aa1.04□□□□□ -2.24
CUP1-2YHR055C YGL235WP53071 178 aa1.04□□□□□ -2.24
CUP1-2YHR055C NRK1P53915 240 aa1.04□□□□□ -2.24
CUP1-2YHR055C FYV12Q08559 129 aa1.04□□□□□ -2.24
CUP1-2YHR055C TAR1Q8TGM6 124 aa1.04□□□□□ -2.24
CUP1-2YHR055C ADE1P27616 306 aa1.03□□□□□ -2.24
CUP1-2YHR055C CAF4P36130 643 aa1.03□□□□□ -2.24
CUP1-2YHR055C YHL037CP38733 133 aa1.03□□□□□ -2.24
CUP1-2YHR055C PGA1P53896 198 aa1.03□□□□□ -2.24
CUP1-2YHR055C AIM34Q03673 198 aa1.03□□□□□ -2.24
CUP1-2YHR055C DAS2Q12084 232 aa1.03□□□□□ -2.24
CUP1-2YHR055C UGX2P32772 223 aa1.02□□□□□ -2.25
CUP1-2YHR055C YBL010CP32788 280 aa1.02□□□□□ -2.25
CUP1-2YHR055C YFL051CP43552 160 aa1.02□□□□□ -2.25
CUP1-2YHR055C NOC4Q06512 552 aaPredicted RBP1.02□□□□□ -2.25
CUP1-2YHR055C ATP20Q12233 115 aa1.02□□□□□ -2.25
CUP1-2YHR055C PST2Q12335 198 aaKnown RBP1.02□□□□□ -2.25
CUP1-2YHR055C YIL102CP40488 101 aa1.01□□□□□ -2.25
CUP1-2YHR055C FIT1Q04433 528 aa1.01□□□□□ -2.25
CUP1-2YHR055C YMR030W-AQ3E760 96 aa1.01□□□□□ -2.25
CUP1-2YHR055C RAD9P14737 1309 aa1□□□□□ -2.25
CUP1-2YHR055C JIP3O13555 125 aa1□□□□□ -2.25
CUP1-2YHR055C MPM1P40364 252 aa1□□□□□ -2.25
CUP1-2YHR055C UPS1Q05776 175 aa1□□□□□ -2.25
CUP1-2YHR055C MPD1Q12404 318 aaKnown RBP1□□□□□ -2.25
CUP1-2YHR055C DUR1,2P32528 1835 aaKnown RBP1□□□□□ -2.25
CUP1-2YHR055C FMP49A0A023PZB3 126 aa0.99□□□□□ -2.25
CUP1-2YHR055C ETR1P38071 380 aa0.99□□□□□ -2.25
CUP1-2YHR055C RRT1P38192 103 aa0.99□□□□□ -2.25
CUP1-2YHR055C NSE4P43124 402 aa0.99□□□□□ -2.25
CUP1-2YHR055C HHT1P61830 136 aa0.99□□□□□ -2.25
CUP1-2YHR055C YHP1Q04116 353 aa0.99□□□□□ -2.25
CUP1-2YHR055C YAR064WP39563 99 aa0.98□□□□□ -2.25
CUP1-2YHR055C FMP32P43557 207 aa0.98□□□□□ -2.25
CUP1-2YHR055C DML1Q03652 475 aa0.98□□□□□ -2.25
CUP1-2YHR055C ATG41Q12048 136 aa0.98□□□□□ -2.25
CUP1-2YHR055C DCV1P43595 202 aa0.97□□□□□ -2.25
CUP1-2YHR055C GAL83Q04739 417 aa0.97□□□□□ -2.25
CUP1-2YHR055C MAK31P23059 88 aa0.96□□□□□ -2.26
CUP1-2YHR055C HSP30P25619 332 aa0.96□□□□□ -2.26
CUP1-2YHR055C AHC2P25649 128 aa0.96□□□□□ -2.26
CUP1-2YHR055C SHG1P38337 142 aa0.96□□□□□ -2.26
CUP1-2YHR055C VPS28Q02767 242 aa0.96□□□□□ -2.26
CUP1-2YHR055C ELP6Q04868 273 aa0.96□□□□□ -2.26
CUP1-2YHR055C GRX8Q05926 109 aa0.96□□□□□ -2.26
