RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	YNL184C	P53876	108 aa		0.51	□□□□□ -2.33
SPO11	YHL022C	PIR1	Q03178	341 aa		0.51	□□□□□ -2.33
SPO11	YHL022C	DGK1	Q12382	290 aa		0.5	□□□□□ -2.33
SPO11	YHL022C	YMR030W-A	Q3E760	96 aa		0.5	□□□□□ -2.33
SPO11	YHL022C	YLR422W	Q06409	1932 aa		0.5	□□□□□ -2.33
SPO11	YHL022C	NSE4	P43124	402 aa		0.49	□□□□□ -2.33
SPO11	YHL022C	GPI14	P47088	403 aa	Known RBP	0.49	□□□□□ -2.33
SPO11	YHL022C	UPS1	Q05776	175 aa		0.49	□□□□□ -2.33
SPO11	YHL022C	DAS2	Q12084	232 aa		0.49	□□□□□ -2.33
SPO11	YHL022C	DUR1,2	P32528	1835 aa	Known RBP	0.48	□□□□□ -2.33
SPO11	YHL022C	NTG1	P31378	399 aa		0.48	□□□□□ -2.33
SPO11	YHL022C	YHP1	Q04116	353 aa		0.48	□□□□□ -2.33
SPO11	YHL022C	RIF1	P29539	1916 aa		0.47	□□□□□ -2.33
SPO11	YHL022C	MAK31	P23059	88 aa		0.47	□□□□□ -2.33
SPO11	YHL022C	NRK1	P53915	240 aa		0.47	□□□□□ -2.33
SPO11	YHL022C	ELP6	Q04868	273 aa		0.47	□□□□□ -2.33
SPO11	YHL022C	YLR412C-A	Q3E742	68 aa		0.47	□□□□□ -2.33
SPO11	YHL022C	YKR070W	P36151	352 aa	Known RBP	0.46	□□□□□ -2.34
SPO11	YHL022C	NSG1	P38837	291 aa		0.46	□□□□□ -2.34
SPO11	YHL022C	NSA2	P40078	261 aa	Known RBP	0.46	□□□□□ -2.34
SPO11	YHL022C	TMA23	Q03525	211 aa		0.46	□□□□□ -2.34
SPO11	YHL022C	DML1	Q03652	475 aa		0.46	□□□□□ -2.34
SPO11	YHL022C	YOR342C	Q12182	319 aa		0.46	□□□□□ -2.34
SPO11	YHL022C	ATP20	Q12233	115 aa		0.46	□□□□□ -2.34
SPO11	YHL022C	GIS3	Q12418	502 aa		0.46	□□□□□ -2.34
SPO11	YHL022C	YCL012C	Q8J0M4	134 aa		0.46	□□□□□ -2.34
SPO11	YHL022C	IGO2	Q9P305	131 aa		0.46	□□□□□ -2.34
SPO11	YHL022C	SED1	Q01589	338 aa		0.45	□□□□□ -2.34
SPO11	YHL022C	GRX5	Q02784	150 aa		0.45	□□□□□ -2.34
SPO11	YHL022C	RPB4	P20433	221 aa	Predicted RBP	0.44	□□□□□ -2.34
SPO11	YHL022C	MRPS17	Q03246	237 aa	Predicted RBP	0.44	□□□□□ -2.34
SPO11	YHL022C	RNH1	Q04740	348 aa		0.44	□□□□□ -2.34
SPO11	YHL022C	CBF1	P17106	351 aa		0.43	□□□□□ -2.34
SPO11	YHL022C	RRT1	P38192	103 aa		0.43	□□□□□ -2.34
SPO11	YHL022C	CCS1	P40202	249 aa	Known RBP	0.43	□□□□□ -2.34
SPO11	YHL022C	RTC4	P53850	401 aa		0.43	□□□□□ -2.34
SPO11	YHL022C	HHT1	P61830	136 aa		0.43	□□□□□ -2.34
SPO11	YHL022C	YDC1	Q02896	317 aa		0.43	□□□□□ -2.34
SPO11	YHL022C	ARO80	Q04052	950 aa		0.43	□□□□□ -2.34
SPO11	YHL022C	KEI1	Q06346	221 aa		0.43	□□□□□ -2.34
SPO11	YHL022C	ATG41	Q12048	136 aa		0.43	□□□□□ -2.34
SPO11	YHL022C	MATALPHA2	P0CY08	210 aa		0.42	□□□□□ -2.34
SPO11	YHL022C	HMLALPHA2	P0CY09	210 aa		0.42	□□□□□ -2.34
SPO11	YHL022C	YGL230C	P53074	147 aa		0.42	□□□□□ -2.34
SPO11	YHL022C	YPR014C	Q6B0W2	109 aa		0.42	□□□□□ -2.34
SPO11	YHL022C	SHB17	P36136	271 aa	Known RBP	0.41	□□□□□ -2.34
SPO11	YHL022C	CGR1	P53188	120 aa		0.41	□□□□□ -2.34
SPO11	YHL022C	PGA1	P53896	198 aa		0.41	□□□□□ -2.34
SPO11	YHL022C	TIM11	P81449	96 aa	Predicted RBP	0.41	□□□□□ -2.34
SPO11	YHL022C	QCR7	P00128	127 aa		0.4	□□□□□ -2.35
SPO11	YHL022C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.4	□□□□□ -2.35