CUP1-2YHR055C SHH4Q06236 168 aa0.96□□□□□ -2.26
CUP1-2YHR055C CCS1P40202 249 aaKnown RBP0.95□□□□□ -2.26
CUP1-2YHR055C CCW12Q12127 133 aa0.95□□□□□ -2.26
CUP1-2YHR055C GCY1P14065 312 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
CUP1-2YHR055C YKL102CP34249 101 aa0.93□□□□□ -2.26
CUP1-2YHR055C YRA2P36036 203 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
CUP1-2YHR055C BRX1Q08235 291 aaKnown RBP0.93□□□□□ -2.26
CUP1-2YHR055C RFC2P40348 353 aa0.92□□□□□ -2.26
CUP1-2YHR055C YJR015WP47090 510 aa0.92□□□□□ -2.26
CUP1-2YHR055C GPI17Q04080 534 aa0.92□□□□□ -2.26
CUP1-2YHR055C YOR381W-AQ3E804 55 aa0.92□□□□□ -2.26
CUP1-2YHR055C SEC14P24280 304 aaKnown RBP0.91□□□□□ -2.26
CUP1-2YHR055C HOP2P53187 214 aa0.91□□□□□ -2.26
CUP1-2YHR055C TIM13P53299 105 aa0.91□□□□□ -2.26
CUP1-2YHR055C YKR005CQ02203 525 aa0.91□□□□□ -2.26
CUP1-2YHR055C RIM9Q04734 239 aa0.91□□□□□ -2.26
CUP1-2YHR055C YET3Q07451 203 aa0.91□□□□□ -2.26
CUP1-2YHR055C YOR214CQ12282 236 aa0.91□□□□□ -2.26
CUP1-2YHR055C YPR127WQ06494 345 aa0.9□□□□□ -2.27
CUP1-2YHR055C PRE1P22141 198 aaKnown RBP0.89□□□□□ -2.27
CUP1-2YHR055C YKR070WP36151 352 aaKnown RBP0.89□□□□□ -2.27
CUP1-2YHR055C MOB1P40484 314 aa0.89□□□□□ -2.27
CUP1-2YHR055C SNO1Q03144 224 aa0.89□□□□□ -2.27
CUP1-2YHR055C HPT1Q04178 221 aaKnown RBP0.89□□□□□ -2.27
CUP1-2YHR055C FYV4P38783 130 aaPredicted RBP0.88□□□□□ -2.27
CUP1-2YHR055C NVJ1P38881 321 aa0.88□□□□□ -2.27
CUP1-2YHR055C RAD6P06104 172 aa0.87□□□□□ -2.27
CUP1-2YHR055C APA2P22108 325 aa0.87□□□□□ -2.27
CUP1-2YHR055C YDC1Q02896 317 aa0.87□□□□□ -2.27
CUP1-2YHR055C HRD1Q08109 551 aa0.87□□□□□ -2.27
CUP1-2YHR055C YKR041WP36134 250 aa0.86□□□□□ -2.27
CUP1-2YHR055C SHB17P36136 271 aaKnown RBP0.86□□□□□ -2.27
CUP1-2YHR055C KEI1Q06346 221 aa0.86□□□□□ -2.27
CUP1-2YHR055C YDL157CQ12082 118 aa0.86□□□□□ -2.27
CUP1-2YHR055C HFA1P32874 2273 aa0.86□□□□□ -2.27
CUP1-2YHR055C RIF1P29539 1916 aa0.85□□□□□ -2.27
CUP1-2YHR055C CPR5P35176 225 aa0.85□□□□□ -2.27
CUP1-2YHR055C YNL200CP40165 246 aaKnown RBP0.85□□□□□ -2.27
CUP1-2YHR055C TTI2P47168 421 aa0.85□□□□□ -2.27
CUP1-2YHR055C YGL230CP53074 147 aa0.85□□□□□ -2.27
CUP1-2YHR055C JAC1P53193 184 aa0.85□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 174.3 ms