SPO11	YHL022C	ADE1	P27616	306 aa		0.4	□□□□□ -2.35
SPO11	YHL022C	YKT6	P36015	200 aa	Known RBP	0.4	□□□□□ -2.35
SPO11	YHL022C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.4	□□□□□ -2.35	not detected
SPO11	YHL022C	SBH1	P52870	82 aa		0.4	□□□□□ -2.35
SPO11	YHL022C	CWC21	Q03375	135 aa	Known RBP	0.39	□□□□□ -2.35
SPO11	YHL022C	YOL024W	Q08172	172 aa		0.39	□□□□□ -2.35
SPO11	YHL022C	PRM3	Q08931	133 aa		0.39	□□□□□ -2.35
SPO11	YHL022C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.39	□□□□□ -2.35
SPO11	YHL022C	YOR381W-A	Q3E804	55 aa		0.39	□□□□□ -2.35
SPO11	YHL022C	RAD9	P14737	1309 aa		0.38	□□□□□ -2.35
SPO11	YHL022C	PRE1	P22141	198 aa	Known RBP	0.38	□□□□□ -2.35
SPO11	YHL022C	YCR001W	P25347	104 aa		0.38	□□□□□ -2.35
SPO11	YHL022C	CAF4	P36130	643 aa		0.38	□□□□□ -2.35
SPO11	YHL022C	YHR213W-B	Q8TGK1	99 aa		0.38	□□□□□ -2.35
SPO11	YHL022C	HFA1	P32874	2273 aa		0.38	□□□□□ -2.35
SPO11	YHL022C	TRX3	P25372	127 aa		0.37	□□□□□ -2.35
SPO11	YHL022C	GAL83	Q04739	417 aa		0.37	□□□□□ -2.35
SPO11	YHL022C	NOC4	Q06512	552 aa	Predicted RBP	0.37	□□□□□ -2.35
SPO11	YHL022C	TAH1	P25638	111 aa	Predicted RBP	0.36	□□□□□ -2.35
SPO11	YHL022C	AIM34	Q03673	198 aa		0.36	□□□□□ -2.35
SPO11	YHL022C	HSP30	P25619	332 aa		0.35	□□□□□ -2.35
SPO11	YHL022C	SHG1	P38337	142 aa		0.35	□□□□□ -2.35
SPO11	YHL022C	HHY1	P39982	102 aa		0.35	□□□□□ -2.35
SPO11	YHL022C	HOP2	P53187	214 aa		0.35	□□□□□ -2.35
SPO11	YHL022C	VPS28	Q02767	242 aa		0.35	□□□□□ -2.35
SPO11	YHL022C	RIM9	Q04734	239 aa		0.35	□□□□□ -2.35
SPO11	YHL022C	SHH4	Q06236	168 aa		0.35	□□□□□ -2.35
SPO11	YHL022C	BRX1	Q08235	291 aa	Known RBP	0.35	□□□□□ -2.35
SPO11	YHL022C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.34	□□□□□ -2.36	not detected
SPO11	YHL022C	SEC14	P24280	304 aa	Known RBP	0.34	□□□□□ -2.36
SPO11	YHL022C	FMP32	P43557	207 aa		0.34	□□□□□ -2.36
SPO11	YHL022C	GRX8	Q05926	109 aa		0.34	□□□□□ -2.36
SPO11	YHL022C	MPD1	Q12404	318 aa	Known RBP	0.34	□□□□□ -2.36
SPO11	YHL022C	TRM3	Q07527	1436 aa		0.33	□□□□□ -2.36
SPO11	YHL022C	JIP3	O13555	125 aa		0.33	□□□□□ -2.36
SPO11	YHL022C	CDC39	P25655	2108 aa	Known RBP	0.33	□□□□□ -2.36
SPO11	YHL022C	YKL102C	P34249	101 aa		0.33	□□□□□ -2.36
SPO11	YHL022C	MOB1	P40484	314 aa		0.33	□□□□□ -2.36
SPO11	YHL022C	YKR005C	Q02203	525 aa		0.33	□□□□□ -2.36
SPO11	YHL022C	GPI17	Q04080	534 aa		0.33	□□□□□ -2.36
SPO11	YHL022C	YET3	Q07451	203 aa		0.33	□□□□□ -2.36
SPO11	YHL022C	HRD1	Q08109	551 aa		0.33	□□□□□ -2.36
SPO11	YHL022C	FCY1	Q12178	158 aa		0.33	□□□□□ -2.36
SPO11	YHL022C	UBR1	P19812	1950 aa		0.32	□□□□□ -2.36
SPO11	YHL022C	KIN28	P06242	306 aa		0.32	□□□□□ -2.36
SPO11	YHL022C	AHC2	P25649	128 aa		0.32	□□□□□ -2.36
SPO11	YHL022C	NVJ1	P38881	321 aa		0.32	□□□□□ -2.36
SPO11	YHL022C	RFC2	P40348	353 aa		0.32	□□□□□ -2.36
SPO11	YHL022C	POG1	P40473	351 aa		0.32	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 97.6 ms